Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05] 6,074 sequences; 234,039,246 total letters Query= NC_021530.1 Length=171407 Score E Sequences producing significant alignments: (Bits) Value seq8 84.2 2e-11 >seq8 Length=9139585 Score = 84.2 bits (92), Expect = 2e-11 Identities = 134/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 158740 AGAGGATCAATACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAATTACTCTTG 158799 ||| ||| ||||||||| ||| ||| || |||| || |||||||| ||||| || Sbjct 6051970 AGACGATGTATACATTCTTGACCAAGCCGAGGAAGAGGGTATTGATATTCCATACTCATG 6051911 Query 158800 TCGTGCTGGTGCTTGCTCTTCATGTGCAGGTAAAATTGTATCTGGAACTGTTGATCAGAG 158859 | |||||| ||||||||||||| | || || || | || |||| |||||| Sbjct 6051910 CAGGGCTGGTTCTTGCTCTTCATGCACTGGAAAGGTTACAAAAGGTTCTGTGGATCAGTC 6051851 Query 158860 TGATCAGTCG-TTCTTAGACGATGATCAGATTGCAGCAGGATTTGTTCTTACGTGTGTAG 158918 ||| | || | ||| | || ||||| ||||| | | || |||||||| || ||||| | Sbjct 6051850 TGA-CGGTAGCTTCCTCGATGATGAGCAGATGGATTCTGGTTTTGTTCTCACTTGTGTCG 6051792 Query 158919 CATATCCAAC 158928 | || || || Sbjct 6051791 CTTACCCCAC 6051782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548332764673680