Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05] 6,074 sequences; 234,039,246 total letters Query= NC_027130.1 Length=172688 Score E Sequences producing significant alignments: (Bits) Value seq4 96.9 4e-15 >seq4 Length=12062019 Score = 96.9 bits (106), Expect = 4e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 159544 AATACATTTTAGACGCTGCTGAGGAAGCAGGTGTAGATGCTCCGTATTCATGTCGTGCTG 159603 ||||||| ||||| ||||||||||| ||||| || || || ||||| || | |||| Sbjct 8093534 AATACATCTTAGATGCTGCTGAGGAGGCAGGAGTTGACCTGCCCTATTCTTGCAGGGCTG 8093475 Query 159604 GTGCTTGTAGCACATGTGCTGGTAAGATTGAGAGCGGGACAGTTGACCAAAGTGACCAAT 159663 | ||||| |||||||||||| ||||| || |||| || ||| |||| | Sbjct 8093474 GAGCTTGCTCCACATGTGCTGGGAAGATAATTTCAGGTTCAGTGGATCAATCTGACGGTT 8093415 Query 159664 CTTTCTTGGACGATGATCAACTCGCTGAAGGATTTCTTCTCACTTGTGTCTCCTACCCTA 159723 | ||| | || ||| | ||| | | || |||| | | || |||||||| || ||||| | Sbjct 8093414 CCTTCCTTGATGATAAACAAATGGAGGAGGGATATGTGCTGACTTGTGTTTCATACCCGA 8093355 Query 159724 CATCAGAC 159731 | |||||| Sbjct 8093354 CCTCAGAC 8093347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552431653441920