Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05] 6,074 sequences; 234,039,246 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq9 152 1e-31 seq2 149 1e-30 seq10 147 5e-30 seq26 132 1e-25 seq1649 131 4e-25 seq14 129 1e-24 seq4 111 4e-19 seq1 86.0 1e-11 >seq9 Length=8984705 Score = 152 bits (168), Expect = 1e-31 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| |||||||| | || ||||| || ||||| || |||||||| Sbjct 7052820 GTTGACTCCTTCTGAATGTTATAGTCTGCAAGGGTTCTGCCATCTTCAAGCTGTTTTCCG 7052761 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||||| |||||| || || || || || || || || ||||||||||| || || Sbjct 7052760 GCAAAAATTAACCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGAATCTTCGCCTTC 7052701 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | |||||| | || ||||||| || || || || ||||| || ||| Sbjct 7052700 ACATTATCGATGGTATCTGAACTCTCCACCTCTAAAGTGATGGTTTTCCCAGTGAGAGTT 7052641 Query 104543 TTTACAAATATCTGCAT 104559 || |||||||||||||| Sbjct 7052640 TTCACAAATATCTGCAT 7052624 Score = 141 bits (156), Expect = 2e-28 Identities = 151/198 (76%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || |||||||| | || ||||| || ||||| || ||||||||| Sbjct 7045930 GTTGACTCCTTCTGGATGTTATAGTCTGCAAGGGTTCTGCCATCTTCAAGCTGTTTTCCA 7045871 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||||| |||||| || || || || || || || || |||||||||||||| || Sbjct 7045870 GCAAAAATTAACCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGAATCTTTGCCTTC 7045811 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGT-AATAGTCTTACCAGTAAGTGT 104541 ||||| || | |||||| | || ||||| | || || || || || || || || Sbjct 7045810 ACATTGTCGATGGTATCCGAACTCTCCACCTCCAAAGTGGATGGTTTTCCCGGTGAGAGT 7045751 Query 104542 TTTTACAAATATCTGCAT 104559 ||| |||||||||||||| Sbjct 7045750 TTTCACAAATATCTGCAT 7045733 Score = 140 bits (154), Expect = 7e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || ||||| || ||||| || || | || || || || || || | ||||| ||| Sbjct 7053048 GTTGACTCTTTTTGGATATTGTAATCTGCAAGTGTCCTCCCATCCTCCAACTGTTTGCCA 7052989 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || |||||||||||||| ||||| || ||||| || ||||| ||||| |||||| Sbjct 7052988 GCAAATATCAGCCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATCTTAGCTTTT 7052929 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | |||||| | || || || | ||||||||||| ||||| || || Sbjct 7052928 ACATTGTCAATGGTATCAGAACTCTCAACTTCCAAGGTAATAGTCTTTCCAGTGAGGGTC 7052869 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 7052868 TTGACAAAAATTTGCAT 7052852 Score = 138 bits (152), Expect = 3e-27 Identities = 171/233 (73%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | ||| || || || | || || || ||||| ||||| || ||| Sbjct 7052625 ATGCCACCCCTAAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGGATATTGTAATCA 7052566 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | || || ||||| ||||| |||||||| || ||||||||||| || || Sbjct 7052565 GCAAGGGTGCGGCCATCCTCTAGCTGTTTACCAGCAAAGATAAGCCTCTGTTGGTCTGGC 7052506 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC---GCTAGGT 104506 || || || || || || || ||||| ||||| ||||| || | || || ||| | Sbjct 7052505 GGGATCCCCTCCTTGTCTTGGATCTTGGCTTTGACATTATCAATAGTGTCAGAGCT---T 7052449 Query 104507 TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || || || ||||| |||||||| ||||| ||||| |||||||| Sbjct 7052448 TCCACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTTTTCACAAAGATCTGCAT 7052396 Score = 129 bits (142), Expect = 1e-24 Identities = 