Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hevea_20brasiliensis_20[genbank_20GCA_5F001654055.1_202016-06-01] 7,452 sequences; 1,373,365,927 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq61 95.1 2e-14 seq765 84.2 3e-11 >seq61 Length=2804743 Score = 95.1 bits (104), Expect = 2e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | |||||| | || || ||||| || || | || ||||| | | Sbjct 1592886 TGCAAATATTTGTGAAAACACTCACTGGGAAAACCATCACGTTGGAAGTAGAGAGTTCGG 1592945 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || | ||||| || ||||| ||| ||||| || || || || ||||| | Sbjct 1592946 ACACCATAGACAATGTGAAGGCAAAAATTCAAGACAAAGAGGGAATCCCGCCAGATCAGC 1593005 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||| | || ||||| |||||||| | || ||| | ||||| | |||||||||| Sbjct 1593006 AGAGATTAATCTTTGCTGGTAAACAGATTGAAGATGGCCGTACGTTGGCTGATTATAATA 1593065 Query 146212 TACAAAAAGAATCGACTATCCATTT 146236 | ||||| ||||| ||| | ||||| Sbjct 1593066 TCCAAAAGGAATCAACTTTACATTT 1593090 >seq765 Length=559349 Score = 84.2 bits (92), Expect = 3e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| || || ||||| || |||||| | || || || | || Sbjct 186514 TGCAGATCTTTGTCAAAACCTTGACCGGAAAGACTATTACTCTGGAGGTCGAGAGCAGCG 186573 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | || || || ||| || || ||| ||||| ||||| || || || | Sbjct 186574 ACACCATTGATAACGTTAAGGCTAAGATTCAGGATAAGGAAGGGATTCCCCCAGACCAGC 186633 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||| ||||| ||||| || ||||| | || || | | || || | |||||||||| Sbjct 186634 AAAGGCTCATCTTTGCTGGAAAACAGCTCGAGGACGGTCGCACTTTGGCCGATTATAATA 186693 Query 146212 TACAAAAAGAATCGAC 146227 | || || ||||| || Sbjct 186694 TTCAGAAGGAATCTAC 186709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786093168599840