Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hevea_20brasiliensis_20[genbank_20GCA_5F001654055.1_202016-06-01] 7,452 sequences; 1,373,365,927 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq68 84.2 2e-11 >seq68 Length=2695109 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| ||||| ||||| ||||| ||||| ||||| ||| | || ||| | | Sbjct 1666431 ATGCAAATCTTTGTGAAAACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAAAGCTCC 1666372 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||||| ||| |||| || ||| || ||| ||||| ||||| |||| || || Sbjct 1666371 GACACCATTG-ACAATGTGAAAACCAAGATTCAGGATAAGGAAGGAATCCCACCAGACCA 1666313 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| || | || | ||| |||||||| | || |||| || | || || ||||| Sbjct 1666312 GCAGAGGTTGATCTTTGCTGGCAAACAGCTTGAGGATGGACGCACTCTTGCTGACTATAA 1666253 Query 115465 CATTCAAAAAGAGTCTAC 115482 ||||||||| ||||| || Sbjct 1666252 CATTCAAAAGGAGTCCAC 1666235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425305369726240