Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05] 6,074 sequences; 234,039,246 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq10 82.4 7e-11 >seq10 Length=8461613 Score = 82.4 bits (90), Expect = 7e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| || || || || |||||| | ||||| | || || ||| Sbjct 2238793 ATGCAGATTTTTGTCAAGACCTTGACTGGAAAAACAATCACCTTGGAGGTGGAAAGTTCG 2238734 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| ||||| | || || ||| ||| ||||| || || || || || |||||| Sbjct 2238733 GATACAATCGATAACGTCAAGGCAAAGATTCAGGATAAGGAAGGAATCCCCCCAGATCAG 2238674 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGC-GATTACAA 25353 ||||| || || | | ||| |||||| | || |||| || | | | ||| ||||| || Sbjct 2238673 CAAAGGCTTATCTTTGCCGGGAAACAATTGGAGGATGGGAGGACT-TTAGCTGATTATAA 2238615 Query 25354 TATTCAAAAAGAATCCACCATTCA 25377 ||||| ||||| || ||| |||| Sbjct 2238614 CATTCAGAAAGAGTCTACCCTTCA 2238591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445060606207680