Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hevea_20brasiliensis_20[genbank_20GCA_5F001654055.1_202016-06-01]
7,452 sequences; 1,373,365,927 total letters
Query= NC_026923.1
Length=179110
Score E
Sequences producing significant alignments: (Bits) Value
seq17 601 4e-167
seq345 526 2e-144
seq43 444 7e-120
seq404 428 5e-115
seq875 315 8e-81
seq52 235 6e-57
seq968 134 2e-26
>seq17
Length=3754437
Score = 601 bits (666), Expect = 4e-167
Identities = 740/1003 (74%), Gaps = 10/1003 (1%)
Strand=Plus/Minus
Query 159379 TTTGATGTCCTGGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCTGGA 159438
|||||| | ||||||||||| | | || || || || ||||| |||||||| ||
Sbjct 3588003 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGT 3587944
Query 159439 CTCCTACTTCTTCCCACTGCTTATATGGCCATTGGCGGTTGGCTTACTGGCACGACTTTT 159498
|| | || |||| ||| ||| | ||| | || |||||| | || || || || |||
Sbjct 3587943 CTATTGCTCTTTCCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTCACAGGTACAACCTTT 3587884
Query 159499 ATCACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTACCTTGAAGG-TGCTAATTTTCT 159557
| || ||||| ||||| || | || |||||||| | ||||| ||| | || | |
Sbjct 3587883 GTAACCTCATGGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGCTGCAACTTCT-T 3587825
Query 159558 CACGGCAGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGG 159617
|| || || || || || |||||| || | | | |||||| | | || | |||||
Sbjct 3587824 AACCGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTGTTATTATTATGGGG 3587765
Query 159618 TCCTGAGTCTCAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGATTTGGTCCTTTGT 159677
|||||| | ||||| || || || ||||| ||| | || || | ||| | |||||
Sbjct 3587764 TCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTTTGTGGACTTTTGT 3587705
Query 159678 TGCTCTCCACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAATTGCTCG 159737
||||||||||||||| || | || |||||||||||| |||| ||||||||| |||||||
Sbjct 3587704 TGCTCTCCACGGTGCTTTTGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCG 3587645
Query 159738 -TCTAGTTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTG 159796
||| || | || ||||| ||||| || || ||||||| ||| |||||||||||||
Sbjct 3587644 ATCT-GTGCAATTGCGACCTTATAATGCAATCGCATTCTCTGCTCCAATTGCTGTTTTTG 3587586
Query 159797 TCAGCGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCG 159856
| |||||||| || |||||| | || |||||| ||||| ||||| |||||||| |
Sbjct 3587585 TTTCTGTATTCCTGATTTATCCATTAGGCCAGTCTGGTTGGTTTTTTGCGCCTAGTTTTG 3587526
Query 159857 GGGTAGCAGCAATCTTTAGATTC---CTGTTGTTCCTTCAGGGTTTCCACAACTGGACCC 159913
| |||||||| || ||| ||||| || || |||| |||||||| | |||||||| |
Sbjct 3587525 GTGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCA--AGGGTTTC-ATAACTGGACGC 3587469
Query 159914 TCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTGTTGTGTGCAA 159973
| ||||| || ||||||||||||||||| || || | || | || ||| | || || |
Sbjct 3587468 TGAACCCATTTCATATGATGGGAGTTGCCGGCGTATTGGGCGCTGCTCTGCTATGCGCTA 3587409
Query 159974 TCCATGGTGCTACTGTAGAGAACACATTGTTTGAAGATGGAGAACAAGCAAACACATTTA 160033
| ||||||||||||||||| || || || ||||||||||| || ||||| |||||
Sbjct 3587408 TTCATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCC 3587349
Query 160034 AGGCGTTTGAGCCTACTCAAGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCT 160093
|| ||| | || ||||||| ||||| |||||||| |||||||| || |||||||| |
Sbjct 3587348 GTGCCTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTT 3587289
