Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05] 6,074 sequences; 234,039,246 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq14 86.0 5e-12 >seq14 Length=6982396 Score = 86.0 bits (94), Expect = 5e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 33897 GAAACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATC 33956 |||||| || | || |||| ||||| ||||| ||| |||||||||||| |||||||| Sbjct 1119786 GAAACCACCACGAAGGCGCAAGACCAGGTGAAGGGTGGACTCCTTCTGAATATTGTAATC 1119845 Query 33957 TGCCAATTGTCGCT-CGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCA 34015 ||||| ||| | | || ||||||||||| || ||||| |||| | |||||||| Sbjct 1119846 AGCCAA-AGTCCTTCCATCTTCCAATTGCTTCCCAGCAAAAATCAACCTTTGCTGATCTG 1119904 Query 34016 CCGGCACGCTCTCTTTGTCCATAATTTTTTGCTTAA 34051 || | | || |||||| ||| ||| ||||| Sbjct 1119905 GTGGAATCCCTTCCTTGTCCTGAATCTTTGCCTTAA 1119940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397033006711348