Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05] 6,074 sequences; 234,039,246 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq5 125 7e-24 seq4 122 9e-23 seq10 113 5e-20 seq9 113 5e-20 seq2 109 5e-19 seq14 95.1 1e-14 seq13 95.1 1e-14 seq1649 91.5 1e-13 >seq5 Length=11097736 Score = 125 bits (138), Expect = 7e-24 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| || ||||| || || |||||||| || || | |||||| ||||| Sbjct 4357017 AGAACGAGGTGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGCTAAGGTGCGGCCGTCT 4356958 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||||||||| | ||||| || |||||||| || || |||||||| || ||| Sbjct 4356957 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCCGGCGGGATTCCTTCCTTGTCT 4356898 Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || | | || ||||| ||| || | || ||| || || || || | |||| ||| Sbjct 4356897 TGGA-TCTTGGCTTTGACATTGTCGATGGTGTCAGAGGATTCGACCTCGAGGGTTATGGT 4356839 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 ||| || || | ||||| ||||| || ||||| || Sbjct 4356838 CTTCCCCGTTAGGGTTTTGACGAAGATCTGCATCTT 4356803 >seq4 Length=12062019 Score = 122 bits (134), Expect = 9e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | ||| || || |||| || || || || || |||||||||||||| Sbjct 4155132 ACCACCGCGAAGGCGAAGGACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAATCTGC 4155073 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| |||| || | |||||| || || | ||||||| |||||| || || || Sbjct 4155072 AAGAGTGCGCCCGTCCTCCAACTGCTTCCCAGCGAAGATGAGCCTCTGCTGATCAGGTGG 4155013 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 ||| || || || ||||| | |||||||||| ||| || | ||||||| |||| Sbjct 4155012 AATCCCCTCCTTATCTTG-AATTTTTGCTTTCACATTATCGATTGTATCAGAACTCTCCA 4154954 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || | || | ||||| ||||||| || || ||||| || ||||| Sbjct 4154953 CCTCAAGCGTAATCGTCTTTCCGGTCAGCGTCTTCACGAAGATCTGCAT 4154905 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || ||||||| || ||||| || |||| || ||||| || || || ||||| || || Sbjct 4154675 CCTCCGCGCAGCCTGAGCACAAGGTGAAGGGTTGATTCCTTCTGGATATTGTAGTCGGCC 4154616 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | |||||| |||| || ||||||||||| || | || | ||||| ||||| ||||| Sbjct 4154615 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGTTGGTCCGGAGGG 4154556 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || ||||| || || ||| || || | || ||| | || ||| Sbjct 4154555 ATGCCCTCCTTGTCTTGGATCTTGGCCTTAACGTTGTCGATCGTGTCAGAGCTTTCGACT 4154496 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||| | |||||||||||| | ||||| ||||| || ||||| Sbjct 4154495 TCAAGAGTGATGGTCTTGCCGGTTAGGGTTTTGACGAAGATCTGCAT 4154449 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | || || || || | |||||||| ||||| || |||||||| || Sbjct 4154448 ACCGCCACGGAGACGGAGTACCAGGTGGAGAGTCGATTCCTTTTGGATATTGTAATCCGC 4154389 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || |||||||||| ||||||||||| | || | ||||| || || ||||| Sbjct 4154388 AAGGGTTCGGCCGTCTTCAAGTTGCTTGCCGGCGAAGATCAAGCGCTGTTGATCAGGAGG 4154329 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| || || ||| || || | || || | ||||| Sbjct 4154328 AATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCTGAGCTCTCCAC 4154269 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | || | ||| |||||||| || ||||| ||||| || ||||| || Sbjct 4154268 CTCGAGGGTGATGGTTTTGCCGGTTAAGGTTTTCACGAAGATCTGCATCTT 4154218 >seq10 Length=8461613 Score = 113 bits (124), Expect = 5e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288 || || || || || | || || || ||||| ||||| ||||| || | || || || Sbjct 2239035 CTGAGGACAAGGTGGAGAGTTGACTCCTTTTGGATGTTATAATCAGCCAAAGTACGGCCG 2239094 Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 || || ||||| || ||||| | ||||||||||| ||||||||||| || ||||| || Sbjct 2239095 