Query 160094 GGTCGCAGATCTTCGGTGTTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGT 160153
|||| || ||||| || || || ||||| || || | ||| | ||||| || ||||| |
Sbjct 3587288 GGTCTCAAATCTTTGGGGTAGCTTTTTCCAATAAACATTGGTTACATTTCTTTATGTTAT 3587229
Query 160154 TTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTTTCAACC 160213
|||| || || | ||| |||||| | || |||| | | | ||| ||| | || |
Sbjct 3587228 TTGTACCAGTAACCGGTTTATGGATGAGCGCTCTTGGAGTGGTCGATCTAGCTCTGAATC 3587169
Query 160214 TTCGTGCTTACGATTTCGTGAGTCAGGAGATTAGAGCAGCAGAAGATCCTGAATTTGAGA 160273
| |||| || || ||||| |||||| ||| | |||||||||||||||||||||||||
Sbjct 3587168 TATGTGCCTATGACTTCGTTTCTCAGGAAATTCGTGCAGCAGAAGATCCTGAATTTGAGA 3587109
Query 160274 CCTTCTACACCAAGAACATCCTATTGAATGAAGGACTTCGTGCTTGGATGGCACCTGCTG 160333
| |||||||| || || || || || |||||| |||||||||||||||| || |
Sbjct 3587108 CTTTCTACACTAAAAATATTCTCTTAAATGAATTTATTCGTGCTTGGATGGCGGCTCAAG 3587049
Query 160334 ATCAACCACATGAAAACTTTATCTTCCCTGAGGAAGTACTACC 160376
|||| || ||||||||| |||| ||||||||||| || |||||
Sbjct 3587048 ATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACC 3587006
>seq345
Length=1218342
Score = 526 bits (582), Expect = 2e-144
Identities = 668/914 (73%), Gaps = 4/914 (0%)
Strand=Plus/Minus
Query 157756 TGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGACATTGACGGCA 157814
||||||| ||||| || || || | ||| | ||||| || || || || ||||| || |
Sbjct 658081 TGCAACT-TCTGTATTTATTATCTCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTA 658023
Query 157815 TCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTG 157874
| || ||||| ||| || | || || | ||||| ||||| || || |||||||| ||
Sbjct 658022 TTCGTGAACCTGTTTCTAGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTA 657963
Query 157875 TTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCATCTGGGAAGCAGCATCTCTTG 157934
|||||| ||| | || || ||| | || || ||||| || |||||||| ||||| |||
Sbjct 657962 TTCCTACTTCTACAGCTATAGGTTTGCATTTTTACCCAATATGGGAAGCGGCATCCGTTG 657903
Query 157935 ACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTAGTATTCCACTTCCTGATCGGCA 157994
| || ||| | || || || ||||||| | || | || | |||||| | | ||
Sbjct 657902 ATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTG 657843
Query 157995 TCTATGCCTATATGGGACGTGAGTGGGAACTCTCTTACCGTTTAGGTATGCGCCCATGGA 158054
| | || ||||| |||||||||||||| || |||||| ||||||||||| ||||
Sbjct 657842 TAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGA 657783
Query 158055 TCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCGAGTGCAGTATTCCTAGTCTATCCTT 158114
| ||| |||||||| ||||| || || || || | ||| || ||| | | |||||
Sbjct 657782 TTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTATCCAA 657723
Query 158115 TCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACA 158174
| ||||| || || || |||| ||||||||| || |||||||||||||| |||| |
Sbjct 657722 TTGGTCAGGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTA 657663
Query 158175 TGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTG 158234
|| |||||||||| || || |||||||||||||||||||| || || ||| | || || |
Sbjct 657662 TGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAG 657603
Query 158235 CTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCCTCAC 158294
|||| |||||||| || || || ||| |||||||||||| | || || || |
Sbjct 657602 CTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTC-TAGT 657544
Query 158295 TCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTACGGTTATAAGTTCGGTCAAGAA 158353
