Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05]
6,074 sequences; 234,039,246 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq5 134 3e-26
seq13 122 2e-22
seq10 122 2e-22
seq4 120 7e-22
seq1649 111 4e-19
seq2 111 4e-19
seq9 104 6e-17
seq14 93.3 1e-13
>seq5
Length=11097736
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | ||| | || ||||| |||| ||| ||| || ||||| || ||||||||
Sbjct 4357032 CCACCCCTGAGACGGAGAACGAGGTGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGCT 4356973
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| ||||| |||||||| | || || || |||||||| ||||| || || |||
Sbjct 4356972 AAGGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCCGGCGGG 4356913
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||| || || ||||| || ||||| || || || || | || ||||| ||
Sbjct 4356912 ATTCCTTCCTTGTCTTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAGGATTCGACC 4356853
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| || || |||||||| || || || |||||||| ||||||||
Sbjct 4356852 TCGAGGGTTATGGTCTTCCCCGTTAGGGTTTTGACGAAGATCTGCAT 4356806
>seq13
Length=7441454
Score = 122 bits (134), Expect = 2e-22
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||||||||| | || || || || | ||| || || ||||| |||||||||||
Sbjct 4972704 CCACCGCGGAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCGGCT 4972645
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || |||||||| | || || || ||||| || ||||| ||||| ||||
Sbjct 4972644 AGGGTCCGGCCGTCTTCAAGCTGCTTGCCGGCGAATATGAGACGTTGTTGGTCCGGTGGG 4972585
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| || || ||||| || || || ||||| || || | ||| ||||| ||
Sbjct 4972584 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCGACC 4972525
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| | || || ||||| || || || || || ||||| ||||||||
Sbjct 4972524 TCCAAGGTTATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 4972478
>seq10
Length=8461613
Score = 122 bits (134), Expect = 2e-22
Identities = 144/194 (74%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| |||||||| ||||| || || | || || ||||| || | ||||| || ||||||
Sbjct 2239059 TCCTTTTGGATGTTATAATCAGCCAAAGTACGGCCGTCCTCCAGCTGTTTCCCGGCGAAG 2239118
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || |||||||| ||||| ||||| || ||||||||||| || || |||||
Sbjct 2239119 ATGAGCCGCTGTTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATTTTGGCCTTGACGTTG 2239178
Query 288403 TCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || | ||| ||| || |||||||| ||||| || || ||||||| ||| |||
Sbjct 2239179 TCAATCGTGTCGGAACTC---TCGACTTCGAGGGTGATGGTTTTGCCGGTCAAAGTTTTG 2239235
Query 288460 ACGAATATCTGCAT 288473
||||| || |||||
Sbjct 2239236 ACGAAGATTTGCAT 2239249
Score = 105 bits (116), Expect = 2e-17
Identities = 167/237 (70%), Gaps = 12/237 (5%)
Strand=Plus/Plus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
|| ||||| ||||| | ||| || || |||| || ||||| || || ||||| ||
Sbjct 2238564 TGCCCACCACGGAGACGAAGAACAAGGTGAAGGGTAGACTCTTTCTGAATGTTATAATCA 2238623
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
|| | || | || || || |||||||| || || ||||| || | || ||| |||
Sbjct 2238624 GCTAAAGTCCTCCCATCCTCCAATTGTTTCCCGGCAAAGATAAGCCTTTGCTGA---TCT 2238680
Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA- 288419
||| |||||||| |||||||| || || || || ||||| || || | ||| |||
Sbjct 2238681 GGGGGGATTCCTTCCTTATCCTGAATCTTTGCCTTGACGTTATCGATTGTATC---CGAA 2238737
Query 288420 --TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
||| || || | ||||| || || || |||| |||||||| || |||||||||
Sbjct 2238738 CTTTCCACCTCCAAGGTGATTGTTTTTCCAGTCAAGGTCTTGACAAAAATCTGCATT 2238794
>seq4
Length=12062019
Score = 120 bits (132), Expect = 7e-22
Identities = 169/236 (72%), Gaps = 6/236 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| || ||||| | ||||| || || | || ||| ||||||||||| || || ||
Sbjct 4154447 CCGCCACGGAGACGGAGTACCAGGTGGAGAGTCGATTCCTTTTGGATATTGTAATCCGCA 4154388
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || |||||||| | ||| || || |||||||||| ||||||||| | ||
Sbjct 4154387 AGGGTTCGGCCGTCTTCAAGTTGCTTGCCGGCGAAGATCAAGCGCTGTTGATCAGGAGGA 4154328
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
|| ||||| || || ||||| || || || ||||| || || | || |||| ||
Sbjct 4154327 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTC---TCC 4154271
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTT 288479
|| ||||| ||||| || || ||||| | || || ||||| |||||||| ||||
Sbjct 4154270 ACCTCGAGGGTGATGGTTTTGCCGGTTAAGGTTTTCACGAAGATCTGCATCTTGTT 4154215
Score = 118 bits (130), Expect = 3e-21
Identities = 165/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|| || ||||| || || || || |||| ||| || || |||||||| || || ||
Sbjct 4154903 CCTCCACGGAGCCTCAGCACAAGGTGAAGAGTGGACTCCTTCTGGATATTGTAATCCGCA 4154844
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || | ||||| || || || || || ||||| |||| | ||| ||| |||
Sbjct 4154843 AGGGTCCTGCCGTCCTCCAACTGCTTCCCGGCGAATATCAACCTCTGCTGATCCGGAGGG 4154784
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA---TTCT 288423
|| ||||| |||||||||||||| || || ||||| || || | ||| ||| |||
Sbjct 4154783 ATCCCTTCCTTATCCTGGATTTTTGCCTTGACGTTATCAATTGTATC---CGAACTCTCT 4154727
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || || || |||||||||| || |||||||| ||||||||
Sbjct 4154726 ACCTCCAGAGTAATAGTTTTCCCGGTCAAGGTTTTGACGAAAATCTGCAT 4154677
>seq1649
Length=3542
Score = 111 bits (122), Expect = 4e-19
Identities = 166/233 (71%), Gaps = 12/233 (5%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| || ||||| | ||| || || |||||||| ||||| ||
Sbjct 1038 CCACCACGGAGGCGAAGGACAAGATGCAGGGTGGACTCCTTCTGGATATTGTAGTCAGCC 979
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || || || || || || || ||||||| | ||| || |||||
Sbjct 978 AGAGTGCGACCATCCTCCAACTGCTTGCCAGCAAAGATCAACCTCTGCTGG---TCTGGA 922
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420
|| || || || ||||| || || |||||||| || || || | || ||||
Sbjct 921 GGAATCCCCTCCTTGTCCTGAATCTTTGCTTTCACATTGTCAATCGTGTCTGAGCTC--- 865
Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || ||||| || ||||| |||| |||||||| |||||||||||
Sbjct 864 TCAACCTCCAGGGTGATGGTTTTCCCAGTCAAGGTCTTGACAAATATCTGCAT 812
>seq2
Length=14367614
Score = 111 bits (122), Expect = 4e-19
Identities = 138/188 (73%), Gaps = 6/188 (3%)
Strand=Plus/Minus
Query 288289 TGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGA 288348
||||| |||||||| || || ||||| |||||||| | ||||| || || ||||| ||