TCCTCCAGCTGTTTCCCGGCGAAGATGAGCCGCTGTTGGTCGGGAGGGATGCCTTCCTTG 2239154 Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408 || || ||||| ||| || || | || || || ||||| | || | | Sbjct 2239155 TCCTGGATTTTGGCCTTGACGTTGTCAATCGTGTCGGAACTCTCGACTTCGAGGGTGATG 2239214 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || ||||||||||||||||| ||||| |||||||| Sbjct 2239215 GTTTTGCCGGTCAAAGTTTTGACGAAGATTTGCAT 2239249 Score = 105 bits (116), Expect = 7e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | || || || || | || || || || || ||||| ||||| || Sbjct 2239250 ACCGCCACGAAGACGGAGGACCAGGTGGAGAGTTGACTCCTTCTGGATGTTATAATCCGC 2239309 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || ||||||| ||||| || ||||| | ||||||| ||||||||||| || Sbjct 2239310 CAAGGTACGACCGTCTTCGAGCTGTTTCCCGGCGAAGATGAGCCTTTGCTGGTCGGGTGG 2239369 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || ||||| || || ||| || || | || || || || Sbjct 2239370 GATCCCTTCCTTGTCTTGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAACTCTCGAC 2239429 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | ||||| |||||||||||||| ||||| ||||| || ||||| || Sbjct 2239430 CTCGAGAGTTATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCATCTT 2239480 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||||| || ||||| ||||| ||||||||||| || | ||| | | |||| ||| Sbjct 2238813 ACAAGATGAAGGGTTGATTCCTTTTGTATGTTGTAATCAGCCAAGGTCCTCCCGTCCTCA 2238872 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 |||||||| ||||| | || | || || ||||| || || || ||||| || ||||| Sbjct 2238873 AGCTGCTTCCCGGCGAAGATCAAACGTTGTTGGTCTGGTGGGATCCCTTCCTTATCTTGG 2238932 Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414 || || ||| || || | || || | || || || | |||| ||||| Sbjct 2238933 ATCTTGGCCTTAACGTTATCAATCGTGTCCGAGCTCTCGACCTCCAAGGTTATTGTCTTT 2238992 Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || ||||| ||||| || || |||||||| Sbjct 2238993 CCTGTCAAGGTTTTGACAAAGATTTGCAT 2239021 >seq9 Length=8984705 Score = 113 bits (124), Expect = 5e-20 Identities = 144/197 (73%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || |||||||||||||||||||| | ||| | | || | ||||||||| || Sbjct 7042435 GTTGACTCCTTTTGAATGTTGTAATCTGCAAGGGTCTTCCCATCCTTAAGCTGCTTACCA 7042376 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| |||| ||||||||| ||||| || ||||| || ||||| ||||| ||| Sbjct 7042375 GCAAAAATAAGCCTCTGCTGGTCTGGAGG-ATACCTTCATTGTCTTGAATTTTGGCCTTG 7042317 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || ||||| | | || |||| | ||| | |||||| || |||| || Sbjct 7042316 ACATTGTCAACTGTGTTGGAGCTTTCAACTTGCAAAGTAATGGTCTTACCAGTCAGCGTC 7042257 Query 64427 TTTACGAAAATTTGCAT 64443 || || ||||| ||||| Sbjct 7042256 TTCACAAAAATCTGCAT 7042240 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| || ||||||||||| ||||| | ||| | | | |||||||| ||||| || Sbjct 7042663 GTTGATTCCTTCTGAATGTTGTAGTCTGCCAGGGTCCTCCCATCTTCAAGTTGCTTCCCT 7042604 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| ||||||||| | || || ||||| || || || || || ||| Sbjct 7042603 GCAAAGATCAGCCTCTGCTGGTCTTGGGGGATCCCTTCCTTATCCTGGATCTTGGCCTTA 7042544 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || || || ||||| | || | |||||| || ||||| || Sbjct 7042543 ACATTATCAATGGTGTCTGAACTTTCAACTTCCAGGGTGATGGTCTTTCCTGTCAAGGTC 7042484 Query 64427 TTTACGAAAATTTGCAT 64443 || | ||||||||||| Sbjct 7042483 TTCATAAAAATTTGCAT 7042467 Score = 91.5 bits (100), Expect = 1e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| ||||| || ||||||||||| |||||||| | || || | ||||||||||| Sbjct 1646406 TGAAGAGTCGACTCCTTTTGAATGTTATAATCTGCAAGAGTTCGACCTTCTTCAAGCTGT 1646465 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||||| ||| |||| | | |||||| || ||||| |||||||| || || Sbjct 1646466 TTGCCCGCAAAAATCAATCTCTGCTGATCAGGAGGGATTCCTTCCTTATC 1646515 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || |||||||| || ||||| | ||| | | ||||||||||| || ||| Sbjct 