Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05] 6,074 sequences; 234,039,246 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq4 107 2e-18 >seq4 Length=12062019 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 151995 GATGACCAGTACATCTTGGATGCTGCTGAGGAACAAGGAGTTGATATGAACTACTCTTGT 152054 ||||| | |||||||| |||||||||||||| ||||||||| || ||| ||||| Sbjct 8093541 GATGATAAATACATCTTAGATGCTGCTGAGGAGGCAGGAGTTGACCTGCCCTATTCTTGC 8093482 Query 152055 CGTGCTGGTGCATGTTCCTCTTGTGCTGGTAAGATTGTGAGTGGTACAGTTGATCAGAGT 152114 | ||||| || || ||| | |||||||| ||||| | ||| |||| ||||| | Sbjct 8093481 AGGGCTGGAGCTTGCTCCACATGTGCTGGGAAGATAATTTCAGGTTCAGTGGATCAATCT 8093422 Query 152115 GACCAATCATTCTTGGATGATGACCAGATTGAATCAGGATTCGTGCTGACCTGTGTTGCA 152174 ||| || ||| | |||||| | || || || |||| |||||||| |||||| || Sbjct 8093421 GACGGTTCCTTCCTTGATGATAAACAAATGGAGGAGGGATATGTGCTGACTTGTGTTTCA 8093362 Query 152175 TATCCAACTTCTGA 152188 || || || || || Sbjct 8093361 TACCCGACCTCAGA 8093348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549580669919280