Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hevea_20brasiliensis_20[genbank_20GCA_5F001654055.1_202016-06-01] 7,452 sequences; 1,373,365,927 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq345 506 2e-138 seq43 426 2e-114 seq404 410 1e-109 seq17 340 2e-88 seq875 104 3e-17 seq1259 102 1e-16 seq578 100 3e-16 seq52 96.9 4e-15 >seq345 Length=1218342 Score = 506 bits (560), Expect = 2e-138 Identities = 642/883 (73%), Gaps = 0/883 (0%) Strand=Plus/Minus Query 171925 TTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTC 171984 |||||||| || ||||| || ||||| || || || | ||||| ||| | | ||| | Sbjct 658056 TTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTAGATCTCTA 657997 Query 171985 TTATATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTC 172044 | ||||| ||||| || || |||||||| || |||| | || | || |||||| | Sbjct 657996 CTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACTTCTACAGCTATAGGTTTG 657937 Query 172045 CACTTCTACCCTATCTGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCT 172104 || || ||||| || |||||||| ||| |||| ||||||||||| |||||||| |||||| Sbjct 657936 CATTTTTACCCAATATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCT 657877 Query 172105 TATCAGTTGGTAATCTTCCACTTCCTTATCGGTATCTCAGCATACATGGGAAGACAGTGG 172164 ||| || | | | | |||||| | | ||| | | |||||||| | ||||| Sbjct 657876 TATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGG 657817 Query 172165 GAACTATCATACAGATTAGGTATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTA 172224 ||||| | | | || |||||| | || ||||| ||| ||||||||||| ||||| Sbjct 657816 GAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTT 657757 Query 172225 TCAGCAGCATTTGCTGTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGT 172284 |||| || |||||| ||| | | |||||| | |||||||| || ||||||||| Sbjct 657756 GCAGCTGCTACTGCTGTTTTCTTGATTTATCCAATTGGTCAGGGAAGCTTTTCTGATGGT 657697 Query 172285 ATGCCACTAGGTATCTCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAAC 172344 ||||| ||||| ||||| ||||| |||||||||||| | || ||||| || ||||| ||| Sbjct 657696 ATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAAC 657637 Query 172345 ATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTC 172404 || || ||||| || || |||||| ||| ||||| || | || || || || ||||| Sbjct 657636 ATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTC 657577 Query 172405 TCAGCAATGCACGGTTCTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAA 172464 || ||||| ||||| || || || ||| | | ||||| || || || ||| ||| Sbjct 657576 AGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAA 657517 Query 172465 TCACAGAACTACGGATACAAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCA 172524 || || | || |||| ||||| ||||| |||||||| || || || ||||| || Sbjct 657516 TCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCT 657457 Query 172525 CACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTT 172584 || ||||| ||||| || | |||||||| |||||| || ||||||||| | | | Sbjct 657456 CATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTCCAACAACTCTCGTTTTTTG 657397 Query 172585 CACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGT 172644 || |||||| |||| ||| ||||| ||| || | ||||| | || | ||||| | Sbjct 657396 CATTTCTTCTTAGCTACTTTGCCTGTAGTAGGTATTTGGTTCATTGCTTTAGGTATTAGC 657337 Query 172645 ACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGT 172704 || |||| |||||||| || | |||||| ||||||||||| || || ||| | | ||| Sbjct 657336 ACTATGGTTTTCAACCTAAATGATTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGT 657277 Query 172705 AAGATTGTTCCTACATGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATG 172764 | | || ||| |||| ||| || ||||| | || ||||| ||||||||||||||| Sbjct 657276 CATGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATG 657217 Query 172765 CATGAAAGAAATGCACACAACTTCCCATTAGACCTTGCTTCTG 172807 |||||| | ||||| || |||||||| ||||||| ||| ||| Sbjct 657216 CATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTGCTG 657174 >seq43 Length=3080068 Score = 426 bits (472), Expect = 2e-114 Identities = 547/754 (73%), Gaps = 0/754 (0%) Strand=Plus/Minus Query 171943 GTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAACATC 172002 || ||||| || || || | ||||| ||| | || ||| | | ||||| ||||| || Sbjct 