Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hevea_20brasiliensis_20[genbank_20GCA_5F001654055.1_202016-06-01] 7,452 sequences; 1,373,365,927 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq345 545 3e-150 seq17 538 4e-148 seq43 464 7e-126 seq404 408 5e-109 seq875 260 2e-64 seq52 212 7e-50 >seq345 Length=1218342 Score = 545 bits (604), Expect = 3e-150 Identities = 659/905 (73%), Gaps = 1/905 (0%) Strand=Plus/Minus Query 167176 TCTGT-TTCATCATCGCCTTCGTCGGTGCTCCTCCTGTGGACATCGATGGTATCCGCGAA 167234 ||||| || || ||| | ||| | | ||| ||||| || || || |||||||| || ||| Sbjct 658074 TCTGTATTTATTATCTCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAA 658015 Query 167235 CCAGTTGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCTTCT 167294 || ||| || | || || | ||||| ||||| || || |||||||| || ||||| || Sbjct 658014 CCTGTTTCTAGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACT 657955 Query 167295 TCTAATGCTATTGGTCTTCACTTCTATCCCATCTGGGAAGCAGCAACCCTCGACGAGTGG 167354 |||| ||||| ||| | || || || || || |||||||| ||| || | || || ||| Sbjct 657954 TCTACAGCTATAGGTTTGCATTTTTACCCAATATGGGAAGCGGCATCCGTTGATGAATGG 657895 Query 167355 TTGTACAATGGTGGTCCTTTCCAACTCGTAGTTTTCCACTTCCTGATTGGCATCTATGCC 167414 || |||||||| ||||||| | || | ||| | |||||| | |||| | | Sbjct 657894 TTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGT 657835 Query 167415 TATATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCCTGGATCTGTGTT 167474 || |||||||||||||||||||| || |||| | |||||||| || ||||| |||| Sbjct 657834 TACATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGATTGCTGTT 657775 Query 167475 GCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAA 167534 ||||| || ||||| || || || || ||||||| ||| | | ||||| | ||||| Sbjct 657774 GCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTATCCAATTGGTCAG 657715 Query 167535 GGTTCTTTCTCTGACGCGATGCCTCTTGGTATCTCTGGTACATTCAACTACATGCTTGTC 167594 || || ||||| | |||||||| || ||||||||||| ||||||| ||| |||| Sbjct 657714 GGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTA 657655 Query 167595 TTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGCGTA 167654 ||||| || |||||||||||||| |||||||| || || ||| | ||||| ||||| ||| Sbjct 657654 TTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTA 657595 Query 167655 TTCGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACCTCTTCGCTGGTTCGT 167714 |||||||| || || |||||||| ||||| ||||| |||| |||||| || | | Sbjct 657594 TTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGG 657535 Query 167715 GAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAGGAAGAAGAGACG 167774 |||||||| |||| ||| || || | ||||||| |||||||| || ||||| || Sbjct 657534 GAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACT 657475 Query 167775 TATAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCATCCTTC 167834 ||||| ||||| |||||||||||||| || || || ||||||||||||| || | | Sbjct 657474 TATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTCC 657415 Query 167835 AACAACTCCCGCTCGCTGCACTTCTTCTTGGCAGCATGGCCTGTTGTTGGTATCTGGTNN 167894 |||||||| || | |||| |||||||| || | | |||||| || ||||| |||| Sbjct 657414 AACAACTCTCGTTTTTTGCATTTCTTCTTAGCTACTTTGCCTGTAGTAGGTATTTGGTTC 657355 Query 167895 NNNNNNNNNNNNNNNNNNNNNNNNNNATTCAACCTGAACGGTTTCAACTTCAACCAGTCT 167954 |||||||| || | |||||| |||||||| ||| Sbjct 657354 ATTGCTTTAGGTATTAGCACTATGGTTTTCAACCTAAATGATTTCAATTTCAACCAATCT 657295 Query 167955 ATCCTTGATAGTTCTGGTAAGGTTCTGCCTACTTGGGCAGACGTGCTCAACCGTGCTGGT 168014 | |||||||| ||| | || | ||| ||||| || | | ||||||||| Sbjct 657294 GTAGTTGATAGTCAAGGTCATGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAAC 657235 Query 168015 CTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTTGCTGCT 168074 || ||||||||||||||||| || ||||||||||| ||||||||||| ||||| |||||| Sbjct 657234 CTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTGCT 657175 Query 168075 GCTGA 168079 | ||| Sbjct 657174 GTTGA 657170 >seq17 Length=3754437 Score = 538 bits (596), Expect = 4e-148 Identities = 713/987 (72%), Gaps = 2/987 (0%) Strand=Plus/Minus Query 168495 GATGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 168554 ||||||||| | |||| |||||||||||||| |||||||| || || | || ||| Sbjct 3587991 GATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGTCTATTGCTCTTT 3587932 Query 168555 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTGCTTTCGTCACGAGTTGG 168614 || ||| ||| | || | || |||||| | || || || | || || || ||| Sbjct 3587931 CCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTCACAGGTACAACCTTTGTAACCTCATGG 3587872 Query 168615 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTTCTTACTGCGGCAGTT 168674 ||||| || || ||||| ||||||||| |||| ||| ||||| | || || |||||| Sbjct 3587871 TATACCCATGGATTGGCGAGTTCCTATTTGGAAGGCTGCAACTTCTTAACCGCCGCAGTT 3587812 Query 168675 AGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCACAA 168734 |||||| || || | | | |||||| | | | | ||||||||||| |||||| Sbjct 3587811 TCTACTCCTGCTAATAGTTTAGCACATTCTTTGTTATTATTATGGGGTCCTGAAGCACAA 3587752 Query 168735 GGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACGGG 168794 || ||||| | ||||||||| | || || | ||| ||||||| || |||||||| Sbjct 3587751 GGAGATTTTACTCGTTGGTGTCAATTAGGTGGTTTGTGGACTTTTGTTGCTCTCCACGGT 3587692 Query 168795 GCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGTAT 168853 ||||| | ||||| ||||| ||| | ||||| |||||||| || || ||| | | | Sbjct 3587691 GCTTTTGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGATCTGTGCAAT-T 3587633 Query 168854 CCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCT 168913 || || || ||||| || || ||||||| ||| || |||||||||||| || || || Sbjct 3587632 GCGACCTTATAATGCAATCGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTGTATTCCT 3587573 Query 168914 CATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAAT 168973 || || || | || || || |||||||||| || || ||| || || |||| || Sbjct 3587572 GATTTATCCATTAGGCCAGTCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTAT 3587513 Query 168974 CTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCATAT 169033 || |||||| | ||||| | ||||| || ||||||||||| ||||| ||||||||||| Sbjct 3587512 ATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAACTGGACGCTGAACCCATTTCATAT 3587453 Query 169034 GATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACAGT 169093 |||||| || || || | ||||| | || |||| | || |||||||||| ||| || Sbjct 3587452 GATGGGAGTTGCCGGCGTATTGGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTACTGT 3587393 Query 169094 AGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTTCAAAGCATTTGACAGCAC 169153 ||| |||||| | | | |||||||||| |||||||| ||| || ||| || || Sbjct 3587392 AGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTGCCTTTAACCCAAC 3587333 Query 169154 TCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTTGG 169213 ||| | || || || ||||||||||| || || ||||| || |||||||| |||||||| Sbjct 3587332 TCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCTCAAATCTTTGG 3587273 Query 169214 TATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGG 169273 | || || ||||| ||||| |||||||||||| | ||||| || || | || Sbjct 3587272 GGTAGCTTTTTCCAATAAACATTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGG 3587213 Query 169274 TCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTT 169333 | | |||| || | | || | | | ||| ||||| || || |||| |||||||| Sbjct 3587212 TTTATGGATGAGCGCTCTTGGAGTGGTCGATCTAGCTCTGAATCTATGTGCCTATGACTT 3587153 Query 169334 TGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAAGAA 169393 ||||| || || || | |||||||||||||| || |||||||| |||||||| || || Sbjct 3587152 CGTTTCTCAGGAAATTCGTGCAGCAGAAGATCCTGAATTTGAGACTTTCTACACTAAAAA 3587093 Query 169394 CATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGAGAA 169453 || ||||| || ||| | ||||||| ||| | || || ||||| |||||||| || Sbjct 3587092 TATTCTCTTAAATGAATTTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAA 3587033 Query 169454 CTTTGTGTTCCCTGAGGAAGTACTTCC 169480 | || | ||||||||||| || || || Sbjct 3587032 CCTTATATTCCCTGAGGAGGTTCTACC 3587006 >seq43 Length=3080068 Score = 464 bits (514), Expect = 7e-126 