Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hevea_20brasiliensis_20[genbank_20GCA_5F001654055.1_202016-06-01] 7,452 sequences; 1,373,365,927 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq345 618 6e-172 seq43 531 6e-146 seq17 526 3e-144 seq404 508 7e-139 seq875 269 3e-67 seq52 210 3e-49 seq65 100 4e-16 seq1475 87.8 2e-12 seq941 86.0 8e-12 seq1225 84.2 3e-11 >seq345 Length=1218342 Score = 618 bits (684), Expect = 6e-172 Identities = 672/892 (75%), Gaps = 0/892 (0%) Strand=Plus/Plus Query 7529 TCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATG 7588 ||| ||||||| ||||| ||||||||||| ||||||||||| || ||||| |||||||| Sbjct 657170 TCAACAGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATA 657229 Query 7589 CCAAGACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCA 7648 ||||| ||||||||| | | || |||||||| || | ||| ||||||||| |||| Sbjct 657230 CCAAGGTTAGCACGGTTAATAATATCAGCCCAGGTATTAATTACATGACCTTGACTATCA 657289 Query 7649 ATGATGGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGA 7708 | | || |||||||| |||||| | || |||||||| |||| ||||||| ||| | | Sbjct 657290 ACTACAGATTGGTTGAAATTGAAATCATTTAGGTTGAAAACCATAGTGCTAATACCTAAA 657349 Query 7709 GCAGTGAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAG 7768 ||| ||||||| || || || || ||| | | || | |||||| |||| |||| ||| Sbjct 657350 GCAATGAACCAAATACCTACTACAGGCAAAGTAGCTAAGAAGAAATGCAAAAAACGAGAG 657409 Query 7769 TTGTTGAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATG 7828 |||||| | ||| ||||||||||||| || ||||| || || |||||||| ||||| Sbjct 657410 TTGTTGGAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATA 657469 Query 7829 TTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTG 7888 || || || ||||| ||||||||||| | ||||| | || || ||| || ||| Sbjct 657470 TTATAAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTG 657529 Query 7889 GTTTCACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCA 7948 ||||| | | || | ||||||||| | ||||||||||| |||||||| || || || Sbjct 657530 GTTTCCCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCG 657589 Query 7949 CCAAAGACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCT 8008 || || |||||||| ||||| | |||||| || |||||||| |||||||||||||| || Sbjct 657590 CCGAATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCC 657649 Query 8009 TGGAAGACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAAA 8068 ||||| |||| ||| ||||||| ||||||||||| || ||||||||| | ||||| || Sbjct 657650 TGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAG 657709 Query 8069 GAACCTTGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAG 8128 || ||||| | ||||| | | ||| ||||||| || || ||||| ||||| || Sbjct 657710 CTTCCCTGACCAATTGGATAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAA 657769 Query 8129 TATGCTACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACCC 8188 ||||| ||| ||||| || |||||||| | |||| || ||||||||||||||||||| Sbjct 657770 TATGCAACAGCAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTCACGACCC 657829 Query 8189 ATGTATGCATAGATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACCGTTG 8248 ||||| | | ||| | | |||||| | | || || | ||||||| || ||| Sbjct 657830 ATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTG 657889 Query 8249 TAGAGCCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGAGACCAATAGCG 8308 || | ||| ||||||| || || |||||||| || || || || || | ||| ||||| Sbjct 657890 TATAACCATTCATCAACGGATGCCGCTTCCCATATTGGGTAAAAATGCAAACCTATAGCT 657949 Query 8309 TTAGAAGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACATGAGCGAACCAGCG 8368 |||||| ||||| || |||||||| || || ||||| ||||| | || || | || Sbjct 657950 GTAGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGTAGAGATCTAGAA 658009 Query 8369 ACGGGTTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAGCGA 8420 || |||||||| || || ||||| || || ||||| ||||| | ||||| || Sbjct 658010 ACAGGTTCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGAGA 658061 >seq43 Length=3080068 Score = 531 bits (588), Expect = 6e-146 Identities = 575/761 (76%), Gaps = 1/761 (0%) Strand=Plus/Plus Query 7637 CCTTGACCATCAATGATGGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTG 7696 ||||||| ||||| | || |||||||| |||||||| || |||||||| ||||| ||| Sbjct 2030414 CCTTGAC-ATCAACTACAGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTG 2030472 Query 7697 CTAACACCAAGAGCAGTGAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGC 7756 |||| ||| | |||||||||||| || || || || ||||| || || |||||||| || Sbjct 2030473 CTAATACCTAAAGCAGTGAACCAAATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGT 2030532 Query 7757 AGCGAACGGGAGTTGTTGAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGA 7816 | ||||| ||||||||||| ||| ||||||||||||| || ||||| || || ||| Sbjct 2030533 AAAGAACGAGAGTTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGA 2030592 Query 7817 GCAGCAACGATGTTGTAGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGAC 7876 ||||| ||||| || || || ||||| ||||||||||| | ||||| | || || Sbjct 2030593 GCAGCTACGATATTATAAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGAT 2030652 Query 7877 TCAGACTCAGTGGTTTCACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTG 7936 ||| || |||||||| | | || | ||||||||| | ||||||||||| |||||| Sbjct 2030653 TCATTTTCTGTGGTTTCCCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTG 2030712 Query 7937 AACAGAGAACCACCAAAGACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATG 7996 || || || || || || |||||||| ||||| | |||||| || |||||||| |||||| Sbjct 2030713 AATAGGGAGCCGCCGAATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATG 2030772 Query 7997 TTGTGCTCTGCTTGGAAGACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATA 8056 |||||||| || ||||| |||| ||| ||||||| ||||||||||| || ||||||||| Sbjct 2030773 TTGTGCTCAGCCTGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATA 2030832 Query 8057 GCGTCAGAGAAAGAACCTTGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCA 8116 | ||||| || || ||||| | ||||| | | ||| ||||||| || || ||| Sbjct 2030833 CCATCAGAAAAGCTTCCCTGACCAATTGGATAAATCAAGAAAACAGCAGTAGCAGCTGCA 2030892 Query 8117 ACTGGAGCAGAGTATGCTACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCC 8176 || ||||| || ||||| ||| ||||| || |||||||| |||||| || ||||||| Sbjct 2030893 ACAGGAGCTGAATATGCAACAGCAATCCAAGGGCGCATACCCAGACGGAAACTAAGTTCC 2030952 Query 8177 CACTCACGACCCATGTATGCATAGATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAA 8236 ||||||||||||||||| | | ||| | | |||||| || | || || | || Sbjct 2030953 CACTCACGACCCATGTAACAAGCTACACCAAGTAAGAAGTGTAAAACAATTAGCTCATAA 2031012 Query 8237 GGACCACCGTTGTAGAGCCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGG 8296 |||| || || || | ||| ||||||| || || |||||||| || || || || || Sbjct 2031013 GGACTGCCATTATATAACCATTCATCAACGGATGCCGCTTCCCATATTGGGTAAAAATGC 2031072 Query 8297 AGACCAATAGCGTTAGAAGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACATG 8356 | ||| ||||| ||||| ||||| || |||||||| || || ||||| ||||| | Sbjct 2031073 AAACCTATAGCCGCAGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCATAAAGT 2031132 Query 8357 AGCGAACCAGCGACGGGTTCACGGATGCCGTCAATGTCCAC 8397 || || |||| || |||||||| || || ||||| || || Sbjct 2031133 AGAGATCCAGAAACAGGTTCACGAATACCATCAATATCTAC 2031173 >seq17 Length=3754437 Score = 526 bits (582), Expect = 3e-144 Identities = 719/999 (72%), Gaps = 14/999 (1%) Strand=Plus/Plus Query 6284 ACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCCACTGGTGCCATCCAGGCACGT 6343 || || ||||| |||| || ||||||||| || ||||| | |||||||| ||||| Sbjct 3587012 ACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCTTGAGCCGCCATCCAAGCACGA 3587071 Query 6344 AGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTCTCGAACTCTGGATCCTCCGCT 6403 | | |||||| || || || || || || ||||| ||||| || || ||||| || ||| Sbjct 3587072 ATAAATTCATTTAAGAGAATATTTTTAGTGTAGAAAGTCTCAAATTCAGGATCTTCTGCT 3587131 Query 6404 GCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGGTTAAGTGCAAGACCAATAATA 6463 || | || || || ||||| |||||||| || | || || || || ||| | | Sbjct 3587132 GCACGAATTTCCTGAGAAACGAAGTCATAGGCACATAGATTCAGAGCTAGATCGA----- 3587186 Query 6464 CCAATGCTAGAGG-----TCCAAAGACCCATAACAGGAACAAACAGCATAAAGAAATGTA 6518 ||| | | |||| |||| | ||| | || || ||||| | |||||||||||||| Sbjct 3587187 CCACTCCAAGAGCGCTCATCCATAAACCGGTTACTGGTACAAATAACATAAAGAAATGTA 3587246 Query 6519 GCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACCAGAAACGATTAGCCGTGA 6578 |||| | |||||| || || | |||||||| |||||||| || || ||||| |||| Sbjct 3587247 ACCAATGTTTATTGGAAAAAGCTACCCCAAAGATTTGAGACCAAAAGCGGTTAGCGGTGA 3587306 Query 6579 CCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAACGCCTTGAAAGTATTTGATTGTT 6638 |||| ||||| || || || |||| || || | ||| || ||| ||||||| | Sbjct 3587307 CCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAGGCACGGAATGTATTTGCACCAT 3587366 Query 6639 CACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATAGCACAGAGCAATGCTC 6698 ||||||||||||| |||||||| |||||||||||||| |||||||| || |||| || Sbjct 3587367 CACCATCTTCAAATAAAGTATTTTCTACAGTAGCACCATGAATAGCGCATAGCAGAGCAG 3587426 Query 6699 CACCTAAGATACCTGCTACACCCATCATATGAAACGGGTTGAGCGTCCAGTTGTGGAAGC 6758 | || || | || || || |||||||||||||| ||||| ||||||||||| || || | Sbjct 3587427 CGCCCAATACGCCGGCAACTCCCATCATATGAAATGGGTTCAGCGTCCAGTTATGAAACC 3587486 Query 6759 CCTGTAGGAAGAGTAAGAAGCGGAATATCGCTGCAACACCAAACGACGGCGCAAAGAACC 6818 | || | ||||| | ||| || ||||| ||||| |||||||| |||||||| |||| Sbjct 3587487 CTTGGAAAAAGAGGATGAATCGAAATATAGCTGCTACACCAAAACTAGGCGCAAAAAACC 3587546 Query 6819 AACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACACAAAGACAGCAATGGGACCAG 6878 ||| ||||| || | ||||| || || || ||||| ||||| |||||||| ||| ||| Sbjct 3587547 AACCAGACTGGCCTAATGGATAAATCAGGAATACAGAAACAAAAACAGCAATTGGAGCAG 3587606 Query 6879 AAAACGCGATTGCATTGTAGGGACG-AATACCGACTAGA-CGTGCGATCTCAAACTGCCG 6936 | || ||||||||||| || || || ||| | || ||| || || | ||||| || || Sbjct 3587607 AGAATGCGATTGCATTATAAGGTCGCAATTGC-AC-AGATCGAGCAAGTTCAAATTGACG 3587664 Query 6937 AAGCATGAAACCTATAAGGGCAAAGGCTCCGTGGAGCGCCACAAAAGGCCATAGTCCCCC 6996 | ||| |||||||| || |||| || |||||||| || ||||||| ||| | || || Sbjct 3587665 TAACATAAAACCTATTAGTCCAAAAGCACCGTGGAGAGCAACAAAAGTCCACAAACCACC 3587724 Query 6997 AAGTTGGAGCCAGCGGACGAAATCTCCCTGAGCTTCTGGACCCCATAGAAGAAGTAGGGA 7056 | ||| ||| || |||||||| || ||||| |||||||||| | | | || Sbjct 3587725 TAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGACCCCATAATAATAACAAAGA 3587784 Query 7057 ATGTCCGAGAGCGTCAGCAGGAGTTGATACAGCAGCAGTAAGGAAATTACATCCCTCAAG 7116 |||| | | | | ||||||||| || || || || || | ||| || || || || | Sbjct 3587785 ATGTGCTAAACTATTAGCAGGAGTAGAAACTGCGGCGGTTAAGAAGTTGCAGCCTTCCAA 3587844 Query 7117 ATACGAAGAAGCAATCCCGTGAGTGTACCAGCTCGTGACGAAAGTTGTGCCCGTGAGCCA 7176 ||| ||| || | || || || ||||| || || || ||||| || |||| ||| Sbjct 3587845 ATAGGAACTCGCCAATCCATGGGTATACCATGAGGTTACAAAGGTTGTACCTGTGAACCA 3587904 Query 7177 ACCGCCCAGTGCCAGGTAAGCAGTAGGGAACAGAAGAAGACCTGACCAACCAACAAAAAC 7236 ||| || | || | || ||| ||| || || | ||||| |||||||| |||||||| Sbjct 3587905 ACCCCCTACGGCGAAATAGGCACAAGGAAAGAGCAATAGACCGGACCAACCTACAAAAAC 3587964 Query 7237 GAACCTATCACGCTTAAGCCAGTCATCGAGTACATCAAA 7275 ||| | || | | | ||||||||| | | |||||| Sbjct 3587965 GAAACGGTCCCTCCGTAACCAGTCATCCATAATATCAAA 3588003 >seq404 Length=1096556 Score = 508 bits (562), Expect = 7e-139 Identities = 554/733 (76%), Gaps = 2/733 (0%) Strand=Plus/Plus Query 7533 CAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATGCCAA 7592 ||||||| ||||| ||||||||||| ||||||||||| || ||||| |||||||| |||| Sbjct 543770 CAGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAA 543829 Query 7593 GACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCAATGA 7652 | ||||||||| | | || |||||||| || | ||||||||||||| ||||| | Sbjct 543830 GGTTAGCACGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTA 543889 Query 7653 TGGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGAGCAG 7712 || |||||||| |||||||| || |||||||| ||||| ||||||| ||| | ||||| Sbjct 543890 CAGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAG 543949 Query 7713 TGAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAGTTGT 7772 ||| ||| || || || | ||||| || || |||||||| || | ||||| ||||||| Sbjct 543950 TGAGCCAAATACCTACTTCAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAGTTGT 544009 Query 7773 TGAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATGTTGT 7832 |||| ||| ||||||||||||| || ||||| || || |||||||| ||||| || | Sbjct 544010 TGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTAT 544069 Query 7833 AGGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTGGTTT 7892 | || ||||| ||||||||||| | ||||| | || || ||| || ||||||| Sbjct 544070 AAGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTT 544129 Query 7893 CACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCACCAA 7952 | | | || | ||||||||| | ||||||||||| |||||||| || || || || | Sbjct 544130 CCCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGA 544189 Query 7953 AGACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGA 8012 | |||||||| ||||| | |||||| || |||||||| |||||||||||||| || |||| Sbjct 544190 ATACACCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGA 544249 Query 8013 AGACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAAAGAAC 8072 | |||| ||| ||||||| ||||||||||| || ||||||||| | ||||| || | Sbjct 544250 ATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAGCTTC 544309 Query 8073 CTTGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAGTATG 8132 | ||||| | ||||| | | ||| ||||||| || | ||||| || || || |||| Sbjct 544310 CCTGACCAATTGGATAAATCAAGAAAACAGCAGTAGCAGTTGCAACAGGTGCTGAATATG 544369 Query 8133 CTACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACCCATGT 8192 | | | ||||| || |||||||| | |||| || ||||||||||| | | || | Sbjct 544370 CAATAGTAATCCAAGGGCGCATACCCAAACGGAAACTAAGTTCCCACTTA-TATATATAT 544428 Query 8193 ATGCATAGAT-ACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACCGTTGTAG 8251 || ||| || ||| | | |||||| | | || || | ||||||| || ||||| Sbjct 544429 ATATATATATCACCAAGTAAGAAGTGTAGAACAATTAGCTTATAAGGACCGCCATTGTAT 544488 Query 8252 AGCCACTCATCAA 8264 | ||| ||||||| Sbjct 544489 AACCATTCATCAA 544501 >seq875 Length=443518 Score = 269 bits (298), Expect = 3e-67 Identities = 535/783 (68%), Gaps = 18/783 (2%) Strand=Plus/Plus Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322 ||||| || || ||| || || || | ||| |||| || |||||||| || | || Sbjct 379702 AGAGCATTTCCATGTGGTAAAACCTCCTTAGGGAATATAACATTTTCATGAGGCTAATGT 379761 Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382 | ||||||| ||| | | ||||||||| || || || || || || ||||| ||| Sbjct 379762 TGAGTCACCATCCAAGCATGAATACCTTCATTTAAGAGAATATTTTTAGTGTAGAAAGTC 379821 Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442 || || || |||| | |||| | | | | || || ||||| |||||||| || | || Sbjct 379822 TCAAATTCAAGATCTTTCGCTACACGGGTTTCCTGAGAAACGAAGTCATAGGCACGTAGA 379881 Query 6443 TTAAGTGCAAGACCAATAATACCAA---TGCTAGAGGTCCAAAGACCCATAACAGGAACA 6499 || || || |||| | | | || |||| |||| | ||| | || || ||| Sbjct 379882 TTCAGAGCCAGACTGACCACTCTAAGAGTGCTCA---TCCATAAACCAGTTACTGGTACA 379938 Query 6500 AACAGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGAC 6559 || | ||||||||||||| | ||| |||||| |||| | | ||||| || |||||| Sbjct 379939 AATAATATAAAGAAATGTAACTAACATTTATTGGAGAAG-CAACCCCAAAAATTTGAGAC 379997 Query 6560 CAGAAACGATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAACGCC 6619 || ||||| |||| ||||| || ||||| || || || |||| || || | ||| || Sbjct 379998 CAAAAACGGTTAGTGGTGACAATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAAGCA 380057 Query 6620 TTGAAAGTATTTGATTGTTCACCATCTTC-AAACAAAGTATTCTCTACAGTAGCACCGTG 6678 | || ||||||| ||||||||||| ||| |||||||| |||| || |||||| || Sbjct 380058 TATAATGTATTTGCACCATCACCATCTTCAAAAAAAAGTATTTTCTATAGCAGCACCATG 380117 Query 6679 AATAGCACAGAGCAATGCTCCACCTAAGATACCTGCTACACCCATCATATGAAACGGGTT 6738 |||||| || ||||| | |||| || || || | || || ||||||| ||| ||||| Sbjct 380118 AATAGCGCATAGCAAAACAGCACCCAATATGCCAACAACTCCTATCATATAAAATGGGTT 380177 Query 