2031173 GTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATT 2031114 Query 172003 ATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATCTGG 172062 || |||||||| || |||| | || || |||||| | || || ||||| || ||| Sbjct 2031113 ATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTACCCAATATGG 2031054 Query 172063 GAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAATCTTC 172122 ||||| ||| |||| ||||||||||| || ||||| |||||||| || | | | || Sbjct 2031053 GAAGCGGCATCCGTTGATGAATGGTTATATAATGGCAGTCCTTATGAGCTAATTGTTTTA 2030994 Query 172123 CACTTCCTTATCGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAGATTA 172182 |||||| | | ||| | | |||||||| | |||||||||| | | | | Sbjct 2030993 CACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTG 2030934 Query 172183 GGTATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCTGTG 172242 |||||| | || ||||| ||| ||||||||||| ||||| |||| || |||||| Sbjct 2030933 GGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTT 2030874 Query 172243 TTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCTCA 172302 ||| | | |||||| | |||||||| || |||||||||||||| ||||| ||||| Sbjct 2030873 TTCTTGATTTATCCAATTGGTCAGGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCT 2030814 Query 172303 GGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCTTTC 172362 ||||| |||||||||||| | || ||||| || ||||| ||||| || ||||| || || Sbjct 2030813 GGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTT 2030754 Query 172363 CACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGTTCT 172422 |||||| ||| ||||| || | || || || || ||||| || ||||| ||||| Sbjct 2030753 CACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCC 2030694 Query 172423 TTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGGATAC 172482 || || || ||| | | ||||| || || || ||| ||||| || | || ||| Sbjct 2030693 TTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTAC 2030634 Query 172483 AAGTTCGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGTCGT 172542 | ||||| ||||| |||||||| || || || ||||| || || ||||| ||||| || Sbjct 2030633 AGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGA 2030574 Query 172543 CTTATCTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTT 172602 | |||||||| |||||| |||||||||||| | | | || ||||||||||| | | Sbjct 2030573 TTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACATTTCTTCCTAGCTGCT 2030514 Query 172603 TTCCCTGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTT 172662 | ||||| ||| || | ||||| || || | ||||| | || ||||| |||||||| Sbjct 2030513 TGGCCTGTAGTAGGTATTTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTA 2030454 Query 172663 AACGGTTTCAACTTCAACCAATCAGTTGTAGATG 172696 || |||||||| ||||||||||| || || |||| Sbjct 2030453 AATGGTTTCAATTTCAACCAATCTGTAGTTGATG 2030420 >seq404 Length=1096556 Score = 410 bits (454), Expect = 1e-109 Identities = 531/731 (73%), Gaps = 2/731 (0%) Strand=Plus/Minus Query 172078 GATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAATCTTCCACTTCCTTATCGGT 172137 ||||||||||| |||||||| ||||||||| || | | | | |||||| | | ||| Sbjct 544499 GATGAATGGTTATACAATGGCGGTCCTTATAAGCTAATTGTTCTACACTTCTTACTTGGT 544440 Query 172138 -ATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAGATTAGGTATGAGACCATG 172196 || | ||| || | | |||||||||| | | | || |||||| | || || Sbjct 544439 GATATATATATATATATATATA-AGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTG 544381 Query 172197 GATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCTGTGTTCCTTGTGTATCC 172256 ||| | | ||||||||||||||||| || | || |||||| ||| | | ||||| Sbjct 544380 GATTACTATTGCATATTCAGCACCTGTTGCAACTGCTACTGCTGTTTTCTTGATTTATCC 544321 Query 172257 ATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTACGTTCAACTT 172316 | | |||||||| || |||||||||||||| ||||| ||||| ||||| |||||||| Sbjct 544320 AATTGGTCAGGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTT 544261 Query 172317 TATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCTTTCCACATGGCAGGAGT 172376 |||| | || ||||| || ||||| ||||| || ||||| || || |||||| ||| || Sbjct 544260 TATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGT 544201 Query 172377 AGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGTTCTTTAGTTACATCTTC 172436 ||| || | || || || || ||||| || ||||| ||||| || || || ||| Sbjct 544200 AGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAG 544141 Query 172437 TCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGGATACAAGTTCGGACAAGA 172496 | | ||||| || || || ||| ||||| || | || |||| ||||| ||||| Sbjct 544140 TTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGA 544081 Query 172497 AGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTA 172556 |||||||| || || || ||||| || || ||||| ||||| || | |||||||| || Sbjct 544080 GGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATA 544021 Query 172557 TGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTTTTCCCTGTTGTATG 172616 |||| |||||||||||| | | | || ||||||||||| | || |||| ||| | Sbjct 544020 TGCTAGTTTCAACAACTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGAAGTAGG 543961 Query 172617 TGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACGGTTTCAACTT 172676 | | ||| | || || | ||||| | || ||||| |||||||| || |||||||| || Sbjct 543960 TATTTGGCTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTT 543901 Query 172677 CAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCTACATGGGGTGACGTTCTTAA 172736 ||||||||| || || ||| | | ||| | || ||| |||| ||| || |||| Sbjct 543900 CAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAA 543841 Query 172737 CAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCACACAACTTCCCATTAGA 172796 | | || ||||| ||||||||||||||||||||| | ||||| || |||||||| |||| Sbjct 543840 CCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGA 543781 Query 172797 CCTTGCTTCTG 172807 ||| ||| ||| Sbjct 543780 CCTAGCTGCTG 543770 >seq17 Length=3754437 Score = 340 bits (376), Expect = 2e-88 Identities = 687/1021 (67%), Gaps = 25/1021 (2%) Strand=Plus/Minus Query 172951 TTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 173010 |||||| || | || ||||||||| ||| || |||||||| || | || ||||| ||| Sbjct 3588003 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGT 3587944 Query 173011 CTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACTACCTTC 173070 || || || | |||||||| || | | | || ||||||||| ||| || ||||| Sbjct 3587943 CTATTGCTCTTTCCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTCACAGGTACAACCTTT 3587884 Query 173071 GTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAACTTTTTA 173130 || || ||||||||||| ||||| | || ||| ||| | ||||| ||||| ||| Sbjct 3587883 GTAACCTCATGGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGCTGCAACTTCTTA 3587824 Query 173131 ACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTTTGGGGA 173190 || || ||||| || || |||| | | | ||| | | | || | ||||| Sbjct 3587823 ACCGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTGTTATTATTATGGGGT 3587764 Query 173191 CCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAACTTTGTA 173250 |||||||||||||| || ||||||| ||| | || || | |||| ||||| Sbjct 3587763 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTTTGTGGACTTTTGTT 3587704 Query 173251 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATCGCAGGA 173310 || | || || | |||||||| |||||||| ||| | ||||| ||||| | || || Sbjct 3587703 GCTCTCCACGGTGCTTTTGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 3587644 Query 173311 CTTGTAGGCA--TCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCTTCA 173368 ||| ||| | ||||||| || ||| |||||||||||||| || || || || Sbjct 3587643 TCTGT--GCAATTGCGACCTTATAATGCAATCGCATTCTCTGCTCCAATTGCTGTTTTTG 3587586 Query 173369 CTAGCATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTCATTCG 173428 | | || | || || ||| |||| ||| ||||||| || || ||| || | Sbjct 3587585 TTTCTGTATTCCTGATTTATCCATTAGGCCAGTCTGGTTGGTTTTTTGCGCCTAGTTTTG 3587526 Query 173429 GTGTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATTGA 173488 |||| ||||| || ||||| | ||| | || | ||||| || || ||| || ||| Sbjct 3587525 GTGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAACTGGACGCTGA 3587466 Query 173489 ATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCATTC 173548 | |||||||| |||||||| ||||| || || | || | || | ||||| || |||| Sbjct 3587465 ACCCATTTCATATGATGGGAGTTGCCGGCGTATTGGGCGCTGCTCTGCTATGCGCTATTC 3587406 Query 173549 