Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hevea_20brasiliensis_20[genbank_20GCA_5F001654055.1_202016-06-01] 7,452 sequences; 1,373,365,927 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq1209 82.4 7e-11 seq949 82.4 7e-11 >seq1209 Length=217254 Score = 82.4 bits (90), Expect = 7e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 16235 CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGA 16294 |||||||| ||||||||||| ||||| || || ||||||||| ||||| ||||| | | Sbjct 71957 CAAGCAAAGTCACAATGCAAGCCTTCATCTCTGGATATTAACTCATTTGAGAATGTCAAA 71898 Query 16295 CCTGGCATTAGTCCTCGTTTTTTAATCCAAAATAT 16329 |||||||| | || | ||| |||| ||| || || Sbjct 71897 CCTGGCATCAAGCCCCTTTTCTTAAGCCAGAAAAT 71863 >seq949 Length=384296 Score = 82.4 bits (90), Expect = 7e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 16235 CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGA 16294 |||||||| ||||||||||| ||||| || || ||||||||| ||||| ||||| | | Sbjct 269358 CAAGCAAAGTCACAATGCAAGCCTTCATCTCTGGATATTAACTCATTTGAGAATGTCAAA 269417 Query 16295 CCTGGCATTAGTCCTCGTTTTTTAATCCAAAATAT 16329 |||||||| | || | ||| |||| ||| || || Sbjct 269418 CCTGGCATCAAGCCCCTTTTCTTAAGCCAGAAAAT 269452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462468917007200