Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05]
6,074 sequences; 234,039,246 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq9 96.9 3e-15
>seq9
Length=8984705
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||||||||||||| | | ||||||| || |||||||| ||||| | ||| | |
Sbjct 7052838 CGCAAAACCAAATGGAGGGTTGACTCCTTCTGAATGTTATAGTCTGCAAGGGTTCTGCCA 7052779
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| |||||||| |||| | | |||| | ||| || ||||| || || || || ||
Sbjct 7052778 TCTTCAAGCTGTTTTCCGGCAAAAATTAACCTCTGCTGGTCTGGTGGGATACCCTCCTTG 7052719
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||| || |||| | || | ||||| | |||||| || | || |
Sbjct 7052718 TCCTGAATCTTCGCCTTCACATTATCGATGGTATCTGAACTCTCCACCTCTAAAGTGATG 7052659
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
||||| ||||| |||||||| | || |||||||||
Sbjct 7052658 GTTTTCCCAGTGAGAGTTTTCACAAATATCTGCATG 7052623
Score = 82.4 bits (90), Expect = 7e-11
Identities = 149/217 (69%), Gaps = 1/217 (0%)
Strand=Plus/Minus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||||||||||||| | | ||||||| || || ||||| ||||| | ||| | |
Sbjct 7045948 CGCAAAACCAAATGGAGGGTTGACTCCTTCTGGATGTTATAGTCTGCAAGGGTTCTGCCA 7045889
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| |||||||| || | | | |||| | ||| || ||||| || || || || ||
Sbjct 7045888 TCTTCAAGCTGTTTTCCAGCAAAAATTAACCTCTGCTGGTCTGGTGGGATACCCTCCTTG 7045829
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT-CAG 132087
|| ||| ||| |||| | || | ||||| | |||||| || | || |
Sbjct 7045828 TCCTGAATCTTTGCCTTCACATTGTCGATGGTATCCGAACTCTCCACCTCCAAAGTGGAT 7045769
Query 132088 CGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
||||| || || |||||||| | || |||||||||
Sbjct 7045768 GGTTTTCCCGGTGAGAGTTTTCACAAATATCTGCATG 7045732
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476575013294640
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |