Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05] 6,074 sequences; 234,039,246 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq26 95.1 2e-14 >seq26 Length=2022356 Score = 95.1 bits (104), Expect = 2e-14 Identities = 179/261 (69%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 25478 TATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTGG 25537 ||||||| ||||||||||| || || ||| |||||||||||||| | ||||| Sbjct 1746154 TATGGGAAATGTACAAGAAAGCCGAAGCCTCCTTTTGGACCGCCGAAGAAGTCGATCTCT 1746213 Query 25538 CCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTACG 25597 | ||| | | |||| | |||| || | | ||| | || || ||| ||| Sbjct 1746214 CGTCGGATCTACGCCACTGGGAAACTCTTACCGACGGCGAACGCCACTTCATCACTCACG 1746273 Query 25598 TGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTCA 25657 | | || |||||||||||||| |||||||| || ||| ||||| || | |||| Sbjct 1746274 TCCTCGCCTTCTTTGCAGCCTCCGATGGTATCGTCCTCGAAAATCTCGCCGTCCGGTTCA 1746333 Query 25658 CCAGGGAAGTGCAGTACGTGGAGGCCAAGTGT-TTCTACGGTTTCCAGATGGCCATCGAA 25716 | |||||| || | ||||| ||| ||||| || ||||| || ||||||||| Sbjct 1746334 TGAAGGAAGTCCAAATCTCCGAGGCTC-GTGCGTTCTATGGCTTCCAAATCGCCATCGAA 1746392 Query 25717 AATGTGCACTCTGAGGTGTAT 25737 ||| | ||||| ||| ||||| Sbjct 1746393 AATATCCACTCCGAGATGTAT 1746413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928774277458560