| | || | ||||| || |||| || || || | ||||| | |||||||||||
Sbjct 657543 TTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAG 657484
Query 158354 GAAGAGACCTACAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATAC 158413
||||| || || || ||||| || || ||||| || || || || ||||||||||||||
Sbjct 657483 GAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATAT 657424
Query 158414 GCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGC 158473
||| | ||||||||| |||| ||||| |||||| | ||| | | |||||| || ||
Sbjct 657423 GCTAGTTCCAACAACTCTCGTTTTTTGCATTTCTTCTTAGCTACTTTGCCTGTAGTAGGT 657364
Query 158474 ATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTTCAACTTC 158533
|| ||||||| || | || | || |||| |||||||| || | |||||| |||
Sbjct 657363 ATTTGGTTCATTGCTTTAGGTATTAGCACTATGGTTTTCAACCTAAATGATTTCAATTTC 657304
Query 158534 AACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTACTGAAC 158593
||||| || | ||||| |||| |||| ||| | || |||||||| ||| | | |||
Sbjct 657303 AACCAATCTGTAGTTGATAGTCAAGGTCATGTAATTAATACCTGGGCTGATATTATTAAC 657244
Query 158594 CGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTGGAT 158653
|| ||| ||||||||||||||||||||||| ||||| || || |||||||| || ||
Sbjct 657243 CGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGAC 657184
Query 158654 CTTGCTGCTGCTGA 158667
|| ||||||| |||
Sbjct 657183 CTAGCTGCTGTTGA 657170
>seq43
Length=3080068
Score = 444 bits (492), Expect = 7e-120
Identities = 553/755 (73%), Gaps = 2/755 (0%)
Strand=Plus/Minus
Query 157799 GTGGACATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAACATC 157858
|| || ||||| || || || ||||| ||| |||| || || | ||||| ||||| ||
Sbjct 2031173 GTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATT 2031114
Query 157859 ATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCATCTGG 157918
|| |||||||| || |||||| ||| || || ||| | || || ||||| || |||
Sbjct 2031113 ATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTACCCAATATGG 2031054
Query 157919 GAAGCAGCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTAGTATTC 157978
||||| ||||| |||| || ||| | ||||| || |||||| | || | || ||
Sbjct 2031053 GAAGCGGCATCCGTTGATGAATGGTTATATAATGGCAGTCCTTATGAGCTAATTGTTTTA 2030994
Query 157979 CACTTCCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTCTCTTACCGTTTA 158038
|||||| | | || | | || ||||| |||||||||||||| || |||| |
Sbjct 2030993 CACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTG 2030934
Query 158039 GGTATGCGCCCATGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCGAGTGCAGTA 158098
||||||||||| ||||| ||| |||||||| ||||| || || || || | ||| ||
Sbjct 2030933 GGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTT 2030874
Query 158099 TTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCT 158158
||| | | ||||| | ||||| || || || |||| ||||||||| || ||||||
Sbjct 2030873 TTCTTGATTTATCCAATTGGTCAGGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCT 2030814
Query 158159 GGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTC 158218
|||||||| |||| ||| |||||||||| || || |||||||||||||||||||| ||
Sbjct 2030813 GGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTT 2030754
Query 158219 CATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGT 158278
|| ||| | || || ||||| |||||||| || || || ||| ||||||||||||
Sbjct 2030753 CACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCC 2030694
Query 158279 CTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTACGGTTA 158337