158/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| | || || || ||||| ||||| ||||||| ||||| | ||| || Sbjct 7046625 AAGGACCAGATGCAGGGTGGACTCCTTCTGGATATTGTAGTCAGCCAGAGTGCGACCATC 7046566 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || | | | || |||||||| || | |||||| || || ||||| || || || || || Sbjct 7046565 CTCCAAT-GCTTGCCAGCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTC 7046507 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||||||||| ||||| || | || || || ||| ||||| || || || || Sbjct 7046506 CTGAATCTTTGCTTTCACATTGTCAATCGTGTC-TGAGCTTCAACCTCCAGGGTGATGGT 7046448 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| | || || | |||||||||||| Sbjct 7046447 TTTCCCAGTCAAGGTCTTGAAAAATATCTGCAT 7046415 Score = 123 bits (136), Expect = 6e-23 Identities = 159/214 (74%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| | || || || ||||| ||||| ||||||| ||||| | ||| || Sbjct 7053516 AAGGACAAGATGCAGGGTGGACTCCTTCTGGATATTGTAGTCAGCCAGAGTGCGACCATC 7053457 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || | || || |||||||| || | |||||| || || ||||| || ||| ||| || Sbjct 7053456 CTCCAACTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCTCCTTG-TC 7053398 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 ||||||||||||||| ||||| || | || || || | || ||||| || || || | Sbjct 7053397 CTGAATCTTTGCTTTCACATTGTCAATCGTGTC-TGAGCTCTCAACCTCCAGGGTGATGG 7053339 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | || ||| ||| || || |||||||||||||| Sbjct 7053338 TTTTCCCATCAAG-GTCTTGACAAATATCTGCAT 7053306 Score = 116 bits (128), Expect = 9e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || ||||| || ||||| || || | || || || || || || | ||||| || Sbjct 7046158 GTTGACTCTTTTTGGATATTGTAATCTGCAAGTGTCCTCCCATCCTCCAACTGTTTGCCG 7046099 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || |||||||||||||| ||||| || ||||| || ||||| ||||| |||||| Sbjct 7046098 GCAAATATCAGCCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATCTTAGCTTTT 7046039 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | |||||| | || || || | ||||||||||| |||| || | Sbjct 7046038 ACATTGTCAATGGTATCAGAACTCTCAACTTCCAAGGTAATAGTCTT-TCAGTGAGGGGC 7045980 Query 104543 TTTACA-AATATCTGCAT 104559 || ||| || || ||||| Sbjct 7045979 TTGACACAAAATTTGCAT 7045962 Score = 102 bits (112), Expect = 2e-16 Identities = 167/233 (72%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | | || | ||| | || || || || || || |||||||| Sbjct 7053307 ATCCCTCCTCTAAGGCGCAAAACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAGTCT 7053248 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || || || ||||| || || || ||||||||||| | ||| ||||| ||||| Sbjct 7053247 GCAAGTGTCCT-CCATCTTCAAGCTGCTTCCCAGCAAAAATCAACCTTTGTTGGTCAGGT 7053189 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTA-CGGTATCGCTAGGT-T 104507 || || || || ||||| || ||||| ||||| || || || | ||| || || | | Sbjct 7053188 GGGATACC-TCCTTATCTTGGATCTTGGCTTTGACGTTGTCAATTGGTGTC-AGAGCTCT 7053131 Query 104508 CTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 | ||||| | ||||| || |||||||| | || || ||||| ||||||||| Sbjct 7053130 CCACCTCCAAAGTAATGGTTTTACCAGTCAAGGTCTTCACAAA-ATCTGCATT 7053079 Score = 100 bits (110), Expect = 7e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| || || ||||| | || | || | || || || || ||||| ||||| || | Sbjct 1646380 TTCCTCCCCTAAGCCTCAAAACCAAGTGAAGAGTCGACTCCTTTTGAATGTTATAATCTG 1646439 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 ||||||| ||| ||||| || ||||| || |||||||| | ||||| |||||||||| Sbjct 1646440 CAAGAGTTCGACCTTCTTCAAGCTGTTTGCCCGCAAAAATCAATCTCTGCTGATCAGGAG 