Identities = 512/682 (75%), Gaps = 0/682 (0%) Strand=Plus/Minus Query 167211 GTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAACATC 167270 || || || |||||||| || ||||| ||| |||| || || | ||||| ||||| || Sbjct 2031173 GTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATT 2031114 Query 167271 ATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCATCTGG 167330 || |||||||| || ||||| ||||| ||||| ||| | || || || || || ||| Sbjct 2031113 ATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTACCCAATATGG 2031054 Query 167331 GAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAGTTTTC 167390 ||||| ||| || | || || ||||| || ||||| |||||| | || | ||||| Sbjct 2031053 GAAGCGGCATCCGTTGATGAATGGTTATATAATGGCAGTCCTTATGAGCTAATTGTTTTA 2030994 Query 167391 CACTTCCTGATTGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCGTCTC 167450 |||||| | |||| | | || |||||||||||||||||||| || |||||| Sbjct 2030993 CACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTG 2030934 Query 167451 GGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTA 167510 |||||||| || ||||| ||||||||| || ||||| || || || || ||||||| Sbjct 2030933 GGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTT 2030874 Query 167511 TTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTATCTCT 167570 ||| | | ||||| | ||||| || || ||||| | |||||||| || |||||| Sbjct 2030873 TTCTTGATTTATCCAATTGGTCAGGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCT 2030814 Query 167571 GGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTC 167630 ||||| ||||||| ||| |||| ||||| || |||||||||||||| |||||||| || Sbjct 2030813 GGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTT 2030754 Query 167631 CATATGCTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCT 167690 || ||| | ||||| ||||| ||||||||||| || || |||||||| ||||| ||||| Sbjct 2030753 CACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCC 2030694 Query 167691 CTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTAC 167750 |||| |||||| || | | |||||||| |||| ||| || || | |||||| Sbjct 2030693 TTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTAC 2030634 Query 167751 AAGTTCGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCGGTCGC 167810 | |||||||| || ||||| || ||||| ||||| |||||||||||||| || || || Sbjct 2030633 AGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGA 2030574 Query 167811 CTGATCTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGGCAGCA 167870 ||||||||||||| || ||||||||||| || || | || |||||| | || || Sbjct 2030573 TTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACATTTCTTCCTAGCTGCT 2030514 Query 167871 TGGCCTGTTGTTGGTATCTGGT 167892 |||||||| || ||||| |||| Sbjct 2030513 TGGCCTGTAGTAGGTATTTGGT 2030492 >seq404 Length=1096556 Score = 408 bits (452), Expect = 5e-109 Identities = 525/731 (72%), Gaps = 2/731 (0%) Strand=Plus/Minus Query 167346 GACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAGTTTTCCACTTCCTGATTGGC 167405 || || ||||| |||||||| ||||||| | || | ||| | |||||| | |||| Sbjct 544499 GATGAATGGTTATACAATGGCGGTCCTTATAAGCTAATTGTTCTACACTTCTTACTTGGT 544440 Query 167406 -ATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCCTG 167464 || ||| ||||| | | |||||||||| || |||| | |||||||| || || Sbjct 544439 GATATATATATATATATATA-TAAGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTG 544381 Query 167465 GATCTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCC 167524 ||| | ||||||| || || || || || | || ||||||| ||| | | ||||| Sbjct 544380 GATTACTATTGCATATTCAGCACCTGTTGCAACTGCTACTGCTGTTTTCTTGATTTATCC 544321 Query 167525 TTTCGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTATCTCTGGTACATTCAACTA 167584 | ||||| || || ||||| | |||||||| || ||||||||||| ||||||| Sbjct 544320 AATTGGTCAGGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTT 544261 Query 167585 CATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGCTCGGCGT 167644 ||| |||| ||||| || |||||||||||||| |||||||| || || ||| | ||||| Sbjct 544260 TATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGT 544201 Query 