| || || | || | | || | ||||| || |||| || || || | |||||
Sbjct 2030693 TTGGTAACCT-CTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTA 2030635
Query 158338 TAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCAGCCCATGGCTACTTCGGTCG 158397
| ||||||||||| ||||| || || || ||||| || || ||||| || || || ||
Sbjct 2030634 CAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCG 2030575
Query 158398 TTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGC 158457
|||||||||||||| ||| ||||||||||| ||||| || || |||||||| |||||
Sbjct 2030574 ATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACATTTCTTCCTAGCTGC 2030515
Query 158458 ATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCT 158517
|||||||| || || || |||||||| || | || | || ||||| ||||||||
Sbjct 2030514 TTGGCCTGTAGTAGGTATTTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCT 2030455
Query 158518 GAACGGTTTCAACTTCAACCAGTCCATCCTTGATG 158552
|| |||||||| |||||||| || | ||||||
Sbjct 2030454 AAATGGTTTCAATTTCAACCAATCTGTAGTTGATG 2030420
>seq404
Length=1096556
Score = 428 bits (474), Expect = 5e-115
Identities = 486/649 (75%), Gaps = 2/649 (0%)
Strand=Plus/Minus
Query 158016 AGTGGGAACTCTCTTACCGTTTAGGTATGCGCCCATGGATCTGTGTAGCATATTCTGCTC 158075
|||||||||| || |||||| ||||||||||| ||||| | | |||||||| || |
Sbjct 544417 AGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGATTACTATTGCATATTCAGCAC 544358
Query 158076 CAGTCGCTGCAGCGAGTGCAGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCCG 158135
| || || | || | ||| || ||| | | ||||| | ||||| || || || |
Sbjct 544357 CTGTTGCAACTGCTACTGCTGTTTTCTTGATTTATCCAATTGGTCAGGGAAGCTTTTCTG 544298
Query 158136 ATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAAC 158195
||| ||||||||| || |||||||||||||| |||| ||| |||||||||| || || |
Sbjct 544297 ATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGC 544238
Query 158196 ACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTC 158255
||||||||||||||||||| || || ||| | || || ||||| |||||||| || || |
Sbjct 544237 ACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCC 544178
Query 158256 TTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAA 158314
| ||| |||||||||||| | || || || | | | || | ||||| || |||
Sbjct 544177 TATTCAGTGCTATGCATGGTTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACCACAGAA 544119
Query 158315 ACAGAGTCACAGAACTACGGTTATAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTT 158374
| || || || | ||||| | ||||||||||| ||||| || || || |||||
Sbjct 544118 AATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTA 544059
Query 158375 GCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGT 158434
|| || ||||| || || || || |||||||||||||| ||| ||||||||||| |||
Sbjct 544058 GCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGT 543999
Query 158435 TCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGC 158494
|| || || |||||||| ||||| ||||||| || || || ||| |||| || | ||
Sbjct 543998 TCTTTACATTTCTTCCTAGCTGCTTGGCCTGAAGTAGGTATTTGGCTCACTGCTTTAGGT 543939
Query 158495 GTGTCAACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGT 158554
| || ||||| |||||||| || |||||||| |||||||| || | ||||| ||
Sbjct 543938 ATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGT 543879
Query 158555 CAGGGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATGGAA 158614
|| |||||||| | || |||||||| ||| | | ||||| ||| ||||||||||||
Sbjct 543878 CAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAA 543819
Query 158615 GTTATGCATGAGCGTAACGCACACAACTTCCCACTGGATCTTGCTGCTG 158663
||||||||||| ||||| || || |||||||| || || || |||||||
Sbjct 543818 GTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTGCTG 543770
>seq875
Length=443518
Score = 315 bits (348), Expect = 8e-81
Identities = 533/764 (70%), Gaps = 10/764 (1%)
Strand=Plus/Minus
Query 159618 TCCTGAGTCTCAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGATTTGGTCCTTTGT 159677
|||||| | ||||| || || || ||||| || | || || | ||| | || ||
Sbjct 380475 TCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTTAATTAGGTGGTTTGTGGACTTTAGT 380416
Query 159678 TGCTCTCCACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAATTGCTCG 159737
| ||||||||||||| || | || ||||||||||| |||| |||||||| |||||
Sbjct 380415 TACTCTCCACGGTGCTTTTGGACTAGTAGGTTTTATGTTACGTTAATTTGAACTTGCTTA 380356
Query 159738 -TCTAGTTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTG 159796
||| || | | ||||| ||||| || |||| | ||| | | ||||||||
Sbjct 380355 ATCT-GTGCAATTACTACCTTATAATGCAATCAAATTCTTTACTCCAACTATTGTTTTTG 380297
Query 159797 TCAGCGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCG 159856
| |||||| | | |||||| | || ||| | | ||| ||| |||||||| |
Sbjct 380296 TTTCTGTATTCTTAACTTATCCATTAGGCTAGTTTGGTTTGTTTTTTATGCCTAGTTTAG 380237
Query 159857 GGGTAGCAGCAATCTTTAGATTC---CTGTTGTTCCTTCAGGGTTTCCACAACTGGACCC 159913
| |||||||| || ||| ||||| || || |||| || ||||| | || |||| |
Sbjct 380236 GTGTAGCAGCTATATTTTGATTCATCCTCTTTTTCCA--AGAGTTTC-ATAATTGGATGC 380180
Query 159914 TCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTGTTGTGTGCAA 159973
| ||||| || ||||||| ||||||| ||| ||| | |||| | || | || || |
Sbjct 380179 TGAACCCATTTTATATGATAGGAGTTGTTGGCATATTGGGTGCTGTTTTGCTATGCGCTA 380120
Query 159974 TCCATGGTGCTACTGTAGAGAACACATTGTTT-GAAGATGGAGAACAAGCAAACACATTT 160032
| ||||||||| || |||| || || || ||| |||||||| || ||||| |||||
Sbjct 380119 TTCATGGTGCTGCTATAGAAAATACTTTTTTTTGAAGATGGTGATGGTGCAAATACATTA 380060
Query 160033 AAGGCGTTTGAGCCTACTCAAGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTC 160092
| || ||| | || ||||||| ||||| |||||||| || ||||| | ||||| ||
Sbjct 380059 TATGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATTGTCACCACTAACCGTTTT 380000
Query 160093 TGGTCGCAGATCTTCGGTGTTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTG 160152
||||| || || || || ||||| || || || || | | | | ||||| || || ||
Sbjct 379999 TGGTCTCAAATTTTTGGGGTTGC-TTCTCCAATAAATGTTAGTTACATTTCTTTATATTA 379941
Query 160153 TTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTTTCAAC 160212
||||| || || | ||| |||||| | || || | | | |||| ||| | ||
Sbjct 379940 TTTGTACCAGTAACTGGTTTATGGATGAGCACTCTTAGAGTGGTCAGTCTGGCTCTGAAT 379881
Query 160213 CTTCGTGCTTACGATTTCGTGAGTCAGGAGATTAGAGCAGCAGAAGATCCTGAATTTGAG 160272
|| ||||| || || ||||| |||||| | | | ||| |||||| ||||||||||
Sbjct 379880 CTACGTGCCTATGACTTCGTTTCTCAGGAAACCCGTGTAGCGAAAGATCTTGAATTTGAG 379821
Query 160273 ACCTTCTACACCAAGAACATCCTATTGAATGAAGGACTTCGTGCTTGGATGGCACCTGCT 160332
|| |||||||| || || || || || |||||||| ||| ||||||||||| ||
Sbjct 379820 ACTTTCTACACTAAAAATATTCTCTTAAATGAAGGTATTCATGCTTGGATGGTGACTCAA 379761
Query 160333 GATCAACCACATGAAAACTTTATCTTCCCTGAGGAAGTACTACC 160376
|| | || |||||||| |||| |||||| |||| || ||||
Sbjct 379760 CATTAGCCTCATGAAAATGTTATATTCCCTAAGGAGGTTTTACC 379717
>seq52
Length=2912074
Score = 235 bits (260), Expect = 6e-57
Identities = 295/402 (73%), Gaps = 2/402 (0%)