1646499 Query 104451 GTATTCCTTCTTTATCCT 104468 | |||||||| ||||||| Sbjct 1646500 GGATTCCTTCCTTATCCT 1646517 Score = 100 bits (110), Expect = 7e-16 Identities = 141/197 (72%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || ||||| || || || | || || | || || | || || || ||| Sbjct 7042435 GTTGACTCCTTTTGAATGTTGTAATCTGCAAGGGTCTTCCCATCCTTAAGCTGCTTACCA 7042376 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| |||||||| || || ||||| || ||||| || || ||||| || || || Sbjct 7042375 GCAAAAATAAGCCTCTGCTGGTCTGGAGG-ATACCTTCATTGTCTTGAATTTTGGCCTTG 7042317 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || || || | | ||| || | | ||||| ||||||||||| || || Sbjct 7042316 ACATTGTCAACTGTGTTGGAGCTTTCAACTTGCAAAGTAATGGTCTTACCAGTCAGCGTC 7042257 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 7042256 TTCACAAAAATCTGCAT 7042240 Score = 100 bits (110), Expect = 7e-16 Identities = 148/201 (74%), Gaps = 13/201 (6%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||| |||| || |||| || || | || || ||||| |||| ||| Sbjct 7045702 GTGGACTCCTTCTGA-TATTGTAATCAGCAAGGGTGCGGCCATCCTCTAGCTGTTA-CCA 7045645 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || ||||||||||| || || || | ||| |||| ||| ||||| ||||| Sbjct 7045644 GCAAAGATAAGCCTCTGTTGGTCTGGCGGGA-TCCCTCTT--GTCTGGATCTTGGCTTTG 7045588 Query 104483 ACATTTTC---TACGGT-ATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAG 104538 ||||| || || || | ||| ||| ||||| || || || ||||| |||||||| Sbjct 7045587 ACATTATCACATAGTGTCAGAGCT---TTCCACCTCGAGGGTGATGGTCTTGCCAGTAAG 7045531 Query 104539 TGTTTTTACAAATATCTGCAT 104559 ||||| ||||| |||||||| Sbjct 7045530 -GTTTTCACAAAGATCTGCAT 7045511 Score = 91.5 bits (100), Expect = 3e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| || || ||||| | || | || | || || || || || || ||||| || | Sbjct 1708111 TTCCTCCCCTAAGCCTCAAAACCAAGTGAAGAGTCGACTCCTTTTGGATGTTATAATCTG 1708170 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 ||||||| ||| ||||| || || || ||||||||||||| ||||| |||||| ||| Sbjct 1708171 CAAGAGTTCGACCATCTTCAAGCTGCTTACCAGCAAAAATTAATCTCTGCTGATCAAGAG 1708230 Query 104451 GTATTCCTTCTTTATCCT 104468 | |||||||| || |||| Sbjct 1708231 GGATTCCTTCCTTGTCCT 1708248 >seq2 Length=14367614 Score = 149 bits (164), Expect = 1e-30 Identities = 146/186 (78%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 104375 TGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGC 104434 || || |||||||||| ||| || | ||||||||| || ||||| |||||||| || ||| Sbjct 9074461 TGGATGTTATAGTCAGCTAGGGTGCGACCGTCTTCAAGCTGTTTGCCAGCAAAGATAAGC 9074402 Query 104435 CTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACG 104494 || |||||||||||||| |||||||| || || || ||||| ||||| ||||| || | Sbjct 9074401 CTTTGTTGATCAGGAGGGATTCCTTCCTTGTCTTGGATCTTAGCTTTGACATTATCAATT 9074342 Query 104495 GTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATAT 104553 ||||| || | || ||||| | || |||||||| || || ||||| || ||||| || Sbjct 9074341 GTATC-AGAGCTCTCAACCTCCAAGGTGATAGTCTTTCCTGTGAGTGTCTTGACAAAGAT 9074283 Query 104554 CTGCAT 104559 ||||| Sbjct 9074282 TTGCAT 9074277 Score = 149 bits (164), Expect = 1e-30 Identities = 151/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 |||||||| || || ||||||||||||| |||||||| || ||||| || || || ||| Sbjct 9074929 GTAGATTCCTTTTGGATATTATAGTCAGCGAGAGTTCTCCCATCTTCAAGCTGCTTGCCA 9074870 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || ||||| || || || || || || || || ||||| || |||||||| || Sbjct 9074869 GCAAAGATAAGCCTTTGCTGGTCTGGTGGGATACCCTCCTTATCTTGGATCTTTGCCTTC 