Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hevea_20brasiliensis_20[genbank_20GCA_5F001654055.1_202016-06-01] 7,452 sequences; 1,373,365,927 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq262 93.3 5e-14 seq3681 89.7 6e-13 seq3123 89.7 6e-13 >seq262 Length=1443145 Score = 93.3 bits (102), Expect = 5e-14 Identities = 168/241 (70%), Gaps = 16/241 (7%) Strand=Plus/Minus Query 10838 TTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTA---TCAAAGCCATCCATCTCAGTC 10894 || || || || ||||||| ||| || || |||| ||||| |||||||| || ||| Sbjct 905627 TTAGTAGCTGCAATGACAATGATACCAGT---GTTACCCTCAAAACCATCCATTTCTGTC 905571 Query 10895 AAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGCATACCA---CCCGCACTG 10951 || || || || | ||| ||||| | ||||||||| | |||| || | || Sbjct 905570 AAAAGCTGGTTAAGGGTCTGTTCTCTTTCATCATTTCCTCC---ACCAATGCCGGTACCT 905514 Query 10952 CGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGG 11011 | |||| | || || || ||||||||||| | || || || || || |||||| | Sbjct 905513 CTTTGCCTTCCAACAGCATCAATTTCATCCACAAATACAATGCAAGGAGCATTTTCTTTG 905454 Query 11012 GCAACTTC--AAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAA 11069 || |||| |||| ||| ||||| || |||||| ||||| |||||||| || |||| Sbjct 905453 GC--CTTCTTGAAGAGATCACGGACCCTAGAGGCACCAACACCAACAAACATCTCAACAA 905396 Query 11070 A 11070 | Sbjct 905395 A 905395 >seq3681 Length=11741 Score = 89.7 bits (98), Expect = 6e-13 Identities = 167/240 (70%), Gaps = 14/240 (6%) Strand=Plus/Plus Query 10838 TTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTA---TCAAAGCCATCCATCTCAGTC 10894 || || || || ||||||| ||| || || |||| ||||| |||||||| || ||| Sbjct 6548 TTAGTTGCTGCAATGACAATGATACCAGT---GTTACCCTCAAAACCATCCATTTCTGTC 6604 Query 10895 AAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGCATACCA---CCCGCACTG 10951 || || || || | ||| ||||| | ||||||||| | |||| || | || Sbjct 6605 AAAAGCTGGTTAAGGGTCTGTTCTCTTTCATCATTTCCTCC---ACCAATGCCAGTACCT 6661 Query 10952 CGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTC-ACG 11010 | |||| | || || || ||||||||||| | || || || || || ||| || | Sbjct 6662 CTTTGCCTTCCAACAGCATCAATTTCATCCACAAATACAATGCAAGGAGCATTATCTTTG 6721 Query 11011 GGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAA 11070 | | ||| ||| | ||| |||||||| |||||| ||||| |||||||| || ||||| Sbjct 6722 GCCTTCTTGAAA-AGATCACGGACTCTAGAGGCACCAACACCAACAAACATCTCAACAAA 6780 >seq3123 Length=17441 Score = 89.7 bits (98), Expect = 6e-13 Identities = 167/240 (70%), Gaps = 14/240 (6%) Strand=Plus/Minus Query 10838 TTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTA---TCAAAGCCATCCATCTCAGTC 10894 || || || || ||||||| ||| || || |||| ||||| |||||||| || ||| Sbjct 4534 TTAGTTGCTGCAATGACAATGATACCAGT---GTTACCCTCAAAACCATCCATTTCTGTC 4478 Query 10895 AAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGCATACCA---CCCGCACTG 10951 || || || || | ||| ||||| | ||||||||| | |||| || | || Sbjct 4477 AAAAGCTGGTTAAGGGTCTGTTCTCTTTCATCATTTCCTCC---ACCAATGCCAGTACCT 4421 Query 10952 CGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTC-ACG 11010 | |||| | || || || ||||||||||| | || || || || || ||| || | Sbjct 4420 CTTTGCCTTCCAACAGCATCAATTTCATCCACAAATACAATGCAAGGAGCATTATCTTTG 4361 Query 11011 GGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAA 11070 | | ||| ||| | ||| |||||||| |||||| ||||| |||||||| || ||||| Sbjct 4360 GCCTTCTTGAAA-AGATCACGGACTCTAGAGGCACCAACACCAACAAACATCTCAACAAA 4302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597297956512160