Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hevea_20brasiliensis_20[genbank_20GCA_5F001654055.1_202016-06-01] 7,452 sequences; 1,373,365,927 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq320 105 1e-17 >seq320 Length=1281786 Score = 105 bits (116), Expect = 1e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 248808 AGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAAT 248867 |||||| || || |||| ||||| |||||||| || |||| || || || | || | Sbjct 82378 AGATTTTGACTATGATTACTTTGGCTTCAAAACTCTTGAGAGGTCCTACCTTTTGAAGGT 82319 Query 248868 TGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCA 248927 | |||| || || || ||| || || |||||||||||| | || ||||| || || || Sbjct 82318 TAATGGGAAAATTGTAGAAAGACCACAACACATGTTGATGAGGGTTGCTGTTGGTATCCA 82259 Query 248928 CAAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGAC 248987 ||| |||||||| || ||| || | || ||| | ||| | | || ||| | || Sbjct 82258 CAAAGATGACATTGACTCCGTTGTCAAAACATACTACTTGATGTCTCAGCGTTGGTTCAC 82199 Query 248988 ACATGCCACACCGACGCTCTTCAACGCCGGTAC 249020 |||||| || || ||||| ||||| || || || Sbjct 82198 ACATGCTACCCCTACGCTTTTCAATGCTGGAAC 82166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073663878126336