Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hevea_20brasiliensis_20[genbank_20GCA_5F001654055.1_202016-06-01] 7,452 sequences; 1,373,365,927 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1752 113 6e-19 >seq1752 Length=70440 Score = 113 bits (124), Expect = 6e-19 Identities = 183/261 (70%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 || ||||| || || || ||||| ||||| || || || || | |||| || || ||| Sbjct 24832 GAATGGATATTTTCAATAGCGATTTGGAATCCATAGAAAGCACGAGCCTCAGCAACCTGG 24891 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || |||||||| || || || || ||||| ||| ||||| || ||| |||||| || Sbjct 24892 ACTTCCTTCATAAAACGTCCAGCGAGGTTTTCGAGAACGATACCATCGGAGGCGGCAAAG 24951 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812 || || || || || ||| |||||| || ||| | || | |||||||| || Sbjct 24952 AATGCAAGAACATGGGTGACAAAGTGCTTTTCATCGGGTGTTAGGGCTTCCCAGTGG-CG 25010 Query 869813 GTG-TCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTA 869871 | | || ||| || |||||||| || ||||| | ||||||||||| || || || Sbjct 25011 GAGATCTTGAGAGAGATCGACCTCCTCAGCAGTCCAAAAGGAGGCCTCGGCTTTCTTATA 25070 Query 869872 CATCTCCCATACTTGCTGGTA 869892 ||| ||||| | ||| |||| Sbjct 25071 CATTTCCCAGATTTGTGGGTA 25091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106527653982284