6739 GAGCGTCCAGTTGTGGAAGCCCTGTAGGAAGAGTAAGAAGCGGAATATCGCTGCAACACC 6798 ||| |||| || || || | || | ||||| | ||| | ||||| ||||| ||||| Sbjct 380178 CAGCATCCAATTATGAAACTCTTGGAAAAAGAGGATGAATCAAAATATAGCTGCTACACC 380237 Query 6799 -AAACGACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACA 6857 |||| | ||| ||| ||| ||| ||| || | ||||| | | || ||||| | Sbjct 380238 TAAACTA-GGCATAAAAAACAAACCAAACTAGCCTAATGGATAAGTTAAGAATACAGAAA 380296 Query 6858 CAAAGACAGCAATGGGACCAGAAAACGCGATTGCATTGT-AGGGACGAAT---ACCGACT 6913 |||| ||| | | ||| | | || ||||||||| | ||| | ||| || || | Sbjct 380297 CAAAAACAATAGTTGGAGTAAAGAATTTGATTGCATTATAAGGTAGTAATTGCACAGATT 380356 Query 6914 AGACGTGCGATCTCAAACTGCCGAAGCATGAAACCTATAAGGGCAAAGGCTCCGTGGAGC 6973 | || | ||||| | || | ||| ||||||| || |||| || |||||||| Sbjct 380357 A----AGCAAGTTCAAATTAACGTAACATAAAACCTACTAGTCCAAAAGCACCGTGGAGA 380412 Query 6974 GCCACAAAAGGCCATAGTCCCCCAAGTTGGAGCCAGCGGACGAAATCTCCCTGAGCTTCT 7033 | || |||| ||| | || || | || ||| || |||||||| || ||||| Sbjct 380413 GTAACTAAAGTCCACAAACCACCTAATTAACACCAACGAGTAAAATCTCCTTGTGCTTCA 380472 Query 7034 GGA 7036 ||| Sbjct 380473 GGA 380475 >seq52 Length=2912074 Score = 210 bits (232), Expect = 3e-49 Identities = 305/427 (71%), Gaps = 18/427 (4%) Strand=Plus/Plus Query 6284 ACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCCACTGGTGCCATCCAGGCACGT 6343 || || ||||| |||| || ||||||||| || ||||| | |||||||| ||||| Sbjct 2284220 ACCTCCTCAGGGAATATAAGGTTTTCATGAGGCTGATCTTGAGCCGCCATCCAAGCACGA 2284279 Query 6344 AGACCTTCATTCAATAGGATGTTCTTGGTATAGA-ACGTCTCGAACTCTGGATCCTCCGC 6402 | |||||| || || || || || | |||| | | | | | | ||||| ||||| Sbjct 2284280 ATACCTTCGTTTAAGAGAATATTTATA-TATATATATATATATATATAAGGATCTTCCGC 2284338 Query 6403 TGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGGTTAAGTGCAAGACCAATAAT 6462 ||| | ||| || || ||||| |||||||| || | || || || || ||| | Sbjct 2284339 TGCACGGATTTCCTGAGAAACGAAGTCATAGGCACGTAGATTCAGAGCCAGATTGA---- 2284394 Query 6463 ACCAATGCTAGAGG-----TCCAAAGACCCATAACAGGAACAAACAGCATAAAGAAATGT 6517 ||| | | |||| |||| | ||| | || || ||||| | ||||||||||||| Sbjct 2284395 -CCACTCCAAGAGCGCTCATCCATAAACCAGTTACTGGTACAAATAACATAAAGAAATGT 2284453 Query 6518 AGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACCAGAAACGATTAGCCGTG 6577 | |||||| |||||| || || | |||||||| |||||||| || || ||||| ||| Sbjct 2284454 AACCAACGTTTATTGGAAAAAGCAACCCCAAAGATTTGAGACCAAAAGCGGTTAGCGGTG 2284513 Query 6578 ACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAACGCCTTGAAAGTATTTGATTGT 6637 ||||| ||||| || || || |||| || || | ||| || ||| ||||||| Sbjct 2284514 ACCATTGAATAAGTTTCTTCAGCTTGAGTTGGGTTAAAGGCACGGAATGTATTTGCACCA 2284573 Query 6638 TCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATAGC-----ACAGAGCA 6692 |||||||||||||| |||||||| |||||||||||||| |||| ||| ||||||| Sbjct 2284574 TCACCATCTTCAAATAAAGTATTTTCTACAGTAGCACCATGAAAAGCGGTTAGCAGAGCA 2284633 Query 6693 ATGCTCC 6699 || |||| Sbjct 2284634 AT-CTCC 2284639 >seq65 Length=2714061 Score = 100 bits (110), Expect = 4e-16 Identities = 163/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 10209 AAGTTCATCCTCTTTGTCAATCTCAACCACACAATCGCTCGTGGGATAAGAAACACAGGT 10268 ||| || ||||| |||| |||| | ||| ||| | ||||||| ||||| || Sbjct 