Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hevea_20brasiliensis_20[genbank_20GCA_5F001654055.1_202016-06-01] 7,452 sequences; 1,373,365,927 total letters Query= NC_023549.1 Length=56789 Score E Sequences producing significant alignments: (Bits) Value seq499 89.7 2e-13 seq17 89.7 2e-13 >seq499 Length=933419 Score = 89.7 bits (98), Expect = 2e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||||||| ||||||||||||||| | | || ||| ||||||||| |||||||||| | Sbjct 121029 GTTGCGGAGACGGGATTTGAACCCGTGACTTCAAGGTTATGAGCCTTGCGAGCTACCAAG 121088 Query 50170 CTGCTCTACTCCGC 50183 ||||||||| |||| Sbjct 121089 CTGCTCTACCCCGC 121102 >seq17 Length=3754437 Score = 89.7 bits (98), Expect = 2e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||||||| ||||||||||||||| | | || ||| ||||||||| |||||||||| | Sbjct 3583811 GTTGCGGAGACGGGATTTGAACCCGTGACTTCAAGGTTATGAGCCTTGCGAGCTACCAAG 3583752 Query 50170 CTGCTCTACTCCGC 50183 ||||||||| |||| Sbjct 3583751 CTGCTCTACCCCGC 3583738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181587129478824