Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05] 6,074 sequences; 234,039,246 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq5 134 3e-26 seq13 122 2e-22 seq10 122 2e-22 seq4 120 7e-22 seq1649 111 4e-19 seq2 111 4e-19 seq9 104 6e-17 seq14 93.3 1e-13 >seq5 Length=11097736 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| | || ||||| |||| ||| ||| || ||||| || |||||||| Sbjct 4357032 CCACCCCTGAGACGGAGAACGAGGTGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGCT 4356973 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| |||||||| | || || || |||||||| ||||| || || ||| Sbjct 4356972 AAGGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCCGGCGGG 4356913 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| || || ||||| || ||||| || || || || | || ||||| || Sbjct 4356912 ATTCCTTCCTTGTCTTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGGATTCGACC 4356853 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || |||||||| || || || |||||||| |||||||| Sbjct 4356852 TCGAGGGTTATGGTCTTCCCCGTTAGGGTTTTGACGAAGATCTGCAT 4356806 >seq13 Length=7441454 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || || || | ||| || || ||||| ||||||||||| Sbjct 4972704 CCACCGCGGAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGCT 4972645 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| | || || || ||||| || ||||| ||||| |||| Sbjct 4972644 AGGGTCCGGCCGTCTTCAAGCTGCTTGCCGGCGAATATGAGACGTTGTTGGTCCGGTGGG 4972585 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || || ||||| || || || ||||| || || | ||| ||||| || Sbjct 4972584 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCGACC 4972525 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | || || ||||| || || || || || ||||| |||||||| Sbjct 4972524 TCCAAGGTTATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 4972478 >seq10 Length=8461613 Score = 122 bits (134), Expect = 2e-22 Identities = 144/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| ||||| || || | || || ||||| || | ||||| || |||||| Sbjct 2239059 TCCTTTTGGATGTTATAATCAGCCAAAGTACGGCCGTCCTCCAGCTGTTTCCCGGCGAAG 2239118 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || |||||||| ||||| ||||| || ||||||||||| || || ||||| Sbjct 2239119 ATGAGCCGCTGTTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATTTTGGCCTTGACGTTG 2239178 Query 288403 TCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | ||| ||| || |||||||| ||||| || || ||||||| ||| ||| Sbjct 2239179 TCAATCGTGTCGGAACTC---TCGACTTCGAGGGTGATGGTTTTGCCGGTCAAAGTTTTG 2239235 Query 288460 ACGAATATCTGCAT 288473 ||||| || ||||| Sbjct 2239236 ACGAAGATTTGCAT 2239249 Score = 105 bits (116), Expect = 2e-17 Identities = 167/237 (70%), Gaps = 12/237 (5%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| ||||| | ||| || || |||| || ||||| || || ||||| || Sbjct 2238564 TGCCCACCACGGAGACGAAGAACAAGGTGAAGGGTAGACTCTTTCTGAATGTTATAATCA 2238623 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 || | || | || || || |||||||| || || ||||| || | || ||| ||| Sbjct 2238624 GCTAAAGTCCTCCCATCCTCCAATTGTTTCCCGGCAAAGATAAGCCTTTGCTGA---TCT 2238680 Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA- 288419 ||| |||||||| |||||||| || || || || ||||| || || | ||| ||| Sbjct 2238681 GGGGGGATTCCTTCCTTATCCTGAATCTTTGCCTTGACGTTATCGATTGTATC---CGAA 2238737 Query 288420 --TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| || || | ||||| || || || |||| |||||||| || ||||||||| Sbjct 2238738 CTTTCCACCTCCAAGGTGATTGTTTTTCCAGTCAAGGTCTTGACAAAAATCTGCATT 2238794 >seq4 Length=12062019 Score = 120 bits (132), Expect = 7e-22 Identities = 169/236 (72%), Gaps = 6/236 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | ||||| || || | || ||| ||||||||||| || || || Sbjct 4154447 CCGCCACGGAGACGGAGTACCAGGTGGAGAGTCGATTCCTTTTGGATATTGTAATCCGCA 4154388 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| | ||| || || |||||||||| ||||||||| | || Sbjct 4154387 AGGGTTCGGCCGTCTTCAAGTTGCTTGCCGGCGAAGATCAAGCGCTGTTGATCAGGAGGA 4154328 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| || || ||||| || || || ||||| || || | || |||| || Sbjct 4154327 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTC---TCC 4154271 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTT 288479 || ||||| ||||| || || ||||| | || || ||||| |||||||| |||| Sbjct 4154270 ACCTCGAGGGTGATGGTTTTGCCGGTTAAGGTTTTCACGAAGATCTGCATCTTGTT 4154215 Score = 118 bits (130), Expect = 3e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| || || || || |||| ||| || || |||||||| || || || Sbjct 4154903 CCTCCACGGAGCCTCAGCACAAGGTGAAGAGTGGACTCCTTCTGGATATTGTAATCCGCA 4154844 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||||| || || || || || ||||| |||| | ||| ||| ||| Sbjct 4154843 AGGGTCCTGCCGTCCTCCAACTGCTTCCCGGCGAATATCAACCTCTGCTGATCCGGAGGG 4154784 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA---TTCT 288423 || ||||| |||||||||||||| || || ||||| || || | ||| ||| ||| Sbjct 4154783 ATCCCTTCCTTATCCTGGATTTTTGCCTTGACGTTATCAATTGTATC---CGAACTCTCT 4154727 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || |||||||||| || |||||||| |||||||| Sbjct 4154726 ACCTCCAGAGTAATAGTTTTCCCGGTCAAGGTTTTGACGAAAATCTGCAT 4154677 >seq1649 Length=3542 Score = 111 bits (122), Expect = 4e-19 Identities = 166/233 (71%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || ||||| | ||| || || |||||||| ||||| || Sbjct 1038 CCACCACGGAGGCGAAGGACAAGATGCAGGGTGGACTCCTTCTGGATATTGTAGTCAGCC 979 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || || || || || || ||||||| | ||| || ||||| Sbjct 978 AGAGTGCGACCATCCTCCAACTGCTTGCCAGCAAAGATCAACCTCTGCTGG---TCTGGA 922 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || || || || ||||| || || |||||||| || || || | || |||| Sbjct 921 GGAATCCCCTCCTTGTCCTGAATCTTTGCTTTCACATTGTCAATCGTGTCTGAGCTC--- 865 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| || ||||| |||| |||||||| ||||||||||| Sbjct 864 TCAACCTCCAGGGTGATGGTTTTCCCAGTCAAGGTCTTGACAAATATCTGCAT 812 >seq2 Length=14367614 Score = 111 bits (122), Expect = 4e-19 Identities = 138/188 (73%), Gaps = 6/188 (3%) Strand=Plus/Minus Query 288289 TGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGA 288348 ||||| |||||||| || || ||||| |||||||| | ||||| || || ||||| || Sbjct 9074461 TGGATGTTATAGTCAGCTAGGGTGCGACCGTCTTCAAGCTGTTTGCCAGCAAAGATAAGC 9074402 Query 288349 CGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATA 288408 | |||||| | ||||||||||| || || ||||| || ||||| || || || || Sbjct 9074401 CTTTGTTGATCAGGAGGGATTCCTTCCTTGTCTTGGATCTTAGCTTTGACATTATCAATT 9074342 Query 288409 GAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAAT 288465 | ||| |||| || || || | ||||| ||||| || || || |||||||| || Sbjct 9074341 GTATCAGAGCTC---TCAACCTCCAAGGTGATAGTCTTTCCTGTGAGTGTCTTGACAAAG 9074285 Query 288466 ATCTGCAT 288473 || ||||| Sbjct 9074284 ATTTGCAT 9074277 Score = 105 bits (116), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | ||| | ||| || || ||||| |||||||| || Sbjct 9074275 CCACCACGGAGACGAAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGCT 9074216 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| | ||||| || || || || || | ||||| | ||| Sbjct 9074215 AGGGTTCGGCCATCTTCAAGCTGTTTGCCAGCAAAAATAAGCCTTTGTTGGTCAGGAGGG 9074156 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 |||||||| || || ||||| || || || || || || |||| || |||| || Sbjct 9074155 ATTCCTTCCTTGTCTTGGATCTTAGCCTTGACATTATCAATAGTGTCAGAGCTC---TCA 9074099 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||| ||||| || || ||||||||||| || || ||||| Sbjct 9074098 ACCTCCAAGGTGATAGTCTTTCCTGTGAGAGTCTTGACAAAGATTTGCAT 9074049 Score = 104 bits (114), Expect = 6e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || ||||| || || || || | ||| ||||| | ||||||||| || || Sbjct 9074695 TCCTTTTGAATGTTATAATCAGCAAGTGTCCTTCCATCTTCAAGTTGTTTTCCAGCAAAA 