204440 AAGCTCCTCCTCCTTGTGTGTCTCGATGACAATATCAGACTGAGGATAAGCGACACAAGT 204499 Query 10269 CAGAAGGAAACCAGCATCGATCTGGTCATCATCAAGGAACGATTGATCGCTTTGATCTAC 10328 |||| |||||||||| ||||||||||| |||||||| |||| ||||| || Sbjct 204500 GAGAACCCAACCAGCATCAATCTGGTCATCGTCAAGGAAGCTCCCATCGGACTGATCCAC 204559 Query 10329 CGTACCCGAGATGAGTTTGCCTGCACAACTCGAACAGGCACCAGCTCGGCACGAGTAGTT 10388 || || | | | ||| || |||||| || || | |||||| | ||| ||||| Sbjct 204560 AGTTCCTGCTACAACTTTCCCAGCACAAGAAGAGCAAGAACCAGCCCTGCATGAGTATGG 204619 Query 10389 GAGGTCAATGCCTGCTTCTTCAGCAGCATCCAGAATGTACTGATCGTCAGCACAC 10443 ||||||| || ||||| ||| |||||| ||||| || ||| |||| |||| Sbjct 204620 CAGGTCAACACCAGCTTCCTCAAAAGCATCAAGAATATAGACATCATCAGGACAC 204674 >seq1475 Length=110218 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 7654 GGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGAGCAGT 7713 ||| | |||||| | ||||| || |||||||| ||||| ||||||| ||| | |||| | Sbjct 47255 GGATTAGTTGAAATCAAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCAAT 47196 Query 7714 GAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAGTTGTT 7773 |||||| || || || | ||||| || | | |||| || || | |||||||| Sbjct 47195 GAACCAAATACCTACTATAGGCCAAGCAGATATAGAGAAATGTGAAGACAGAGAGTTGTT 47136 Query 7774 GAACGAAGCGTATTGGAAGATCA 7796 ||| ||| ||||||||||||| Sbjct 47135 GAAACTAGCATATTGGAAGATCA 47113 >seq941 Length=398018 Score = 86.0 bits (94), Expect = 8e-12 Identities = 165/242 (68%), Gaps = 1/242 (0%) Strand=Plus/Plus Query 10204 CAGTAAAGTTCATCCTCTTTGTCAATCTCAACCACACAATCGCTCGTGGGATAAGAAACA 10263 |||||| | ||| | || |||| ||||||| ||| ||| | ||| ||| |||| Sbjct 368531 CAGTAA-GCTCAGCTTCCTTGTGTGTCTCAACGACAACATCAGACTGAGGAAAAGCAACA 368589 Query 10264 CAGGTCAGAAGGAAACCAGCATCGATCTGGTCATCATCAAGGAACGATTGATCGCTTTGA 10323 || || |||| ||||||| || ||||||||||| |||||||| |||| || Sbjct 368590 CAAGTGAGAACCCAACCAGCCTCTATCTGGTCATCGTCAAGGAAGCTCCCATCGGACTGG 368649 Query 10324 TCTACCGTACCCGAGATGAGTTTGCCTGCACAACTCGAACAGGCACCAGCTCGGCACGAG 10383 |||| || || | | | ||| |||||||| || || | |||||| | ||| ||| Sbjct 368650 TCTAAGGTTCCTGCTACAATTTTCCCTGCACAGGAAGAGCAAGAACCAGCCCTGCATGAG 368709 Query 10384 TAGTTGAGGTCAATGCCTGCTTCTTCAGCAGCATCCAGAATGTACTGATCGTCAGCACAC 10443 || || |||| || ||||| ||| ||| || ||||| || ||| |||| ||| Sbjct 368710 TATGGCAGATCAACACCAGCTTCCTCAAAAGCGTCAAGAATATAAACATCATCAGGGCAC 368769 Query 10444 TC 10445 || Sbjct 368770 TC 368771 >seq1225 Length=211548 Score = 84.2 bits (92), Expect = 3e-11 Identities = 111/154 (72%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 7688 GCCATGGTGCTAACACCAAGAGCAGTGAACCAGATGCCAACAACTGGCCATGCTGCGAGG 7747 ||||||||||||| | | | ||||||||| | || || || | |||| || || | | Sbjct 11017 GCCATGGTGCTAATAACTAAAGCAGTGAAATAAATACCCACTATATGCCAAGCAGCTAAG 11076 Query 7748 AAGAAGTGCAGCGAACGGGAGTTGTTGAACGAAGCGTATTGGAAGATCAGACGACCAAAG 7807 ||||| | | ||| | ||||||||||| ||| |||| |||||||| || ||||| Sbjct 11077 AAGAAATATAAAGAATGAGAGTTGTTGAAACTAGCATATTAGAAGATCAATCGGCCAAAA 11136 Query 7808 TATCCGTGAGCAGCAACGATGTTGTAGGTCTCTT 7841 || | || ||||| || || || || || |||| Sbjct 11137 TAACTATGTGCAGCTACAATATTATAAGTTTCTT 11170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622066849074880