Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hevea_20brasiliensis_20[genbank_20GCA_5F001654055.1_202016-06-01] 7,452 sequences; 1,373,365,927 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq629 98.7 1e-15 >seq629 Length=730630 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 ||||| || | ||| | || | ||||| ||||| || || || || || |||||| | Sbjct 102201 CCTCCACGCAGACGAAGCACAAGATGAAGGGTAGACTCCTTCTGAATATTATAATCGGCC 102142 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | |||| ||| ||||| || || |||||| |||| || | |||||| || ||||| Sbjct 102141 AAGGTGCGACCGTCCTCGAGCTGCTTCCCAGCAAAGATGAGCCTTTGCTGGTCTGGAGGA 102082 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||| || || ||| || || | | || | ||||| || || ||| Sbjct 102081 ATTCCTTCCTTATCCTGAATCTTAGCCTTGACATTGTCGATGGTGTCGCTGCTCTCGACT 102022 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | ||| | |||||||||||||| ||||| ||||| || ||||| Sbjct 102021 TCGAGAGTAATAGTCTTGCCGGTCAAGGTTTTCACGAAGATCTGCAT 101975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488498492126400