Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hevea_20brasiliensis_20[genbank_20GCA_5F001654055.1_202016-06-01] 7,452 sequences; 1,373,365,927 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq262 87.8 2e-12 >seq262 Length=1443145 Score = 87.8 bits (96), Expect = 2e-12 Identities = 230/344 (67%), Gaps = 18/344 (5%) Strand=Plus/Minus Query 12753 TTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTA---TCGAAGCCATCCATCTCAGTC 12809 || || || || ||||||| ||| || || |||| || || |||||||| || ||| Sbjct 905627 TTAGTAGCTGCAATGACAATGATACCAGT---GTTACCCTCAAAACCATCCATTTCTGTC 905571 Query 12810 AAGAGTTGATTGATGGTTTGTTCACGTTCATCATTCGCGGGCATACCA---CCCGCACTG 12866 || || || || | ||| ||||| | ||||||||| | |||| || | || Sbjct 905570 AAAAGCTGGTTAAGGGTCTGTTCTCTTTCATCATTTCCTCC---ACCAATGCCGGTACCT 905514 Query 12867 CGTTGCTTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGG 12926 | |||| | || || || |||||||| || | || || || || || |||||| | Sbjct 905513 CTTTGCCTTCCAACAGCATCAATTTCATCCACAAATACAATGCAAGGAGCATTTTCTTTG 905454 Query 12927 GCAACTTCA--AAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAA 12984 || |||| |||| ||| || || || |||||| ||||| ||||||||||| |||| Sbjct 905453 GC--CTTCTTGAAGAGATCACGGACCCTAGAGGCACCAACACCAACAAACATCTCAACAA 905396 Query 12985 AATTGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCG 13043 | | | | | | || | || || || || | |||||| || ||||| ||| Sbjct 905395 ACTCAGAACCAG-ATATGGAGAAAAATGGAACACCAGCTTCACCAGCAATGGCCTTGGCT 905337 Query 13044 AGGAGGGTCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACC 13087 || || ||||| || || ||||| || | |||||| |||| Sbjct 905336 AGAAGAGTCTTTCCGGTTCCTGGAGGACCAACAAGAAGGACACC 905293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613450051804320