Sbjct 9074461 TGGATGTTATAGTCAGCTAGGGTGCGACCGTCTTCAAGCTGTTTGCCAGCAAAGATAAGC 9074402
Query 288349 CGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATA 288408
| |||||| | ||||||||||| || || ||||| || ||||| || || || ||
Sbjct 9074401 CTTTGTTGATCAGGAGGGATTCCTTCCTTGTCTTGGATCTTAGCTTTGACATTATCAATT 9074342
Query 288409 GAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAAT 288465
| ||| |||| || || || | ||||| ||||| || || || |||||||| ||
Sbjct 9074341 GTATCAGAGCTC---TCAACCTCCAAGGTGATAGTCTTTCCTGTGAGTGTCTTGACAAAG 9074285
Query 288466 ATCTGCAT 288473
|| |||||
Sbjct 9074284 ATTTGCAT 9074277
Score = 105 bits (116), Expect = 2e-17
Identities = 162/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| || | ||| | ||| || || ||||| |||||||| ||
Sbjct 9074275 CCACCACGGAGACGAAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGCT 9074216
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || ||||| | ||||| || || || || || | ||||| | |||
Sbjct 9074215 AGGGTTCGGCCATCTTCAAGCTGTTTGCCAGCAAAAATAAGCCTTTGTTGGTCAGGAGGG 9074156
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
|||||||| || || ||||| || || || || || || |||| || |||| ||
Sbjct 9074155 ATTCCTTCCTTGTCTTGGATCTTAGCCTTGACATTATCAATAGTGTCAGAGCTC---TCA 9074099
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || | ||||| ||||| || || ||||||||||| || || |||||
Sbjct 9074098 ACCTCCAAGGTGATAGTCTTTCCTGTGAGAGTCTTGACAAAGATTTGCAT 9074049
Score = 104 bits (114), Expect = 6e-17
Identities = 140/194 (72%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| ||||| || ||||| || || || || | ||| ||||| | ||||||||| || ||
Sbjct 9074695 TCCTTTTGAATGTTATAATCAGCAAGTGTCCTTCCATCTTCAAGTTGTTTTCCAGCAAAA 9074636
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|||| | ||| || |||||| || ||||||||||| || || || || || ||
Sbjct 9074635 ATCAACCTCTGCTGGTCTGGTGGGATACCCTCTTTATCCTGAATCTTGGCCTTGACATTG 9074576
Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| |||| || |||| ||||| || | |||||||| || || || |||||||||
Sbjct 9074575 TCAATAGTGTCTGAGCTC---TCTACCTCCAAAGTGATCGTTTTACCTGTGAGAGTCTTG 9074519
Query 288460 ACGAATATCTGCAT 288473
|| || || |||||
Sbjct 9074518 ACAAAGATTTGCAT 9074505
Score = 93.3 bits (102), Expect = 1e-13
Identities = 138/194 (71%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| ||||||||||||||||| ||||| || | || ||||| | || || || || ||
Sbjct 9074924 TTCCTTTTGGATATTATAGTCAGCGAGAGTTCTCCCATCTTCAAGCTGCTTGCCAGCAAA 9074865
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||| || | || || |||||| || || ||||| ||||| || || ||||| ||
Sbjct 9074864 GATAAGCCTTTGCTGGTCTGGTGGGATACCCTCCTTATCTTGGATCTTTGCCTTCACATT 9074805
Query 288402 TTCTATAGAATCGCTCGATTCT--ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || | || || | ||| || || | ||||| ||||| || || ||||||||
Sbjct 9074804 ATCAATGGTAT--CTGAACTCTCAACCTCCAATGTGATAGTCTTTCCCGTAAGAGTCTTC 9074747
Query 288460 ACGAATATCTGCAT 288473
|| || || |||||
Sbjct 9074746 ACAAAAATTTGCAT 9074733
Score = 84.2 bits (92), Expect = 5e-11
Identities = 160/233 (69%), Gaps = 12/233 (5%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| || | || | ||| || || ||||| |||||||| ||
Sbjct 9074047 CCACCACGGAGCCGAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGCT 9073988
