Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hevea_20brasiliensis_20[genbank_20GCA_5F001654055.1_202016-06-01] 7,452 sequences; 1,373,365,927 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq61 89.7 4e-13 >seq61 Length=2804743 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || |||| || |||||||||| ||| || ||| ||| |||||||||||||| |||| | Sbjct 1592654 CCACCTCGGAGGCGCAGCACCAAATGCAGGGTGGACTCTTTCTGAATGTTGTAGTCTG-C 1592596 Query 33961 AATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 || || || || || || | || || || ||||| || || | ||||||||| || Sbjct 1592595 AAGAGTACGGTCATCTTCAAGCTGTTTCCCAGCAAAGATAAGCCTCTGCTGATCAGGTGG 1592536 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCA 34079 | | ||| |||||| ||| || ||||| | | |||||| ||| Sbjct 1592535 GATCCCCTCCTTGTCCTGAATCTTAGCCTTAACATTGTTAATGGTATCAGAGCTTTCAAC 1592476 Query 34080 TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 ||| | || || || || || || || |||||||||||||||||||| Sbjct 1592475 TTCCAAAGTGATGGTCTTCCCTGTAAGAGTTTTCACAAAGATTTGCAT 1592428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397026338296504