167645 TGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACCTCTTC 167704 ||||| ||||||||||| || || |||||||| ||||| ||||| |||| |||||| Sbjct 544200 AGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAG 544141 Query 167705 GCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAGGA 167764 || | | |||||||| |||| ||| || || | ||||||| |||||||| || Sbjct 544140 TTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGA 544081 Query 167765 AGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATA 167824 ||||| || ||||| ||||| |||||||||||||| || || || ||||||||||||| Sbjct 544080 GGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATA 544021 Query 167825 CGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGGCAGCATGGCCTGTTGTTGG 167884 || ||||||||||| || || | || |||||| | || || ||||||| || || Sbjct 544020 TGCTAGTTTCAACAACTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGAAGTAGG 543961 Query 167885 TATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCAACCTGAACGGTTTCAACTT 167944 ||| ||| |||||||| || |||||||| || Sbjct 543960 TATTTGGCTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTT 543901 Query 167945 CAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTGCCTACTTGGGCAGACGTGCTCAA 168004 |||||| ||| | |||||||| ||| || | ||| ||||| || | | || Sbjct 543900 CAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAA 543841 Query 168005 CCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCTCTCGA 168064 ||||||| || ||||||||||||||||| || ||||||||||| ||||||||||| || Sbjct 543840 CCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGA 543781 Query 168065 CCTTGCTGCTG 168075 ||| ||||||| Sbjct 543780 CCTAGCTGCTG 543770 Score = 105 bits (116), Expect = 7e-18 Identities = 118/155 (76%), Gaps = 2/155 (1%) Strand=Plus/Minus Query 167130 GGTTGGTTCGGCGTTCTGATGATCCCTACGTTGCTTGCAGCAACCATCTGT-TTCATCAT 167188 || ||||| || ||| ||||||||||||| || | | |||| | ||||| || || || Sbjct 545931 GGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAA-CTTCTGTATTTATTAT 545873 Query 167189 CGCCTTCGTCGGTGCTCCTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTC 167248 ||| ||| | | ||| ||||| || || || |||||||| || ||||| ||| |||| || Sbjct 545872 CGCTTTCATTGCTGCCCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATC 545813 Query 167249 ACTCATGTATGGTAACAACATCATCTCTGGTGCAG 167283 || | ||||| ||||| || || |||||||||| Sbjct 545812 TCTACTTTATGGAAACAATATTATTTCTGGTGCAG 545778 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 167097 TGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCTGATGATCCCT 167156 ||| | ||||||||| | |||||||| || | || ||||| || ||| ||||||||||| Sbjct 546072 TGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 546013 Query 167157 ACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTCCTCCTGTGGA 167215 || || | | |||| | ||||| || || ||||| ||| | | ||| ||||| || || Sbjct 546012 ACTTTATTGACCGCAA-CTTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCGGTAGA 545954 Query 167216 CATCGATGGTATCCG 167230 || |||||||| || Sbjct 545953 TATTGATGGTATTCG 545939 >seq875 Length=443518 Score = 260 bits (288), Expect = 2e-64 Identities = 527/779 (68%), Gaps = 10/779 (1%) Strand=Plus/Minus Query 168722 TCCTGAGGCACAAGGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGT 168781 |||||| |||||||| ||||| | |||||| || | || || | ||| |||| || Sbjct 380475 TCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTTAATTAGGTGGTTTGTGGACTTTAGT 380416 Query 168782 GGCGCTCCACGGGGCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACG 168841 | |||||||| ||||| | ||| | ||||| ||| | ||| | |||||||| || Sbjct 380415 TACTCTCCACGGTGCTTTTGGACTAGTAGGTTTTATGTTACGTTAATTTGAACTTGCT-- 380358 Query 168842 TCTCATCGGTA----TCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTT 168897 | ||| || | | || || ||||| || |||| | ||| | ||||| Sbjct 380357 --TAATCTGTGCAATTACTACCTTATAATGCAATCAAATTCTTTACTCCAACTATTGTTT 380300 Query 168898 TTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTT 168957 ||||| || || | | || || | || | | ||| |||||| || || Sbjct 380299 