9074636 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| || |||||| || ||||||||||| || || || || || || Sbjct 9074635 ATCAACCTCTGCTGGTCTGGTGGGATACCCTCTTTATCCTGAATCTTGGCCTTGACATTG 9074576 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || |||| || |||| ||||| || | |||||||| || || || ||||||||| Sbjct 9074575 TCAATAGTGTCTGAGCTC---TCTACCTCCAAAGTGATCGTTTTACCTGTGAGAGTCTTG 9074519 Query 288460 ACGAATATCTGCAT 288473 || || || ||||| Sbjct 9074518 ACAAAGATTTGCAT 9074505 Score = 93.3 bits (102), Expect = 1e-13 Identities = 138/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||||||||||||||| ||||| || | || ||||| | || || || || || Sbjct 9074924 TTCCTTTTGGATATTATAGTCAGCGAGAGTTCTCCCATCTTCAAGCTGCTTGCCAGCAAA 9074865 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| || | || || |||||| || || ||||| ||||| || || ||||| || Sbjct 9074864 GATAAGCCTTTGCTGGTCTGGTGGGATACCCTCCTTATCTTGGATCTTTGCCTTCACATT 9074805 Query 288402 TTCTATAGAATCGCTCGATTCT--ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || || | ||| || || | ||||| ||||| || || |||||||| Sbjct 9074804 ATCAATGGTAT--CTGAACTCTCAACCTCCAATGTGATAGTCTTTCCCGTAAGAGTCTTC 9074747 Query 288460 ACGAATATCTGCAT 288473 || || || ||||| Sbjct 9074746 ACAAAAATTTGCAT 9074733 Score = 84.2 bits (92), Expect = 5e-11 Identities = 160/233 (69%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || | || | ||| || || ||||| |||||||| || Sbjct 9074047 CCACCACGGAGCCGAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGCT 9073988 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC---GCTGTTGAGAATCT 288363 || || || || ||||| | ||||| || || || || || | |||| | | | Sbjct 9073987 AGGGTTCGGCCATCTTCAAGCTGTTTGCCAGCAAAAATAAGCCTTTGCTGGTCGGGA--- 9073931 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 ||||||||||| || || ||||| || || || || || || |||| || |||| Sbjct 9073930 GGGATTCCTTCCTTGTCTTGGATCTTAGCCTTGACATTGTCAATAGTGTCAGAGCTC--- 9073874 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| ||||| || || || || || || || || ||||| Sbjct 9073873 TCAACCTCAAGGGTGATGGTCTTGCCTGTAAGGGTTTTCACAAAGATTTGCAT 9073821 >seq9 Length=8984705 Score = 104 bits (114), Expect = 6e-17 Identities = 167/233 (72%), Gaps = 14/233 (6%) Strand=Plus/Minus Query 288247 CCACCG-CGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| | ||| || ||||| | ||| || || |||||||| ||||| || Sbjct 7053530 CCACCGACGGAG-CGAAGGACAAGATGCAGGGTGGACTCCTTCTGGATATTGTAGTCAGC 7053472 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || ||||| || || || || || || || || ||||||| | ||| || ||||| Sbjct 7053471 CAGAGTGCGACCATCCTCCAACTGCTTGCCAGCAAAGATCAACCTCTGCTGG---TCTGG 7053415 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || ||| || || ||||| || || |||||||| || || || | || |||| Sbjct 7053414 AGGAATCCCTCCTTGTCCTGAATCTTTGCTTTCACATTGTCAATCGTGTCTGAGCTC--- 7053358 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| || ||||| ||| |||||||| ||||||||||| Sbjct 7053357 TCAACCTCCAGGGTGATGGTTTTCCCA-TCAAGGTCTTGACAAATATCTGCAT 7053306 Score = 102 bits (112), Expect = 2e-16 Identities = 163/230 (71%), Gaps = 8/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || ||||| | ||| || || |||||||| ||||| || Sbjct 7046639 CCACCACGGAGGCGAAGGACCAGATGCAGGGTGGACTCCTTCTGGATATTGTAGTCAGCC 7046580 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || ||| | || || || ||||||| | ||| || ||||| Sbjct 7046579 AGAGTGCGACCATCCTCCAAT-GCTTGCCAGCAAAGATCAACCTCTGCTGG---TCTGGA 7046524 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || ||||| || || |||||||| || || || | || | ||| Sbjct 7046523 GGAATCCCCTCCTTGTCCTGAATCTTTGCTTTCACATTGTCAATCGTGTCTGA-GCTTCA 7046465 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| || ||||| |||| ||||||| ||||||||||| Sbjct 7046464 ACCTCCAGGGTGATGGTTTTCCCAGTCAAGGTCTTGAAAAATATCTGCAT 7046415 Score = 100 bits (110), Expect = 7e-16 Identities = 142/197 (72%), Gaps = 12/197 (6%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 |||||||||||||| || || || || || | || || || || ||||| || || || Sbjct 7053042 TCTTTTTGGATATTGTAATCTGCAAGTGTCCTCCCATCCTCCAACTGTTTGCCAGCAAAT 7052983 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||| | |||||| |||| ||||| ||||| || |||||||| || ||||| || Sbjct 7052982 ATCAGCCTCTGTTG---ATCTGGAGGGATACCTTCCTTGTCCTGGATCTTAGCTTTTACA 7052926 Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 || || || | ||| ||| || ||||| | || || ||||| || || || ||| Sbjct 7052925 TTGTCAATGGTATCAGAACTC---TCAACTTCCAAGGTAATAGTCTTTCCAGTGAGGGTC 7052869 Query 288457 TTGACGAATATCTGCAT 288473 ||||| || || ||||| Sbjct 7052868 TTGACAAAAATTTGCAT 7052852 Score = 95.1 bits (104), Expect = 3e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || || || ||| || || || || ||||| || Sbjct 7042693 CCACCACGGAGGCGAAGGACAAGGTGCCAAGTTGATTCCTTCTGAATGTTGTAGTCTGCC 7042634 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | || ||||| | ||| || ||||| |||||||| | ||| || | ||| Sbjct 7042633 AGGGTCCTCCCATCTTCAAGTTGCTTCCCTGCAAAGATCAGCCTCTGCTGGTCTTGGGGG 7042574 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| ||||||||||| || || || || || || || | || ||| ||| Sbjct 7042573 ATCCCTTCCTTATCCTGGATCTTGGCCTTAACATTATCAATGGTGTCTGAACTTTCAACT 7042514 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || |||| ||||| | || || ||||| Sbjct 7042513 TCCAGGGTGATGGTCTTTCCTGTCAAGGTCTTCATAAAAATTTGCAT 7042467 >seq14 Length=6982396 Score = 93.3 bits (102), Expect = 1e-13 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || || || || | || | ||||| || | || || || || ||| Sbjct 1120510 TCCTTTTGGATGTTGTAATCCGCTAAGGTTCTGCCGTCCTCGAGCTGCTTCCCAGCAAAG 1120569 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | || || |||||||||||| || |||||||| || || |||||||| Sbjct 1120570 ATAAGCCTTTGCTGGTCCGGTGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTG 1120629 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| ||| ||||| || || || || || || ||||| ||||||||| Sbjct 1120630 TCAATGGTGTCGGAGCTTTCGACTTCCAGGGTTATGGTTTTACCCGTCAGGGTCTTGACG 1120689 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 1120690 AAGATTTGCAT 1120700 Score = 91.5 bits (100), Expect = 3e-13 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTC-TAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||||| ||||| | |||| || || || | || || |||||||| || || || || Sbjct 1120246 CCACCACGGAGACGTAAG-ACCAGGTGGAGGGTTGACTCCTTTTGGATGTTGTAATCCGC 1120304 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | || || ||||| || | ||| || || || ||||| || | || || || || Sbjct 1120305 CAAAGTTCGGCCGTCCTCGAGTTGCTTCCCAGCAAAGATAAGCCTTTGCTGG---TCCGG 1120361 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 | ||||||||||| |||||||| || || |||||||| || || | ||| ||| Sbjct 1120362 GGGAATTCCTTCTTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTC 1120421 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | || || || || || ||||| |||||||| || || ||||| Sbjct 1120422 AACTTCCAAGGTTATGGTTTTGCCCGTCAGGGTCTTGACAAAGATTTGCAT 1120472 Score = 87.8 bits (96), Expect = 4e-12 Identities = 158/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | | || || |||| ||| || || || ||||| || || || Sbjct 1119790 CCACCACGAAGGCGCAAGACCAGGTGAAGGGTGGACTCCTTCTGAATATTGTAATCAGCC 1119849 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | ||| ||||| ||||| || || || || |||| | || ||| ||| Sbjct 1119850 AAAGTCCTTCCATCTTCCAATTGCTTCCCAGCAAAAATCAACCTTTGCTGATCTGGTGGA 1119909 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| || ||||| || || || || || || || || | ||| |||| || Sbjct 1119910 ATCCCTTCCTTGTCCTGAATCTTTGCCTTAACATTATCAATCGTATCCGAGCTC---TCC 1119966 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | || || || ||||| ||||||||||||||||| |||||||| Sbjct 1119967 ACCTCCAAAGTAATGGTTTTCCCTGTCAGAGTCTTGACGAAAATCTGCAT 1120016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179562595608172