Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05] 6,074 sequences; 234,039,246 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq26 215 5e-51 seq5 134 1e-26 seq10 132 5e-26 seq4 118 1e-21 seq2 109 5e-19 seq14 98.7 1e-15 seq9 96.9 3e-15 seq1649 95.1 1e-14 >seq26 Length=2022356 Score = 215 bits (238), Expect = 5e-51 Identities = 420/611 (69%), Gaps = 17/611 (3%) Strand=Plus/Minus Query 132887 ACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946 ||| ||||||||| || |||||||| | || || || | || || | ||||| || Sbjct 1746711 ACAGCAAGCAAGCGAAATCGCAATGGAGACCTTCATCTCGTGAGATTAACTCGTTTGAGA 1746652 Query 132947 AAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCG 133006 |||| || || ||||| | ||||| ||||| | ||||||||| ||| |||||| || | Sbjct 1746651 AAGTTAATCCAGGCATTAACCCGCGCTTTTTTAACCAAAATATCGCGCAGAAACTTCCAG 1746592 Query 133007 AAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTT 133066 | ||||| | || || ||| || ||||| | || || ||| |||| || ||| Sbjct 1746591 AGAAGAAAATCCCTTCCACGCAAGCAAAAGCGATTAGCCGTTCGGCGAAAGT---TTCCG 1746535 Query 133067 TGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCAC--GGCATCGTTTC 133124 | | ||||||| || ||||| || || |||||| | | ||| |||| ||||| Sbjct 1746534 AACCGTCGATCCATTTCAATGCCCACTCAGC--TTTCTTAGCCACACATGGCACTGTTTC 1746477 Query 133125 GATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC---ACGTAGGTGTCGATGAG 133181 || ||||| || | ||| |||| ||| ||| | | ||| || || | ||| Sbjct 1746476 GACGGCGTGGAAGAGCCGG---TTCTTTTCGTTGGAGTCCTTGATGTAAGTTTCAAGGAG 1746420 Query 133182 GGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTA-AAAGCACC 133240 | |||||| || ||||| | || || ||||||||||| ||||| || || ||| | Sbjct 1746419 GAGACTATACATCTCGGAGTGGATATTTTCGATGGCGATTTGGAAGCCATAGAACGCA-C 1746361 Query 133241 GCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGC 133300 | |||||| | || ||||| | ||| || || | ||||||||| |||||| | Sbjct 1746360 GAGCCTCGGAGATTTGGACTTCCTTCATGAACCGGACGGCGAGATTTTCGAGGACGATAC 1746301 Query 133301 CGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCA 133360 | ||| ||| || || ||||| || ||||| ||||||| ||||| ||| |||| | | Sbjct 1746300 CATCGGAGGCTGCAAAGAAGGCGAGGACGTGAGTGATGAAGTGGCGTTCGCCGTCGGT-A 1746242 Query 133361 AGCG-CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGAC 133419 || | ||||||| ||| ||| || || || || || ||| |||||||||| || Sbjct 1746241 AGAGTTTCCCAGTGGCGTAGATCCGACGAGAGATCGACTTCTTCGGCGGTCCAAAAGGAG 1746182 Query 133420 GCCTCGGCTTTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAAC 133479 || |||||||| |||||||| ||| | | || ||||| || || || || |||| Sbjct 1746181 GCTTCGGCTTTCTTGTACATTTCCCATACTTGCGGGTATTGGATCGGGAACATGCAAAAC 1746122 Query 133480 CGGCGGGGGTT 133490 ||| ||||| Sbjct 1746121 CGGTCCGGGTT 1746111 >seq5 Length=11097736 Score = 134 bits (148), Expect = 1e-26 Identities = 171/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 38240 aaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| ||||| || ||||| ||||| || ||||| || ||||| ||| |||| ||||| | Sbjct 4356802 AAAGATGCAGATCTTCGTCAAAACCCTAACGGGGAAGACCATAACCCTCGAGGTCGAATC 4356861 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG- 38358 | | |||| | | | | | |||| || |||| ||||| || ||||| ||||||| Sbjct 4356862 CTCTGACACCATCGACAATGTCAAAGCCAAGATCCAAGACAAGGAAGGAAT-CCCGCCGG 4356920 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||| || || ||||| | ||| ||||| ||||| || |||| |||||| | ||||| Sbjct 4356921 ACCAGCAACGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGCACCTTAGCCGACT 4356980 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||||||| |||||| | || || || | || || ||| | || || ||| Sbjct 4356981 ACAACATCCAGAAGGAATCCACACTTCACCTCGTTCTCCGTCTCAGGGGTGGC 4357033 >seq10 Length=8461613 Score = 132 bits (146), Expect = 5e-26 Identities = 146/192 (76%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||| | || ||||||||||||||| |||| |||||| || Sbjct 2239249 ATGCAAATCTTCGTCAAAACTTTGACCGGCAAAACCATCACCCTCGAAGTCGAGAGTTCC 2239190 