Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05] 6,074 sequences; 234,039,246 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq31 89.7 6e-13 >seq31 Length=1289616 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 18119 CTCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTA 18178 ||||| | ||||||||||||||||||| ||||| ||| ||||||| || |||||||| Sbjct 503668 CTCCCGTTGTTCCTCAGTAGCTCAGCGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTA 503609 Query 18179 GGTTCAAATCCTACCTGGGGAG 18200 ||||| |||||||| || |||| Sbjct 503608 GGTTCGAATCCTACTTGAGGAG 503587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561205387245600