Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05] 6,074 sequences; 234,039,246 total letters Query= NC_026924.1 Length=174885 Score E Sequences producing significant alignments: (Bits) Value seq4 122 1e-22 >seq4 Length=12062019 Score = 122 bits (134), Expect = 1e-22 Identities = 164/225 (73%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 161126 TACATTTTAGATGCAGCAGAAGAGGCAGGAGTTGATATTAACTATTCTTGTCGTGCTGGT 161185 ||||| |||||||| || || |||||||||||||| | ||||||||| | ||||| Sbjct 8093532 TACATCTTAGATGCTGCTGAGGAGGCAGGAGTTGACCTGCCCTATTCTTGCAGGGCTGGA 8093473 Query 161186 GCTTGCTCTTCCTGTGCAGGTAAAATTATTTCAGGTACAGTAGACCAGTCTGACCAGTCC 161245 |||||||| | ||||| || || || ||||||||| |||| || || |||||| ||| Sbjct 8093472 GCTTGCTCCACATGTGCTGGGAAGATAATTTCAGGTTCAGTGGATCAATCTGACGGTTCC 8093413 Query 161246 TTCTTGGATGATGACCAGATTGAATCTGGATTCCTTTTGACATGTGTTGCATATCCTACT 161305 ||| | |||||| | || || || |||| | |||| |||||| |||| || || Sbjct 8093412 TTCCTTGATGATAAACAAATGGAGGAGGGATATGTGCTGACTTGTGTTTCATACCCGACC 8093353 Query 161306 AGCGATTGTGTGATTCAAACTGAGCAAG--AGGAGAATCTGTACT 161348 || |||| ||| || ||| | |||| ||| | |||| |||| Sbjct 8093352 TCAGACTGTGAGATCCACACTCA-CAAGGAAGGTG-ATCTCTACT 8093310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559461519658800