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || |||| | || | ||||||| ||||| || || || || ||||||| Sbjct 2239189 GACACGATTGACAACG-TCAAGGCCAAAATCCAGGACAAGGAAGGCATCCCTCCCGACCA 2239131 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||||||||| | ||| || ||||||||||| |||| || || | || || || Sbjct 2239130 ACAGCGGCTCATCTTCGCCGGGAAACAGCTGGAGGACGGCCGTACTTTGGCTGATTATAA 2239071 Query 38423 CATCCAAAAGGA 38434 |||||||||||| Sbjct 2239070 CATCCAAAAGGA 2239059 >seq4 Length=12062019 Score = 118 bits (130), Expect = 1e-21 Identities = 168/234 (72%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 38238 aaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAG 38297 || || ||||| || ||||| ||||| | || ||||||||||||||| |||| || ||| Sbjct 4154215 AACAAGATGCAGATCTTCGTGAAAACCTTAACCGGCAAAACCATCACCCTCGAGGTGGAG 4154274 Query 38298 GCCACCGACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGC 38356 | | |||| | | | |||| | || | || |||| ||||| || || ||||| | Sbjct 4154275 AGCTCAGACACCATCGACAACG-TCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCC 4154333 Query 38357 CGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGA 38416 || |||||||| | || | ||| ||||| || || || |||| || ||||| || Sbjct 4154334 TGATCAACAGCGCTTGATCTTCGCCGGCAAGCAACTTGAAGACGGCCGAACCCTTGCGGA 4154393 Query 38417 CTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| |||||||||||| |||| || || |||| || ||| | | ||||| Sbjct 4154394 TTACAATATCCAAAAGGAATCGACTCTCCACCTGGTACTCCGTCTCCGTGGCGG 4154447 Score = 116 bits (128), Expect = 4e-21 Identities = 155/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || ||||| |||||||| | || ||||| | | Sbjct 4154449 ATGCAGATCTTCGTCAAAACCCTAACCGGCAAGACCATCACTCTTGAAGTCGAAAGCTCT 4154508 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| |||| | || |||| ||||| ||||| || || | ||||| Sbjct 4154509 GACACGATCGACAACG-TTAAGGCCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCA 4154567 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | ||| ||||| ||||| || |||| |||||||| ||||||||| Sbjct 4154568 ACAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTGGCCGACTACAA 4154627 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 ||||| |||||| | || || || | ||||| Sbjct 4154628 TATCCAGAAGGAATCAACCCTTCACCTTGTGCT 4154660 >seq2 Length=14367614 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || ||||| || || ||||| ||||||||| | || || ||| | | Sbjct 9073821 ATGCAAATCTTTGTGAAAACCCTTACAGGCAAGACCATCACCCTTGAGGTTGAGAGCTCT 9073880 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| || ||||| || ||||||| Sbjct 9073881 GACACTATTGACAATGTCAAGGCTAAGATCCAAGACAAGGAAGGAATCCCTCCCGACCAG 9073940 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || |||| |||| || ||||||||||| || || | || ||||| ||||| ||| Sbjct 9073941 CAAAGGCTTATTTTTGCTGGCAAACAGCTTGAAGATGGCCGAACCCTAGCTGACTATAAC 9074000 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| | || || || |||||||| || Sbjct 9074001 ATCCAGAAGGAGTCCACCCTCCACTTGGTGCTTCG 9074035 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || ||||| || || || |||||| | || || ||| | | Sbjct 9074049 ATGCAAATCTTTGTCAAGACTCTCACAGGAAAGACTATCACCTTGGAGGTTGAGAGCTCT 9074108 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| ||||| || ||||| || | |||||| Sbjct 9074109 GACACTATTGATAATGTCAAGGCTAAGATCCAAGACAAGGAAGGAATCCCTCCTGACCAA 9074168 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || |||| |||| || ||||||||||| || || | || ||||| ||||| ||| Sbjct 9074169 CAAAGGCTTATTTTTGCTGGCAAACAGCTTGAAGATGGCCGAACCCTAGCTGACTATAAC 9074228 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| ||||| | || || ||||||||||| ||| Sbjct 9074229 ATCCAGAAGGAGTCCACCCTCCATTTGGTGCTTCGT 9074264 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || ||||| || || || |||||| | || || ||| | | Sbjct 9074277 ATGCAAATCTTTGTCAAGACACTCACAGGAAAGACTATCACCTTGGAGGTTGAGAGCTCT 9074336 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | |||| || |||| ||||| || ||||| || | || ||| Sbjct 9074337 GATACAATTGATAATGTCAAAGCTAAGATCCAAGACAAGGAAGGAATCCCTCCTGATCAA 9074396 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || |||| || | || ||||||||||| || |||| |||||||| ||||| ||| Sbjct 9074397 CAAAGGCTTATCTTTGCTGGCAAACAGCTTGAAGACGGTCGCACCCTAGCTGACTATAAC 9074456 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| || || ||||||||||| ||| | |||| ||| Sbjct 9074457 ATCCANNNNNNNNNNACCCTCCATTTGGTGCTTCGTCTTCGAGGTGGC 9074504 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || || ||||| || || ||||| | || || ||| | Sbjct 9074733 ATGCAAATTTTTGTGAAGACTCTTACGGGAAAGACTATCACATTGGAGGTTGAGAGTTCA 9074792 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || | ||| |||| || || ||||| || || | ||||| Sbjct 9074793 GATACCATTGATAATGTGAAGGCAAAGATCCAAGATAAGGAGGGTATCCCACCAGACCAG 9074852 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || |||| || | || ||||| ||||| || || | | | || ||| ||||| || Sbjct 9074853 CAAAGGCTTATCTTTGCTGGCAAGCAGCTTGAAGATGGGAGAACTCTCGCTGACTATAAT 9074912 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTT 38461 |||||||||||| | || || || |||||| ||||||| Sbjct 9074913 ATCCAAAAGGAATCTACCCTTCACTTGGTGTTGCGTTT 9074950 >seq14 Length=6982396 Score = 98.7 bits (108), Expect = 1e-15 Identities = 157/220 (71%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || ||||| |||||||| ||| | || ||||| | || Sbjct 1120700 ATGCAAATCTTCGTCAAGACCCTGACGGGTAAAACCATAACCCTGGAAGTCGAAAGCTCC 1120641 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| || ||||| || | ||||| Sbjct 1120640 GACACCATTGACAACG-TGAAGGCCAAGATCCAGGACAAGGAAGGAATCCCACCGGACCA 1120582 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACG-ACTACA 38421 || |||| || | || || || ||||| || |||| || | ||| | || | |||| Sbjct 1120581 GCAAAGGCTTATCTTTGCTGGGAAGCAGCTCGAGGACG-GCAGAACCTTAGCGGATTACA 1120523 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTT 38461 ||||||||||||| | || || || | || || ||||| Sbjct 1120522 ACATCCAAAAGGAGTCAACCCTCCACCTCGTCCTCCGTTT 1120483 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || || |||||||||||||| ||| | || || || | || Sbjct 1120472 ATGCAAATCTTTGTCAAGACCCTGACGGGCAAAACCATAACCTTGGAAGTTGAAAGCTCC 1120413 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| |||||||| ||||||||| | ||||| Sbjct 1120412 GACACCATCGACAACG-TGAAGGCCAAGATCCAGGACAAAGAAGGAATTCCCCCGGACCA 1120354 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || |||| || | || || || || || || |||| || || | || ||||| Sbjct 1120353 GCAAAGGCTTATCTTTGCTGGGAAGCAACTCGAGGACGGCCGAACTTTGGCGGATTACAA 1120294 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGT 38452 |||||||||||| | || || || |||| Sbjct 1120293 CATCCAAAAGGAGTCAACCCTCCACCTGGT 1120264 >seq9 Length=8984705 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 38243 aaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || || || ||||| | || || ||||||||||| | || || ||| | | Sbjct 7046188 AATGCAGATTTTTGTGAAAACCTTGACTGGTAAAACCATCACTTTGGAGGTGGAGAGCTC 7046247 Query 38303 CGACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| || |||| | |||| || |||| || || ||||| || || | |||| Sbjct 7046248 TGACACAATTGACAACG-TCAAAGCCAAGATCCAAGATAAGGAGGGTATCCCACCTGACC 7046306 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||| || | |||| ||| || || ||||| || || | | | || || ||||| | Sbjct 7046307 AACAGAGGTTGATTTTCGCTGGAAAGCAGCTCGAAGATGGGAGGACACTTGCAGACTATA 7046366 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||| | | || ||||||||||| |||| | ||||| || Sbjct 7046367 ACATCCAAAAG--ATCAACCCTGCATTTGGTTTTGCGCCTTAGAGGAGG 7046413 Score = 87.8 bits (96), Expect = 2e-12 Identities = 152/216 (70%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| ||||| || || || | | ||| |||||||||||| | || || ||| | | Sbjct 7053306 ATGCAGATATTTGTCAAGACCTTGATGGG-AAAACCATCACCCTGGAGGTTGAGAGCTCA 7053364 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || || | | |||| ||| || | ||||| ||||| ||||| | ||||| Sbjct 7053365 GACACGATTGACAATG-TGAAAGCAAAGATTCAGGACAAGGAGGG-ATTCCTCCAGACCA 7053422 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | || ||||| ||| |||| || | ||||| || |||||||| Sbjct 7053423 GCAGAGGTTGATCTTTGCTGGCAAGCAGTTGGAGGATGGTCGCACTCTGGCTGACTACAA 7053482 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| | || |||||| | || || || Sbjct 7053483 TATCCAGAAGGAGTCCACCCTGCATCTTGTCCTTCG 7053518 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || ||||| || || || || ||| | || || ||| | Sbjct 7052852 ATGCAAATTTTTGTCAAGACCCTCACTGGAAAGACTATTACCTTGGAAGTTGAGAGTTCT 7052911 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | |||| || |||| ||||| || || || || | || ||| Sbjct 7052912 GATACCATTGACAATGTAAAAGCTAAGATCCAGGACAAGGAAGGTATCCCTCCAGATCAA 7052971 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| |||| || | || ||||||||| |||| || | | | || || || ||||| Sbjct 7052972 CAGAGGCTGATATTTGCTGGCAAACAGTTGGAGGATGGGAGGACACTTGCAGATTACAAT 7053031 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||| || | || || || |||||||||||| || | || || Sbjct 7053032 ATCCAAAAAGAGTCAACCCTCCACTTGGTGCTGCGTCTGCGTGGAGG 7053078 Score = 82.4 bits (90), Expect = 8e-11 Identities = 151/216 (70%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| ||||| | || || | || || |||||||||||| | || || || | | | Sbjct 7046415 ATGCAGATATTTTTCAAGACCTTGACTGGGAAAACCATCACCCTGGAGGTTGAAG-CTCA 7046473 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || || | | |||| ||| || | ||||| ||||| ||||| | ||||| Sbjct 7046474 GACACGATTGACAATG-TGAAAGCAAAGATTCAGGACAAGGAGGGGATTCCTCCAGACCA 7046532 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | || ||||| || |||| || | ||||| || |||||||| Sbjct 7046533 GCAGAGGTTGATCTTTGCTGGCAAGCA-TTGGAGGATGGTCGCACTCTGGCTGACTACAA 7046591 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| | || |||||| |||| || || Sbjct 7046592 TATCCAGAAGGAGTCCACCCTGCATCTGGTCCTTCG 7046627 Score = 82.4 bits (90), Expect = 8e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| ||||| || ||||| ||||| || ||||||||||| | || || ||| | Sbjct 7052624 ATGCAGATATTTGTGAAAACTCTCACTGGGAAAACCATCACTTTAGAGGTGGAGAGTTCA 7052683 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || | || || | ||||| ||||| || || | ||||| Sbjct 7052684 GATACCATCGATAATGTGAAGGCGAAGATTCAGGACAAGGAGGGTATCCCACCAGACCAG 7052743 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| || | |||| || || |||||||| || || | | ||||| ||||| ||| Sbjct 7052744 CAGAGGTTAATTTTTGCCGGAAAACAGCTTGAAGATGGCAGAACCCTTGCAGACTATAAC 7052803 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 || || ||||| | || || |||||||| |||| Sbjct 7052804 ATTCAGAAGGAGTCAACCCTCCATTTGGTTTTGCG 7052838 >seq1649 Length=3542 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| ||||| || || || | || || |||||||||||| | || || ||| | | Sbjct 812 ATGCAGATATTTGTCAAGACCTTGACTGGGAAAACCATCACCCTGGAGGTTGAGAGCTCA 871 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || || | | |||| ||| || | ||||| ||||| ||||| | ||||| Sbjct 872 GACACGATTGACAATG-TGAAAGCAAAGATTCAGGACAAGGAGGGGATTCCTCCAGACCA 930 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | || ||||| ||| |||| || | ||||| || |||||||| Sbjct 931 GCAGAGGTTGATCTTTGCTGGCAAGCAGTTGGAGGATGGTCGCACTCTGGCTGACTACAA 990 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| | || |||||| | || || || Sbjct 991 TATCCAGAAGGAGTCCACCCTGCATCTTGTCCTTCG 1026 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38243 aaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || || || || || | || || |||||||| || | || || ||| | | Sbjct 583 AATGCAGATTTTTGTGAAGACCTTGACTGGTAAAACCATTACTTTGGAGGTGGAGAGCTC 642 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | |||| | |||| || |||| || || ||||| || || | |||| Sbjct 643 TGACACAATTGACAACG-TCAAAGCCAAGATCCAAGATAAGGAGGGTATCCCACCTGACC 701 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||| || | |||| || || || ||||| || || | | | || || ||||| | Sbjct 702 AACAAAGGTTGATTTTTGCTGGGAAGCAGCTTGAAGATGGGAGGACACTTGCAGACTATA 761 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| | || ||||||||||| |||| | ||||| || Sbjct 762 ACATCCAAAAGGAGTCAACCCTGCATTTGGTTTTGCGCCTTAGAGGAGG 810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500134824380160