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC---GCTGTTGAGAATCT 288363
|| || || || ||||| | ||||| || || || || || | |||| | | |
Sbjct 9073987 AGGGTTCGGCCATCTTCAAGCTGTTTGCCAGCAAAAATAAGCCTTTGCTGGTCGGGA--- 9073931
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420
||||||||||| || || ||||| || || || || || || |||| || ||||
Sbjct 9073930 GGGATTCCTTCCTTGTCTTGGATCTTAGCCTTGACATTGTCAATAGTGTCAGAGCTC--- 9073874
Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || ||||| ||||| || || || || || || || || |||||
Sbjct 9073873 TCAACCTCAAGGGTGATGGTCTTGCCTGTAAGGGTTTTCACAAAGATTTGCAT 9073821
>seq9
Length=8984705
Score = 104 bits (114), Expect = 6e-17
Identities = 167/233 (72%), Gaps = 14/233 (6%)
Strand=Plus/Minus
Query 288247 CCACCG-CGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| ||||| | ||| || ||||| | ||| || || |||||||| ||||| ||
Sbjct 7053530 CCACCGACGGAG-CGAAGGACAAGATGCAGGGTGGACTCCTTCTGGATATTGTAGTCAGC 7053472
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
|| ||||| || || || || || || || || ||||||| | ||| || |||||
Sbjct 7053471 CAGAGTGCGACCATCCTCCAACTGCTTGCCAGCAAAGATCAACCTCTGCTGG---TCTGG 7053415
Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420
|| ||| || || ||||| || || |||||||| || || || | || ||||
Sbjct 7053414 AGGAATCCCTCCTTGTCCTGAATCTTTGCTTTCACATTGTCAATCGTGTCTGAGCTC--- 7053358
Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || ||||| || ||||| ||| |||||||| |||||||||||
Sbjct 7053357 TCAACCTCCAGGGTGATGGTTTTCCCA-TCAAGGTCTTGACAAATATCTGCAT 7053306
Score = 102 bits (112), Expect = 2e-16
Identities = 163/230 (71%), Gaps = 8/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| || ||||| | ||| || || |||||||| ||||| ||
Sbjct 7046639 CCACCACGGAGGCGAAGGACCAGATGCAGGGTGGACTCCTTCTGGATATTGTAGTCAGCC 7046580
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || || ||| | || || || ||||||| | ||| || |||||
Sbjct 7046579 AGAGTGCGACCATCCTCCAAT-GCTTGCCAGCAAAGATCAACCTCTGCTGG---TCTGGA 7046524
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || ||||| || || |||||||| || || || | || | |||
Sbjct 7046523 GGAATCCCCTCCTTGTCCTGAATCTTTGCTTTCACATTGTCAATCGTGTCTGA-GCTTCA 7046465
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||| || ||||| |||| ||||||| |||||||||||
Sbjct 7046464 ACCTCCAGGGTGATGGTTTTCCCAGTCAAGGTCTTGAAAAATATCTGCAT 7046415
Score = 100 bits (110), Expect = 7e-16
Identities = 142/197 (72%), Gaps = 12/197 (6%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|||||||||||||| || || || || || | || || || || ||||| || || ||
Sbjct 7053042 TCTTTTTGGATATTGTAATCTGCAAGTGTCCTCCCATCCTCCAACTGTTTGCCAGCAAAT 7052983
Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||| | |||||| |||| ||||| ||||| || |||||||| || ||||| ||
Sbjct 7052982 ATCAGCCTCTGTTG---ATCTGGAGGGATACCTTCCTTGTCCTGGATCTTAGCTTTTACA 7052926
Query 288400 TTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456
|| || || | ||| ||| || ||||| | || || ||||| || || || |||
Sbjct 7052925 TTGTCAATGGTATCAGAACTC---TCAACTTCCAAGGTAATAGTCTTTCCAGTGAGGGTC 7052869
Query 288457 TTGACGAATATCTGCAT 288473
||||| || || |||||
Sbjct 7052868 TTGACAAAAATTTGCAT 7052852
Score = 95.1 bits (104), Expect = 3e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | ||| || || || || ||| || || || || ||||| ||
