Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05] 6,074 sequences; 234,039,246 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq26 91.5 2e-13 >seq26 Length=2022356 Score = 91.5 bits (100), Expect = 2e-13 Identities = 180/262 (69%), Gaps = 7/262 (3%) Strand=Plus/Minus Query 127532 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 127591 |||||||| || || || ||||| | || || ||||| | || ||||| | || Sbjct 1746688 TGGAGACCTTCATCTCGTGAGATTAACTCGTTTGAGAAAGTTAATCCAGGCATTAACCCG 1746629 Query 127592 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 127651 ||||| || ||||| || ||||| || || ||||||||||| ||||| ||||| || Sbjct 1746628 CGCTTTTTTAACCAAAATATCGCGCAGAAACTTCCAGAGAAGAAAATCCCTTCCACGCAA 1746569 Query 127652 GCGAACGCAAATAGACGCTCGGC-AAAGGAGCGGGACTTTGTATCAAACCACTTCATCGC 127710 || || || | ||| || ||||| |||| | | || || | ||| |||| || Sbjct 1746568 GCAAAAGCGATTAGCCGTTCGGCGAAAGTTTCCGAAC----CGTCGATCCATTTCAATGC 1746513 Query 127711 CCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTT 127770 ||||| || || || | | |||||| || || | || || | ||||| ||||| Sbjct 1746512 CCACTCAGCTTTCTTAGCCACACATGGCACTGTTTCGACGGCGTGGAAGAGCCGGTTCTT 1746453 Query 127771 TTCTGATGGA-TCTTTGATGTA 127791 ||| | |||| || |||||||| Sbjct 1746452 TTC-GTTGGAGTCCTTGATGTA 1746432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613460619465840