Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05] 6,074 sequences; 234,039,246 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 1e-14 >seq1 Length=15579451 Score = 95.1 bits (104), Expect = 1e-14 Identities = 248/369 (67%), Gaps = 12/369 (3%) Strand=Plus/Minus Query 10789 ATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGC 10848 |||||| || ||||| | | | ||| ||||| ||||| ||||| || || || Sbjct 14793614 ATCAAACCGTCCTGGCCTCAACAAGGCAGAATCAAGAATATCTGCCCGGTTAGTTGCTGC 14793555 Query 10849 GATGACAACGATGCCCGTCTCGTTA---TCAAAGCCATCCATCTCAGTCAAGAGTTGATT 10905 || |||| ||| || || |||| ||||| |||||||| |||||||| || || || Sbjct 14793554 TATTACAATGATACCTGT---GTTACCCTCAAAACCATCCATTTCAGTCAAAAGCTGGTT 14793498 Query 10906 GATGGTTTGTTCGCGTTCATCATTCGCGGG-CATACCACCCGCACTGCGTTGCTTACCGA 10964 | ||||| || | |||||| ||| | | || ||| | | | |||| || | Sbjct 14793497 AAGAGTTTGCTCCCTTTCATCGTTCCCACCACCTAT-ACCAGTTCCTCTTTGCCGTCCAA 14793439 Query 10965 CGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGGCAA-CTTCAAAG 11023 | || ||||||||||| | || || ||||| || ||| || ||| ||| ||| Sbjct 14793438 CAGCATCAATTTCATCCACAAAGACAATACAGGGGGCATTCTCCTTGGCCTTCTTGAAA- 14793380 Query 11024 ATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGCGGCGGAA 11083 | ||| || |||| |||||| ||||| ||||||||||| ||||| | | | ||| Sbjct 14793379 AGATCACGAACTCGAGAGGCACCAACACCAACAAACATTTCAACAAACTCAGAACCAGAA 14793320 Query 11084 CATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCC 11142 || | || ||| || || | |||||| || || || ||| || || ||||| || Sbjct 14793319 -ATGGAGAAGAATGGCACACCAGCTTCACCAGCAATTGCCTTGGCCAGAAGAGTCTTTCC 14793261 Query 11143 CGTCCCAGG 11151 || ||||| Sbjct 14793260 AGTTCCAGG 14793252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597308245927920