Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05] 6,074 sequences; 234,039,246 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq31 87.8 2e-12 >seq31 Length=1289616 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/82 (84%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 35501 AATCATATAACTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGC 35560 ||||| || |||| || |||||||| ||||||||||||| || ||||||| ||| || Sbjct 503579 AATCAAAT--CTCCTCAAGTAGGATTCGAACCTACGACCAGTCAGTTAACAGCCGACCGC 503636 Query 35561 TCTGCCGCTGAGCTACTGAGGA 35582 ||| |||||||||||||||||| Sbjct 503637 TCTACCGCTGAGCTACTGAGGA 503658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572010966769680