7052820 GTTGACTCCTTCTGAATGTTATAGTCTGCAAGGGTTCTGCCATCTTCAAGCTGTTTTCCG 7052761 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| | || ||||||||| || || || || || || || || || || ||| Sbjct 7052760 GCAAAAATTAACCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTGAATCTTCGCCTTC 7052701 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | ||||| ||||| |||| ||| | ||| || || || | |||| Sbjct 7052700 ACATTATCGATGGTATCTGAACTCTCCACCTCTAAAGTGATGGTTTTCCCAGTGAGAGTT 7052641 Query 64427 TTTACGAAAATTTGCAT 64443 || || || || ||||| Sbjct 7052640 TTCACAAATATCTGCAT 7052624 Score = 82.4 bits (90), Expect = 8e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| ||||| || ||||| ||||| |||||||| | || || | |||||||||||| Sbjct 1708137 TGAAGAGTCGACTCCTTTTGGATGTTATAATCTGCAAGAGTTCGACCATCTTCAAGCTGC 1708196 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || || ||| |||| | | |||||| || |||| |||||||| || || Sbjct 1708197 TTACCAGCAAAAATTAATCTCTGCTGATCAAGAGGGATTCCTTCCTTGTC 1708246 >seq2 Length=14367614 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| | || | || || || || || ||||| || || || | ||| || | || Sbjct 9074033 AAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGCTAGGGTTCGGCCATC 9073974 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||||||||| ||||| ||| |||| |||| |||||||||||||| |||||||| || || Sbjct 9073973 TTCAAGCTGTTTGCCAGCAAAAATAAGCCTTTGCTGGTCGGGAGGGATTCCTTCCTTGTC 9073914 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| || || ||| ||| || | || ||| | || || || | || | ||| Sbjct 9073913 TTGGATCTTAGCCTTGACATTGTCAATAGTGTCAGAGCTCTCAACCTCAAGGGTGATGGT 9073854 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| || | ||||| || || |||||||| Sbjct 9073853 CTTGCCTGTAAGGGTTTTCACAAAGATTTGCAT 9073821 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| | ||| | || || || || || ||||| || || || | ||| || | || Sbjct 9074261 AAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGCTAGGGTTCGGCCATC 9074202 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||||||||| ||||| ||| |||| |||| || ||||| ||||| |||||||| || || Sbjct 9074201 TTCAAGCTGTTTGCCAGCAAAAATAAGCCTTTGTTGGTCAGGAGGGATTCCTTCCTTGTC 9074142 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| || || ||| ||| || | || ||| | || || || | || | || Sbjct 9074141 TTGGATCTTAGCCTTGACATTATCAATAGTGTCAGAGCTCTCAACCTCCAAGGTGATAGT 9074082 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| || || | ||| || || || |||||||| Sbjct 9074081 CTTTCCTGTGAGAGTCTTGACAAAGATTTGCAT 9074049 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || ||||| ||||| || || || || |||| || | | | |||||||||||| Sbjct 9074935 TGAAGGGTAGATTCCTTTTGGATATTATAGTCAGCGAGAGTTCTCCCATCTTCAAGCTGC 9074876 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 ||||| ||| | || |||| |||||||| || || || || || || ||||| || ||| Sbjct 9074875 TTGCCAGCAAAGATAAGCCTTTGCTGGTCTGGTGGGATACCCTCCTTATCTTGGATCTTT 9074816 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||| ||| || | ||||| || || || | || | ||||| || || Sbjct 9074815 GCCTTCACATTATCAATGGTATCTGAACTCTCAACCTCCAATGTGATAGTCTTTCCCGTA 9074756 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 | ||| || || ||||||||||| Sbjct 9074755 AGAGTCTTCACAAAAATTTGCAT 9074733 Score = 89.7 bits (98), Expect = 5e-13 Identities = 133/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 64259 TGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGC 64318 || ||||| || || || | |||||| ||||||||||||| ||||| ||| | || ||| Sbjct 9074461 TGGATGTTATAGTCAGCTAGGGTGCGACCGTCTTCAAGCTGTTTGCCAGCAAAGATAAGC 9074402 Query 64319 CGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCAC 64377 | || || || ||||| |||||||| || ||||| | | || ||||| ||| || | Sbjct 9074401 CTTTGTTGATCAGGAGGGATTCCTTCCTTGTCTTGGA-TCTTAGCTTTGACATTATCAAT 9074343 Query 64378 TGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAAT 64437 ||||||| | || || || | || | ||||| || || | || || || || || Sbjct 9074342 TGTATCAGAGCTCTCAACCTCCAAGGTGATAGTCTTTCCTGTGAGTGTCTTGACAAAGAT 9074283 Query 64438 TTGCAT 64443 |||||| Sbjct 9074282 TTGCAT 9074277 >seq14 Length=6982396 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || ||||| ||||||||||| || | || || |||| || || ||||| || Sbjct 1120276 GTTGACTCCTTTTGGATGTTGTAATCCGCCAAAGTTCGGCCGTCCTCGAGTTGCTTCCCA 1120335 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| |||||||| || |||||||||||||| || || || || ||| Sbjct 1120336 GCAAAGATAAGCCTTTGCTGGTCCGGGGGAATTCCTTCTTTGTCCTGGATCTTGGCCTTC 1120395 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || || | || ||||| | |||| ||| ||||| |||| || Sbjct 1120396 ACGTTGTCGATGGTGTCGGAGCTTTCAACTTCCAAGGTTATGGTTTTGCCCGTCAGGGTC 1120455 Query 64427 TTTACGAAAATTTGCAT 64443 || || || |||||||| Sbjct 1120456 TTGACAAAGATTTGCAT 1120472 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 64240 ATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTG 64299 ||||| ||||| ||||| |||||||| ||||| || | || || |||| || ||||| Sbjct 1120041 ATGAAGGGTCGACTCTTTCTGAATGTTATAATCAGCCAAAGTTCGACCGTCCTCGAGCTG 1120100 Query 64300 CTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359 ||| || ||| | || |||| ||||| || || ||||||||||| || || || || || Sbjct 1120101 CTTCCCTGCAAAGATAAGCCTTTGCTGATCTGGCGGAATTCCTTCCTTGTCCTGGATCTT 1120160 Query 64360 TTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419 ||| || || | || || || ||||| | |||| ||| || || || Sbjct 1120161 GGCCTTCACGTTGTCGATGGTGTCGGAACTTTCAACTTCCAAGGTTATGGTTTTACCCGT 1120220 Query 64420 CAAAGTTTTTACGAAAATTTGCAT 64443 || || || || || |||||||| Sbjct 1120221 CAGGGTCTTGACAAAGATTTGCAT 1120244 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || ||||| ||||||||||| || | ||| | |||| || |||||||| || Sbjct 1120504 GTTGACTCCTTTTGGATGTTGTAATCCGCTAAGGTTCTGCCGTCCTCGAGCTGCTTCCCA 1120563 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || |||| |||||||| || || |||||||| || || || || || ||| Sbjct 1120564 GCAAAGATAAGCCTTTGCTGGTCCGGTGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTC 1120623 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || || | || ||||| | |||| ||| || || |||| || Sbjct 1120624 ACGTTGTCAATGGTGTCGGAGCTTTCGACTTCCAGGGTTATGGTTTTACCCGTCAGGGTC 1120683 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| |||||||| Sbjct 1120684 TTGACGAAGATTTGCAT 1120700 >seq13 Length=7441454 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || ||||| || || || | ||| || |||||||||||||||||||| Sbjct 4972674 GTGGACTCCTTCTGGATGTTATAGTCGGCTAGGGTCCGGCCGTCTTCAAGCTGCTTGCCG 4972615 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| || || ||||| || || || ||||| || ||||| || || ||| Sbjct 4972614 GCGAATATGAGACGTTGTTGGTCCGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTG 4972555 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || || || || || || | |||| |||||| || || | ||| Sbjct 4972554 ACGTTGTCGATGGTGTCGGAGGATTCGACCTCCAAGGTTATGGTCTTACCCGTTAGGGTT 4972495 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 4972494 TTCACGAAGATCTGCAT 4972478 >seq1649 Length=3542 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || ||||| ||||| || ||||| | || | | | |||||||||||||| || Sbjct 780 GTTGACTCCTTTTGGATGTTATAGTCTGCAAGTGTCCTCCCATCTTCAAGCTGCTTCCCA 721 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| | || || ||||| || || || || || || ||||| | | || ||||| Sbjct 720 GCAAAAATCAACCTTTGTTGGTCAGGTGGGATACCCTCCTTATCTTGGA-TCTTGGCTTT 662 Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 || || | ||| ||| | ||||| || | ||| | ||| || || ||||| || Sbjct 661 GACGTTGTCAATTGTGTCAGAGCTCTCCACCTCCAAAGTAATGGTTTTACCAGTCAAGGT 602 Query 64426 TTTTACGAAAATTTGCATT 64444 || || ||||| |||||| Sbjct 601 CTTCACAAAAATCTGCATT 583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499606864468560