9074810 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | |||||| | || ||||| | ||| |||||||| || ||||| || Sbjct 9074809 ACATTATCAATGGTATCTGAACTCTCAACCTCCAATGTGATAGTCTTTCCCGTAAGAGTC 9074750 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 9074749 TTCACAAAAATTTGCAT 9074733 Score = 145 bits (160), Expect = 2e-29 Identities = 162/214 (76%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| || || ||||| ||||| || || ||||| | ||||| || || || Sbjct 9075173 AAGAACAAGATGCAAGGTGGATTCCTTCTGGATGTTGTAGTCTGCCAGAGTCCTCCCATC 9075114 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || ||||||||||| | |||||| || || ||||| || ||||| || || Sbjct 9075113 CTCCAGCTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGGATCCCTTCCTTGTC 9075054 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTT-CTACCTCTAGTGTAATAG 104525 ||| |||||||| || ||||| || | ||| || | || || | ||||| | ||| | | Sbjct 9075053 CTGGATCTTTGCCTTCACATTATCAATGGTGTC-CGAGCTTTCAACCTCCAATGTTACTG 9074995 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||| ||||| | || || |||||||||||||| Sbjct 9074994 TCTTTCCAGTCAAGGTCTTCACAAATATCTGCAT 9074961 Score = 140 bits (154), Expect = 7e-28 Identities = 164/219 (75%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 |||| ||| || | || | || || || ||||| || |||||||||| ||| |||| Sbjct 9074038 AGCCGAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGCTAGGGTTCGG 9073979 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || ||||| || ||||| ||||||||||| ||||| || || || ||||| |||||||| Sbjct 9073978 CCATCTTCAAGCTGTTTGCCAGCAAAAATAAGCCTTTGCTGGTCGGGAGGGATTCCTTCC 9073919 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGT 104520 || || || ||||| || || ||||| || | || || || | || ||||| || || Sbjct 9073918 TTGTCTTGGATCTTAGCCTTGACATTGTCAATAGTGTC-AGAGCTCTCAACCTCAAGGGT 9073860 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || ||||| ||||| ||||| || ||||| Sbjct 9073859 GATGGTCTTGCCTGTAAGGGTTTTCACAAAGATTTGCAT 9073821 Score = 140 bits (154), Expect = 7e-28 Identities = 161/214 (75%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || | ||| | || || || ||||| || |||||||||| ||| |||| || || Sbjct 9074261 AAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGCTAGGGTTCGGCCATC 9074202 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| || ||||| ||||||||||| ||||| ||||| |||||||| |||||||| || || Sbjct 9074201 TTCAAGCTGTTTGCCAGCAAAAATAAGCCTTTGTTGGTCAGGAGGGATTCCTTCCTTGTC 9074142 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 || ||||| || || ||||| || | || || || | || ||||| | || |||| Sbjct 9074141 TTGGATCTTAGCCTTGACATTATCAATAGTGTC-AGAGCTCTCAACCTCCAAGGTGATAG 9074083 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||| || || || || || ||||| || ||||| Sbjct 9074082 TCTTTCCTGTGAGAGTCTTGACAAAGATTTGCAT 9074049 Score = 134 bits (148), Expect = 3e-26 Identities = 150/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || ||||| ||||| |||| || || || || ||||| |||||||||||| Sbjct 9074701 GTTGACTCCTTTTGAATGTTATAATCAGCAAGTGTCCTTCCATCTTCAAGTTGTTTTCCA 9074642 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| | |||||| || || || || || || ||||||||||||||||| || || Sbjct 9074641 GCAAAAATCAACCTCTGCTGGTCTGGTGGGATACCCTCTTTATCCTGAATCTTGGCCTTG 9074582 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | || || || | |||||||| | || || || ||||| || || || Sbjct 9074581 ACATTGTCAATAGTGTC-TGAGCTCTCTACCTCCAAAGTGATCGTTTTACCTGTGAGAGT 9074523 Query 104542 TTTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 9074522 CTTGACAAAGATTTGCAT 9074505 Score = 113 bits (124), Expect = 1e-19 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390 |||| || || ||||| | || || || | ||| || || || || || ||||| |||| Sbjct 7189432 TTCCTCCCCTAAGCCTCAAAACAAGGTGAAGTGTGGACTCCTTTTGGATGTTATAATCAG 7189373 Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450 ||||||| || ||||| || || || ||||||||||| | |||||| |||||||||| Sbjct 7189372 CAAGAGTTCGGCCATCTTCCAGCTGCTTACCAGCAAAAATCAACCTCTGCTGATCAGGAG 7189313 Query 104451 GTATTCCTTCTTTATCCTGAAT 104472 | || |||||||||||||| || Sbjct 7189312 GGATGCCTTCTTTATCCTGGAT 7189291 Score = 86.0 bits (94), Expect = 1e-11 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 104466 CCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAG 104525 |||||||||| ||||| ||||| || | ||| || || || ||||| || ||||||| Sbjct 7188691 CCTGAATCTTGGCTTTGACATTGTCGATGGTGTCACTGCTCTCGACCTCGAGGGTAATAG 7188632 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 |||| || || || ||||| |||||||||||||| || Sbjct 7188631 TCTTCCCCGTTAGGGTTTTGACAAATATCTGCATCTT 7188595 >seq10 Length=8461613 Score = 147 bits (162), Expect = 5e-30 Identities = 161/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | ||||| ||||||||||| ||||| |||| || ||| || || || Sbjct 2238581 AAGAACAAGGTGAAGGGTAGACTCTTTCTGAATGTTATAATCAGCTAAAGTCCTCCCATC 2238640 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || | |||||| || ||||| || ||||| || ||||| || || |||||||| ||||| Sbjct 2238641 CTCCAATTGTTTCCCGGCAAAGATAAGCCTTTGCTGATCTGGGGGGATTCCTTCCTTATC 2238700 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 |||||||||||| || || || || | ||||| | ||| ||||| | || || || Sbjct 2238701 CTGAATCTTTGCCTTGACGTTATCGATTGTATCCGAACTTTCCACCTCCAAGGTGATTGT 2238760 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 || ||||| | || || ||||| ||||||||| Sbjct 2238761 TTTTCCAGTCAAGGTCTTGACAAAAATCTGCATT 2238794 >seq26 Length=2022356 Score = 132 bits (146), Expect = 1e-25 Identities = 361/553 (65%), Gaps = 0/553 (0%) Strand=Plus/Plus Query 268734 TATGGAGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGT 268793 ||||| |||||||| | |||| || || |||||||| | |||||||| ||||| | Sbjct 1746154 TATGGGAAATGTACAAGAAAGCCGAAGCCTCCTTTTGGACCGCCGAAGAAGTCGATCTCT 1746213 Query 268794 CTTATGACTTAATAGATTGGAAAAATTTAAAACCAGAAGAAAGAAGATTTATATCTTATA 268853 | | || || | ||| ||| | | | | ||| | || || || | Sbjct 1746214 CGTCGGATCTACGCCACTGGGAAACTCTTACCGACGGCGAACGCCACTTCATCACTCACG 1746273 Query 268854 TTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCT 268913 | || || || ||||||| ||||||||||| ||||||||| | | |||| Sbjct 1746274 TCCTCGCCTTCTTTGCAGCCTCCGATGGTATCGTCCTCGAAAATCTCGCCGTCCGGTTCA 1746333 Query 268914 GTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAA 268973 | || || || || | || || | || || || ||||| || || || |||| Sbjct 1746334 TGAAGGAAGTCCAAATCTCCGAGGCTCGTGCGTTCTATGGCTTCCAAATCGCCATCGAAA 1746393 Query 268974 ATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAA 269033 |||| || || |||||||| ||||| | | || ||||| || | || |||||||| Sbjct 1746394 ATATCCACTCCGAGATGTATAGTCTCCTCCTTGAAACTTACATCAAGGACTCCAACGAAA 1746453 Query 269034 AGAAAAGACTATTTTCTTCTATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGG 269093 |||| | || || | | ||| || |||||| || ||| |||| |||| Sbjct 1746454 AGAACCGGCTCTTCCACGCCGTCGAAACAGTGCCATGTGTGGCTAAGAAAGCTGAGTGGG 1746513 Query 269094 CTCTGAAATGGATAAACGATAGCGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTG 269153 | |||||||||| ||| | | ||| || ||| || || | |||||||| | Sbjct 1746514 CATTGAAATGGATCGACGGTTCGGAAACTTTCGCCGAACGGCTAATCGCTTTTGCTTGCG 