TTGTTTCTGTATTCTTAACTTATCCATTAGGCTAGTTTGGTTTGTTTTTTATGCCTAGTT 380240 Query 168958 TCGGGGTCTCAGCAATCTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACAC 169017 | || || |||| || || ||||| | ||||| | |||| || ||||| |||| | Sbjct 380239 TAGGTGTAGCAGCTATATTTTGATTCATCCTCTTTTTCCAAGAGTTTCATAATTGGATGC 380180 Query 169018 TGAATCCATTTCATATGATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCA 169077 |||| |||||| ||||||| || || | || || ||||| | | ||||| | || | Sbjct 380179 TGAACCCATTTTATATGATAGGAGTTGTTGGCATATTGGGTGCTGTTTTGCTATGCGCTA 380120 Query 169078 TTCATGGTGTTACAGTAGAGAATACTCTGTATC-AAGATGGTGAACAAGCAAATACTTTC 169136 ||||||||| | | |||| |||||| | | | |||||||||| |||||||| || Sbjct 380119 TTCATGGTGCTGCTATAGAAAATACTTTTTTTTGAAGATGGTGATGGTGCAAATACATTA 380060 Query 169137 AAAGCATTTGACAGCACTCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTC 169196 | || ||| || ||||| | || || || |||||||| || || | |||||||| Sbjct 380059 TATGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATTGTCACCACTAACCGTTTT 380000 Query 169197 TGGTCTCAGATCTTTGGTATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTG 169256 |||||||| || ||||| |||| ||| ||||| | | ||| ||||||||||| | Sbjct 379999 TGGTCTCAAATTTTTGGGGTTGC-TTCTCCAATAAATGTTAGTTACATTTCTTTATATTA 379941 Query 169257 TTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAAC 169316 ||||| || || | ||| | |||| || | | | | | |||| ||||| || Sbjct 379940 TTTGTACCAGTAACTGGTTTATGGATGAGCACTCTTAGAGTGGTCAGTCTGGCTCTGAAT 379881 Query 169317 CTTCGTGCTTATGACTTTGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAG 169376 || ||||| |||||||| ||||| || || | | | | ||| |||||| || |||||| Sbjct 379880 CTACGTGCCTATGACTTCGTTTCTCAGGAAACCCGTGTAGCGAAAGATCTTGAATTTGAG 379821 Query 169377 ACGTTCTACACCAAGAACATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATT 169436 || |||||||| || || || ||||| || |||||| ||| ||| ||| | | || Sbjct 379820 ACTTTCTACACTAAAAATATTCTCTTAAATGAAGGTATTCATGCTTGGATGGTGACTCAA 379761 Query 169437 GATCAACCTCATGAGAACTTTGTGTTCCCTGAGGAAGTACTTCCCCGAGGTAATGCCCT 169495 || | |||||||| || || | |||||| |||| || | || | || ||||| || Sbjct 379760 CATTAGCCTCATGAAAATGTTATATTCCCTAAGGAGGTTTTACCACATGGAAATGCTCT 379702 >seq52 Length=2912074 Score = 212 bits (234), Expect = 7e-50 Identities = 297/414 (72%), Gaps = 2/414 (0%) Strand=Plus/Minus Query 169078 TTCATGGTGTTACAGTAGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTTCA 169137 ||||||||| ||| ||||| |||||| | | | |||||||||| |||||||| ||| Sbjct 2284616 TTCATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCC 2284557 Query 169138 AAGCATTTGACAGCACTCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCT 169197 || ||| || ||||| | || || || ||||||||||| || || ||||| || | Sbjct 2284556 GTGCCTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTT 2284497 Query 169198 GGTCTCAGATCTTTGGTATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGT 169257 ||||||| |||||||| |||| || ||||| | ||||| |||||||||||| | | Sbjct 2284496 GGTCTCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTAT 2284437 Query 169258 TTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACC 169317 |||| || || | ||| | |||| || | | || | | ||| ||||| || | Sbjct 2284436 TTGTACCAGTAACTGGTTTATGGATGAGCGCTCTTGGAGTGGTCAATCTGGCTCTGAATC 2284377 Query 169318 TTCGTGCTTATGACTTTGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGA 169377 | ||||| |||||||| ||||| || || ||| | ||||| |||||||| | | | | Sbjct 2284376 TACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTTATATATATA 2284317 Query 169378 CGT-TCTACACCAAGAACATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATT 169436 | | || | | || || ||||| ||||||||| ||||||| ||| | || || Sbjct 2284316 TATATATATA-TATAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAA 2284258 Query 169437 GATCAACCTCATGAGAACTTTGTGTTCCCTGAGGAAGTACTTCCCCGAGGTAAT 169490 ||||| |||||||| ||| || | ||||||||||| || || || || || ||| Sbjct 2284257 GATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAAT 2284204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560555779364800