ATGGTGCAACAGTGCAGAACACATTGTATGAAGACACATCACAATATACTGAAGGTAAGA 173608 ||||||| || || | || || || | ||||| || ||| ||| Sbjct 3587405 ATGGTGCTACTGTAGAAAATACTTTATTTGAAG------------ATGGTGATGGT---- 3587362 Query 173609 TTCAATCCACAACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTATAGTATGA 173668 | | || ||| | || ||| | || || || | |||||||||||| ||| Sbjct 3587361 -----GCAAATACATTCCGTGCCTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGG 3587307 Query 173669 TTACAGCGAACAGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAGATTTT 173728 | || || ||| | || ||||| || || ||||| | || ||||| || ||| | | Sbjct 3587306 TCACCGCTAACCGCTTTTGGTCTCAAATCTTTGGGGTAGCTTTTTCCAATAAACATTGGT 3587247 Query 173729 TACACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGGTATCG 173788 |||| ||| | ||||| || ||||| || | ||| | |||| | | || | | Sbjct 3587246 TACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGCGCTCTTGGAGTGG 3587187 Query 173789 TAGGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAG 173848 | | ||| || || || || | || || ||||| || ||||| || || | ||||||| Sbjct 3587186 TCGATCTAGCTCTGAATCTATGTGCCTATGACTTCGTTTCTCAGGAAATTCGTGCAGCAG 3587127 Query 173849 AAGATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGAG 173908 ||||||| || || ||||||||||||||||| ||||| || | |||||| ||| | | Sbjct 3587126 AAGATCCTGAATTTGAGACTTTCTACACTAAAAATATTCTCTTAAATGAATTTATTCGTG 3587067 Query 173909 CATGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGTGTTAC 173968 | |||||| | || |||||| || ||||| ||| | |||| || || || || ||| Sbjct 3587066 CTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTAC 3587007 Query 173969 C 173969 | Sbjct 3587006 C 3587006 >seq875 Length=443518 Score = 104 bits (114), Expect = 3e-17 Identities = 242/361 (67%), Gaps = 3/361 (1%) Strand=Plus/Minus Query 173629 GCATTTGATCCTACACAGGAAGAAGAAACTTATAGTATGATTACAGCGAACAGATTCTGG 173688 || ||| | || || || | |||||||||||| || | || | ||| | || ||| Sbjct 380056 GCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATTGTCACCACTAACCGTTTTTGG 379997 Query 173689 TCACAGATATTTGGTATCGCATTTTCAAACAAAAGATTTTTACACTTCCTCATGTTGTTC 173748 || || || ||||| | || || || || ||| | | ||||| ||| | || || || Sbjct 379996 TCTCAAATTTTTGGGGTTGC-TTCTCCAATAAATGTTAGTTACATTTCTTTATATTATTT 379938 Query 173749 GTACCTGTCATGGGTATGTGGAC-ATCATCCATAGGTATCGTAGGTCTTGCACTTAACCT 173807 ||||| || | ||| | |||| | || | ||| | || |||| || || || || Sbjct 379937 GTACCAGTAACTGGTTTATGGATGAGCACTCTTAGAG-TGGTCAGTCTGGCTCTGAATCT 379879 Query 173808 TAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAAGATCCAGAGTTCGAGAC 173867 | || || ||||| || ||||| || | | | ||| |||||| || || ||||| Sbjct 379878 ACGTGCCTATGACTTCGTTTCTCAGGAAACCCGTGTAGCGAAAGATCTTGAATTTGAGAC 379819 Query 173868 TTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGAGCATGGATGTCATCTGTAGA 173927 |||||||||||| ||||| || | ||||||||||| || |||||| || | | Sbjct 379818 TTTCTACACTAAAAATATTCTCTTAAATGAAGGTATTCATGCTTGGATGGTGACTCAACA 379759 Query 173928 TCAACCACATGAGAACTTCGTATTTCCAGAAGAAGTGTTACCAAGAGGTAACGCACTTTA 173987 | | || ||||| || | |||| || | || || |||||| || || || ||||| Sbjct 379758 TTAGCCTCATGAAAATGTTATATTCCCTAAGGAGGTTTTACCACATGGAAATGCTCTTTA 379699 Query 173988 A 173988 | Sbjct 379698 A 379698 >seq1259 Length=190124 Score = 102 bits (112), Expect = 1e-16 Identities = 148/207 (71%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502 || ||||||||| |||| |||||||| |||||||||||||| |||||||| || || || Sbjct 46153 CAGAGGTTTGGTGTTCCCATGGGATATGGAGGTCCTCATGCCGCATTCTTGGCTACCTCA 46094 Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAG--GTCAGTCAGTAGATAGCGAAG 158560 | |||| ||||| ||| ||||| |||||| | | || ||| || ||| | Sbjct 46093 CAAGAGTACAAGAGGTTGATGCCTGGAAGAATTATTGGTGTTAGT--GTTGATTCTTCTG 46036 Query 158561 GTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAG 158620 | || || | | || | || || || ||||||||||| | || ||||| | Sbjct 46035 GGAAGCCTGCTCTGCGTATGGCGATGCAAACCAGGGAGCAGCATATTCGCAGGGACAAGG 45976 Query 158621 CAACCAGTAACATCTGCACAGCACAAG 158647 | ||||||||||||||||| || |||| Sbjct 45975 CTACCAGTAACATCTGCACTGCTCAAG 45949 Score = 100 bits (110), Expect = 3e-16 Identities = 121/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 157939 GAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 157998 |||||||| |||||||||| ||||| || || |||||||||||||||||||| || Sbjct 46654 GAGAATCCGGCTTGGTACACACAATACACACCTTACCAAGCTGAGATATCTCAGGGGAGG 46595 Query 157999 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCA 158058 ||||| | || | ||||| ||||| | || || || ||||| ||| | || || || Sbjct 46594 TTGGAGTCCTTGCTTAATTATCAAACCATGATTACGGATCTCACTGGATTGCCCATGTCA 46535 Query 158059 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 || || || | | ||||||| ||||| || || || || ||| Sbjct 46534 AATGCTTCATTGCTCGATGAAGGGACTGCTGCTGCTGAGGCTATG 46490 Score = 91.5 bits (100), Expect = 2e-13 Identities = 107/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 159664 CAGGTAGGTCTAGCAAAACCATGTGACTAT-GGTGCAGATGTATGTCATCTAAACTTACA 159722 ||||| ||||| ||| ||| || ||| || || || || || ||||| || | || Sbjct 42771 CAGGTGGGTCTGACAAGTCCAGGTTT-TATCGGAGCTGACGTCTGCCATCTCAATCTCCA 42713 Query 159723 TAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGC 159782 ||| ||||| || ||||| ||||||||||| ||||||||| | |||||||||||||| Sbjct 42712 TAAAACATTTTGCATTCCTCATGGAGGTGGTGGTCCTGGCATGGGTCCTATTGGTGTGAA 42653 Query 159783 AAAACATCTCACACCATTTGTA 159804 ||||| | |||||||| || Sbjct 42652 GAAACACTTGGCACCATTTCTA 42631 >seq578 Length=788646 Score = 100 bits (110), Expect = 3e-16 Identities = 121/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 157939 GAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 157998 |||||||| |||||||||| ||||| || || |||||||||||||||||||| || Sbjct 474475 GAGAATCCGGCTTGGTACACACAGTACACGCCTTACCAAGCTGAGATATCTCAGGGGAGG 474416 Query 157999 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCA 158058 ||||| | || | ||||| ||||| | || | || ||||| ||| | || || || Sbjct 474415 TTGGAGTCCTTGCTTAATTATCAAACCATGATTGCGGATCTCACTGGATTGCCCATGTCA 474356 Query 158059 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 || || || || | ||||||| ||||| || || || || ||| Sbjct 474355 AATGCTTCACTGCTTGATGAAGGGACTGCTGCTGCTGAGGCCATG 474311 Score = 95.1 bits (104), Expect = 1e-14 Identities = 88/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 159693 TGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGG 159752 ||| || ||||| || ||||| || | ||||| ||||| || ||||||||||||||||| Sbjct 470385 TGGAGCTGATGTTTGCCATCTCAATCTCCATAAAACATTTTGCATTCCACATGGAGGTGG 470326 Query 159753 AGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACATCTCACACCATTTGTA 159804 || |||||| | |||||||||||||| ||||| | |||||||| || Sbjct 470325 TGGCCCTGGCATGGGTCCTATTGGTGTGAAGAAACACTTGGCACCATTTCTA 470274 >seq52 Length=2912074 Score = 96.9 bits (106), Expect = 4e-15 Identities = 239/360 (66%), Gaps = 2/360 (1%) Strand=Plus/Minus Query 173620 ACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTATAGTATGATTACAGCGAAC 173679 || ||| | || ||| | || || || | |||||||||||| ||| | || || ||| Sbjct 2284563 ACATTCCGTGCCTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAAC 2284504 Query 173680 AGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAGATTTTTACACTTCCTC 173739 | || ||||| || || ||||| | || ||||| || ||| | | ||||| ||| | Sbjct 2284503 CGCTTTTGGTCTCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTT 2284444 Query 173740 ATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGGTATCGTAGGTCTTGCA 173799 ||||| || ||||| || | ||| | |||| | | || | || ||| || Sbjct 2284443 ATGTTATTTGTACCAGTAACTGGTTTATGGATGAGCGCTCTTGGAGTGGTCAATCTGGCT 2284384 Query 173800 CTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAAGATCCAGAG 173859 || || || | || || ||||| || ||||| || || | ||||| |||||||| | Sbjct 2284383 CTGAATCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTTAT 2284324 Query 173860 TTCGAGACTTTCTACA-CTAAGAATATACTTCTTAATGAAGGTATGAGAGCATGGATGTC 173918 | | | | | || | || ||||| || | || |||||||| | || |||||| | Sbjct 2284323 ATATATA-TATATATATATATAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGC 2284265 Query 173919 ATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGTGTTACCAAGAGGTAA 173978 || |||||| || ||||| ||| | |||| || || || || ||||| | || || Sbjct 2284264 GGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAA 2284205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587996423030720