Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hevea_20brasiliensis_20[genbank_20GCA_5F001654055.1_202016-06-01] 7,452 sequences; 1,373,365,927 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq526 87.8 2e-12 seq1037 82.4 1e-10 >seq526 Length=881737 Score = 87.8 bits (96), Expect = 2e-12 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 50438 CATATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCAATCATATGGAG 50497 |||||||||||||||||||||| |||||||||||| | |||||||||||||||| || | Sbjct 209117 CATATAATGCTGATTTTGATGGTGATGAAATGAATATGCATGTTCCTCAATCATTTGAAA 209058 Query 50498 CTA 50500 ||| Sbjct 209057 CTA 209055 >seq1037 Length=311975 Score = 82.4 bits (90), Expect = 1e-10 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 50417 TGAATTTAGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAAATGAATTTAC 50476 |||| || || | ||| | |||||||||||||||||||||| ||||||||||| | | Sbjct 173353 TGAACTTGTCTGTTACTTCACCATATAATGCTGATTTTGATGGTGATGAAATGAACATGC 173294 Query 50477 ATGTTCCTCAATCATATG 50494 ||||||||||||||| || Sbjct 173293 ATGTTCCTCAATCATTTG 173276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628472652318720