Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hevea_20brasiliensis_20[genbank_20GCA_5F001654055.1_202016-06-01] 7,452 sequences; 1,373,365,927 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq1759 82.4 5e-11 >seq1759 Length=69365 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 33143 CCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGAC 33202 || || || || || | || | |||||| || || || || |||||||| ||||||| | Sbjct 30467 CCTCCCCTCAATCGGAGAACGAGATGCAAGGTGGATTCCTTCTGTATATTATAATCAG-C 30525 Query 33203 AAATTGAGT--TGG--TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGT 33258 || | || || || |||| |||||||||| || || || ||||||||||| | Sbjct 30526 AA---GGGTCCTGCCATCCTCCAGTTGCTTTCCAGCGAAGATCAAGCGTTGCTGGTCAGG 30582 Query 33259 GGGTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318 || |||||||| || || ||| ||| || | | || |||||| | | Sbjct 30583 AGGGATGCCTTCCTTGTCCTGGATCTTAGCTTTGACATTGTCGATGGTGTCGGAGCTCTC 30642 Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||||| ||||| || || || |||||||| || ||||| || ||||| Sbjct 30643 CACTTCCAGGGTTATGGTCTTGCCGGTAAGAGTCTTGACGAAGATCTGCAT 30693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318748648219896