Strand=Plus/Minus
Query 159976 CATGGTGCTACTGTAGAGAACACATTGTTTGAAGATGGAGAACAAGCAAACACATTTAAG 160035
||||||||||||||||| || || || ||||||||||| || ||||| |||||
Sbjct 2284614 CATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGT 2284555
Query 160036 GCGTTTGAGCCTACTCAAGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGG 160095
|| ||| | || ||||||| ||||| |||||||| |||||||| || |||||||| |||
Sbjct 2284554 GCCTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGG 2284495
Query 160096 TCGCAGATCTTCGGTGTTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTT 160155
|| || ||||| || ||||| ||||| || || || ||| | ||||| || ||||| |||
Sbjct 2284494 TCTCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTT 2284435
Query 160156 GTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTTTCAACCTT 160215
|| || || | ||| |||||| | || |||| | | ||| ||| | || ||
Sbjct 2284434 GTACCAGTAACTGGTTTATGGATGAGCGCTCTTGGAGTGGTCAATCTGGCTCTGAATCTA 2284375
Query 160216 CGTGCTTACGATTTCGTGAGTCAGGAGATTAGAGCAGCAGAAGATCCTGAATTTGAGACC 160275
||||| || || ||||| |||||| || | ||||| ||||||||| | | | |
Sbjct 2284374 CGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTTATATATATATA 2284315
Query 160276 T-TCTACACCAAGAACATCCTATTGAATGAAGGACTTCGTGCTTGGATGGCACCTGCTGA 160334
| | || | | || || || || || ||||| |||||||||||||||| || ||
Sbjct 2284314 TATATATA-TATAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGA 2284256
Query 160335 TCAACCACATGAAAACTTTATCTTCCCTGAGGAAGTACTACC 160376
||| || ||||||||| |||| ||||||||||| || |||||
Sbjct 2284255 TCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACC 2284214
>seq968
Length=362283
Score = 134 bits (148), Expect = 2e-26
Identities = 277/407 (68%), Gaps = 4/407 (1%)
Strand=Plus/Plus
Query 159972 AATCCATGGTGCTACTGTAGAGAAC-ACATTGTTTGAAGATGGAGAACAAGCAAACACAT 160030
||| |||| ||||||| |||| || | || ||||||||||| || ||||| | ||
Sbjct 360885 AATTCATGATGCTACTATAGAAAAATATTTTATTTGAAGATGGCGATGGTGCAAATAAAT 360944
Query 160031 T-TAAGGCGTTTGAGCCTACTCAAGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGC 160089
| | | | || | || |||||| |||| |||||||| ||||| || ||||| |||
Sbjct 360945 TATGTGTCTTTAAATCCAACTCAAACTAAAGAAACTTATTCAATGGTTACCGCAAATCGC 361004
Query 160090 TTCTGGTCGCAGATCTTCGGTGTTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATG 160149
|| ||||| || || | | ||||| ||||| | || | ||| | ||||| ||||||
Sbjct 361005 TTTTGGTCTCAAATATATTGGGTTGCTTTTTCCATAAA-CATTGGTTACATTTCTTCATG 361063
Query 160150 TTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTTTC 160209
|| || || | || | || |||| | || || | | | || | ||| |
Sbjct 361064 TTATT-GTACTAGTAACCAGTTTATGAATGAGTACTCTTAGAGTGGTCAGTTTAGCTCTA 361122
Query 160210 AACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATTAGAGCAGCAGAAGATCCTGAATTT 160269
||| | | || || | ||||| ||| || ||| | | || ||| |||||||||||
Sbjct 361123 AACATACATGGCTATGGCTTCGTTTCTCAAGAAATTTGTGTAGTGGAATATCCTGAATTT 361182
Query 160270 GAGACCTTCTACACCAAGAACATCCTATTGAATGAAGGACTTCGTGCTTGGATGGCACCT 160329
|| || | || ||| || || || || || || |||| ||| ||||||||||| ||
Sbjct 361183 GAAACTTGCTTCACTAAAAATATTCTCTTAAACAAAGGTATTCATGCTTGGATGGTGGCT 361242
Query 160330 GCTGATCAACCACATGAAAACTTTATCTTCCCTGAGGAAGTACTACC 160376
||| | | ||||||||| |||| |||||| |||| || |||||
Sbjct 361243 CAAGATTAGACTCATGAAAACCTTATATTCCCTAAGGAGGTTCTACC 361289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 572970622814400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |