Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hevea_20brasiliensis_20[genbank_20GCA_5F001654055.1_202016-06-01] 7,452 sequences; 1,373,365,927 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq526 89.7 7e-13 seq1037 87.8 2e-12 >seq526 Length=881737 Score = 89.7 bits (98), Expect = 7e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 51969 AATTTGGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAAATGAATTTACAT 52028 || ||| || | ||| | |||||||||||||||||||||| |||||||||||| | ||| Sbjct 209136 AAGTTGTCTGTTACTTCACCATATAATGCTGATTTTGATGGTGATGAAATGAATATGCAT 209077 Query 52029 GTTCCTCAATCATATGGAGCTA 52050 ||||||||||||| || | ||| Sbjct 209076 GTTCCTCAATCATTTGAAACTA 209055 >seq1037 Length=311975 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 51967 TGAATTTGGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAAATGAATTTAC 52026 |||| ||| || | ||| | |||||||||||||||||||||| ||||||||||| | | Sbjct 173353 TGAACTTGTCTGTTACTTCACCATATAATGCTGATTTTGATGGTGATGAAATGAACATGC 173294 Query 52027 ATGTTCCTCAATCATATG 52044 ||||||||||||||| || Sbjct 173293 ATGTTCCTCAATCATTTG 173276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635118433206560