Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hevea_20brasiliensis_20[genbank_20GCA_5F001654055.1_202016-06-01] 7,452 sequences; 1,373,365,927 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1752 87.8 3e-11 >seq1752 Length=70440 Score = 87.8 bits (96), Expect = 3e-11 Identities = 165/240 (69%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 793893 ACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGC 793952 ||| ||||||| |||||| || || | | ||| || || || ||||| || | ||| Sbjct 24232 ACGGCCGCCTTCTGATACTCTCCAACTCTCTTCTCAAAGAAATTCGTCTTCCCTTGCAGC 24291 Query 793953 GAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGC 794012 ||||||| ||||||||| || || || ||| |||| ||| || |||| ||| Sbjct 24292 GAGATCAGCTCCATCCAATCAAAAGGATTAGCCACATTGTAGATCTTTCCGTACCCAAGC 24351 Query 794013 G-ACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCAT 794071 | || ||| || | || || ||||| ||||||||||||| ||| || | | ||||| Sbjct 24352 GCACCCAA-CAACCTATCAGCCACGAACTCAATGTACTGGCTCATCAGCTCTCCATTCAT 24410 Query 794072 GCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTC 794131 || | | || || |||| |||| |||||||| ||||||| || || || || Sbjct 24411 CCCCACCAAGGCACATGGAAGCGCATCGCACACAAACTCCCTCTCGATATCCACTGCGTC 24470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915453696771428