Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05] 6,074 sequences; 234,039,246 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq8 89.7 5e-13 >seq8 Length=9139585 Score = 89.7 bits (98), Expect = 5e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 20239 ACCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAAC 20298 |||| ||||||||||| ||| | || ||||| | ||| ||||||||||| || || Sbjct 6469028 ACCACAAACATGAGCAATCATGCATGTCAAGAGAGCATAAGATGCAATGTTAAATGGCAC 6469087 Query 20299 TCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTAC 20358 ||||| |||||||| | || | |||||||| ||||| || | ||| |||| ||||| Sbjct 6469088 GCCCAATCCCATGTCAGCAGAGCGCTGATACATTTGACATGATAACTCCCCGTACGCTAC 6469147 Query 20359 ATAAAATTG 20367 ||| || || Sbjct 6469148 ATAGAACTG 6469156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441339288770160