1746573 Query 269154 TAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCC 269213 | ||||| || ||||| || || ||| ||| || |||||||| || || | || Sbjct 1746574 TGGAAGGGATTTTCTTCTCTGGAAGTTTCTGCGCGATATTTTGGTTAAAAAAGCGCGGGT 1746633 Query 269214 TTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCG 269273 | ||||| |||||||||||||| ||||| || || | || |||||| | || |||| Sbjct 1746634 TAATGCCTGGATTAACTTTCTCAAACGAGTTAATCTCACGAGATGAAGGTCTCCATTGCG 1746693 Query 269274 ACTTCGCTTGTTT 269286 | |||||||| || Sbjct 1746694 ATTTCGCTTGCTT 1746706 >seq1649 Length=3542 Score = 131 bits (144), Expect = 4e-25 Identities = 159/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| | || || || ||||| ||||| ||||||| ||||| | ||| || Sbjct 1024 AAGGACAAGATGCAGGGTGGACTCCTTCTGGATATTGTAGTCAGCCAGAGTGCGACCATC 965 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || | || || |||||||| || | |||||| || || ||||| || || || || || Sbjct 964 CTCCAACTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTC 905 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAG 104525 ||||||||||||||| ||||| || | || || || | || ||||| || || || | Sbjct 904 CTGAATCTTTGCTTTCACATTGTCAATCGTGTC-TGAGCTCTCAACCTCCAGGGTGATGG 846 Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | || ||||| | || || |||||||||||||| Sbjct 845 TTTTCCCAGTCAAGGTCTTGACAAATATCTGCAT 812 Score = 122 bits (134), Expect = 2e-22 Identities = 130/172 (76%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || ||||| || ||||| || || | || || || || || || | ||||| ||| Sbjct 552 GTTGACTCTTTTTGGATATTGTAATCTGCAAGTGTCCTCCCATCCTCCAACTGTTTGCCA 493 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || |||||||||||||| ||||| || ||||| || ||||| ||||| |||||| Sbjct 492 GCAAATATCAGCCTCTGTTGATCTGGAGGGATACCTTCCTTGTCCTGGATCTTAGCTTTT 433 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAG 104534 ||||| || | |||||| | || || || | ||||||||||| |||| Sbjct 432 ACATTGTCAATGGTATCAGAACTCTCAACTTCCAAGGTAATAGTCTTTCCAG 381 Score = 114 bits (126), Expect = 3e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || ||||| || | | || | ||| | || || || || || || |||||||| Sbjct 813 ATCCCTCCTCTAAGGCGCAAAACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAGTCT 754 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || || || ||||| || || || ||||||||||| | ||| ||||| ||||| Sbjct 753 GCAAGTGTCCTCCCATCTTCAAGCTGCTTCCCAGCAAAAATCAACCTTTGTTGGTCAGGT 694 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TC 104508 || || || || ||||| || ||||| ||||| || || || | || || || | || Sbjct 693 GGGATACCCTCCTTATCTTGGATCTTGGCTTTGACGTTGTCAATTGTGTC-AGAGCTCTC 635 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 ||||| | ||||| || |||||||| | || || ||||| ||||||||| Sbjct 634 CACCTCCAAAGTAATGGTTTTACCAGTCAAGGTCTTCACAAAAATCTGCATT 583 Score = 96.9 bits (106), Expect = 8e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | ||| || || || | || || || ||||| ||||| || ||| Sbjct 166 ATGCCACCCCTAAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGGATATTGTAATCA 107 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 | || || | || || ||||| ||||| |||||||| || ||||||||||| || || Sbjct 106 GCAAGGGTGCGGCCATCCTCTAGCTGTTTACCAGCAAAGATAAGCCTCTGTTGGTCTGGC 47 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTC 104490 || || || || || || || ||||| ||||| ||||| || Sbjct 46 GGGATCCCCTCCTTGTCTTGGATCTTGGCTTTGACATTATC 6 >seq14 Length=6982396 Score = 129 bits (142), Expect = 1e-24 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||||||||| || |||| | ||| || || ||||| | ||| || ||| Sbjct 1119820 GTGGACTCCTTCTGAATATTGTAATCAGCCAAAGTCCTTCCATCTTCCAATTGCTTCCCA 1119879 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| | ||| || ||||| || || || ||||| || |||||||||||||| || Sbjct 1119880 GCAAAAATCAACCTTTGCTGATCTGGTGGAATCCCTTCCTTGTCCTGAATCTTTGCCTTA 1119939 Query 104483 ACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 ||||| || | ||||| | || | || ||||| | ||||| || || || || || || Sbjct 1119940 ACATTATCAATCGTATC-CGAGCTCTCCACCTCCAAAGTAATGGTTTTCCCTGTCAGAGT 1119998 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 1119999 CTTGACGAAAATCTGCAT 1120016 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 ||||| | || | ||| | || || ||||||||||| ||||| |||| | ||||| | Sbjct 1120027 AGCCTCAAAACCAAATGAAGGGTCGACTCTTTCTGAATGTTATAATCAGCCAAAGTTCGA 1120086 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 ||||| || || || || || ||||| || ||||| || ||||| || || |||||||| Sbjct 1120087 CCGTCCTCGAGCTGCTTCCCTGCAAAGATAAGCCTTTGCTGATCTGGCGGAATTCCTTCC 1120146 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || ||||| ||||| || || || || || | ||| ||| | ||| || || | || Sbjct 1120147 TTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAACTTTCAACTTCCAAGGTT 1120206 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| || || || || ||||| || ||||| Sbjct 1120207 ATGGTTTTACCCGTCAGGGTCTTGACAAAGATTTGCAT 1120244 Score = 98.7 bits (108), Expect = 2e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || || || || || || | | ||||| ||||| || ||||| || ||| Sbjct 1120276 GTTGACTCCTTTTGGATGTTGTAATCCGCCAAAGTTCGGCCGTCCTCGAGTTGCTTCCCA 1120335 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || ||||| || || || || || ||||||||||| ||||| ||||| || || Sbjct 1120336 GCAAAGATAAGCCTTTGCTGGTCCGGGGGAATTCCTTCTTTGTCCTGGATCTTGGCCTTC 1120395 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| ||| ||| || || | || || || || || || || || Sbjct 1120396 ACGTTGTCGATGGTGTCGGAGCTTTCAACTTCCAAGGTTATGGTTTTGCCCGTCAGGGTC 1120455 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| || ||||| Sbjct 1120456 TTGACAAAGATTTGCAT 1120472 >seq4 Length=12062019 Score = 111 bits (122), Expect = 4e-19 Identities = 157/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 ||||| || || | || ||||| || || ||||| || || | || |||| |||||| Sbjct 4154432 AGTACCAGGTGGAGAGTCGATTCCTTTTGGATATTGTAATCCGCAAGGGTTCGGCCGTCT 4154373 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || ||||| || || || || || | | ||||||||||||||| || ||||| || || Sbjct 4154372 TCAAGTTGCTTGCCGGCGAAGATCAAGCGCTGTTGATCAGGAGGAATGCCTTCCTTGTCT 4154313 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGT 104526 || ||||| || || || || || | ||| || || | || ||||| || || || || Sbjct 4154312 TGGATCTTGGCCTTGACGTTGTCGATGGTGTC-TGAGCTCTCCACCTCGAGGGTGATGGT 4154254 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGT 104564 || || || | ||||| || || |||||||| |||| Sbjct 4154253 TTTGCCGGTTAAGGTTTTCACGAAGATCTGCATCTTGT 4154216 >seq1 Length=15579451 Score = 86.0 bits (94), Expect = 1e-11 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 104451 GTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTA 104510 |||| ||||| || ||||| ||||| || || || || || | || ||||| | ||| | Sbjct 5564100 GTATACCTTCCTTGTCCTGGATCTTAGCCTTAACGTTGTCGATAGTGTCGCTGGATTCGA 5564159 Query 104511 CCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 ||||||| || || ||||| || || || ||||| || || ||||||||||| Sbjct 5564160 CCTCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATTTT 5564211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151308794578392