Sbjct 7042693 CCACCACGGAGGCGAAGGACAAGGTGCCAAGTTGATTCCTTCTGAATGTTGTAGTCTGCC 7042634
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || | || ||||| | ||| || ||||| |||||||| | ||| || | |||
Sbjct 7042633 AGGGTCCTCCCATCTTCAAGTTGCTTCCCTGCAAAGATCAGCCTCTGCTGGTCTTGGGGG 7042574
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| ||||||||||| || || || || || || || | || ||| |||
Sbjct 7042573 ATCCCTTCCTTATCCTGGATCTTGGCCTTAACATTATCAATGGTGTCTGAACTTTCAACT 7042514
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| ||||| || |||| ||||| | || || |||||
Sbjct 7042513 TCCAGGGTGATGGTCTTTCCTGTCAAGGTCTTCATAAAAATTTGCAT 7042467
>seq14
Length=6982396
Score = 93.3 bits (102), Expect = 1e-13
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| |||||||| || || || || | || | ||||| || | || || || || |||
Sbjct 1120510 TCCTTTTGGATGTTGTAATCCGCTAAGGTTCTGCCGTCCTCGAGCTGCTTCCCAGCAAAG 1120569
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | || || |||||||||||| || |||||||| || || ||||||||
Sbjct 1120570 ATAAGCCTTTGCTGGTCCGGTGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTG 1120629
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | ||| ||| ||||| || || || || || || ||||| |||||||||
Sbjct 1120630 TCAATGGTGTCGGAGCTTTCGACTTCCAGGGTTATGGTTTTACCCGTCAGGGTCTTGACG 1120689
Query 288463 AATATCTGCAT 288473
|| || |||||
Sbjct 1120690 AAGATTTGCAT 1120700
Score = 91.5 bits (100), Expect = 3e-13
Identities = 161/231 (70%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTC-TAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
||||| ||||| | |||| || || || | || || |||||||| || || || ||
Sbjct 1120246 CCACCACGGAGACGTAAG-ACCAGGTGGAGGGTTGACTCCTTTTGGATGTTGTAATCCGC 1120304
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
| || || ||||| || | ||| || || || ||||| || | || || || ||
Sbjct 1120305 CAAAGTTCGGCCGTCCTCGAGTTGCTTCCCAGCAAAGATAAGCCTTTGCTGG---TCCGG 1120361
Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422
| ||||||||||| |||||||| || || |||||||| || || | ||| |||
Sbjct 1120362 GGGAATTCCTTCTTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCGGAGCTTTC 1120421
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| | || || || || || ||||| |||||||| || || |||||
Sbjct 1120422 AACTTCCAAGGTTATGGTTTTGCCCGTCAGGGTCTTGACAAAGATTTGCAT 1120472
Score = 87.8 bits (96), Expect = 4e-12
Identities = 158/230 (69%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | | || || |||| ||| || || || ||||| || || ||
Sbjct 1119790 CCACCACGAAGGCGCAAGACCAGGTGAAGGGTGGACTCCTTCTGAATATTGTAATCAGCC 1119849
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || | ||| ||||| ||||| || || || || |||| | || ||| |||
Sbjct 1119850 AAAGTCCTTCCATCTTCCAATTGCTTCCCAGCAAAAATCAACCTTTGCTGATCTGGTGGA 1119909
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423
|| ||||| || ||||| || || || || || || || || | ||| |||| ||
Sbjct 1119910 ATCCCTTCCTTGTCCTGAATCTTTGCCTTAACATTATCAATCGTATCCGAGCTC---TCC 1119966
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
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Sbjct 1119967 ACCTCCAAAGTAATGGTTTTCCCTGTCAGAGTCTTGACGAAAATCTGCAT 1120016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179562595608172
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |