Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05] 6,074 sequences; 234,039,246 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq26 100 3e-16 >seq26 Length=2022356 Score = 100 bits (110), Expect = 3e-16 Identities = 166/240 (69%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 119507 ATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCC 119566 ||| || |||||||| || ||||| | ||| || ||| | ||||||||| | || Sbjct 1746689 ATGGAGACCTTCATCTCGTGAGATTAACTCGTTTGAGAAAGTTAATCCAGGCATTAACCC 1746630 Query 119567 TCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACA 119626 | || |||| |||||| || || || ||||||||||| ||||| || || ||||| || Sbjct 1746629 GCGCTTTTTTAACCAAAATATCGCGCAGAAACTTCCAGAGAAGAAAATCCCTTCCACGCA 1746570 Query 119627 GGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTCGAACCACTTGAGAGCCCA 119686 || ||||||| ||| || || || |||| | || ||||| ||| || | ||||| Sbjct 1746569 AGCAAAAGCGATTAGCCGTTCGGCGAAAGTTTCCGAACCGTCGATCCATTTCAATGCCCA 1746510 Query 119687 GTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCTTCTTTTC 119746 | || || | | || || || |||| || ||| | ||| || | |||||||| Sbjct 1746509 CTCAGCTTTCTTAGCCACACATGGCACTGTTTCGACGGCGTGGAAGAGCCGGTTCTTTTC 1746450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588931281997200