Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Herrania_20umbratica_20[refseq_20GCF_5F002168275.1_202017-06-05] 6,074 sequences; 234,039,246 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq4 95.1 2e-14 >seq4 Length=12062019 Score = 95.1 bits (104), Expect = 2e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 170989 CTGAAGATCAATATATTCTTGATGCTGCTGAAGAAGCAGGATTTGATTTGAACTATTCGT 171048 |||| ||| |||| || | ||||||||||| || |||||| |||| || |||||| | Sbjct 8093543 CTGATGATAAATACATCTTAGATGCTGCTGAGGAGGCAGGAGTTGACCTGCCCTATTCTT 8093484 Query 171049 GTCGTGCTGGTGCTTGTTCGACCTGTGCTGGGAAAATTGAGAGTGGTTCTGTTGATCAAT 171108 | | ||||| ||||| || || ||||||||||| || ||||| || ||||||| Sbjct 8093483 GCAGGGCTGGAGCTTGCTCCACATGTGCTGGGAAGATAATTTCAGGTTCAGTGGATCAAT 8093424 Query 171109 CCGATCAATCTTTCCTTGATGATGATCAGATTGAATCAGGTTTCATTCTGACCTGCGTCT 171168 | || || |||||||||||| | || || || || | | ||||| || || | Sbjct 8093423 CTGACGGTTCCTTCCTTGATGATAAACAAATGGAGGAGGGATATGTGCTGACTTGTGTTT 8093364 Query 171169 CATATCCTAC 171178 |||| || || Sbjct 8093363 CATACCCGAC 8093354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622023169304880