Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hevea_20brasiliensis_20[genbank_20GCA_5F001654055.1_202016-06-01] 7,452 sequences; 1,373,365,927 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq46 86.0 6e-12 >seq46 Length=2947087 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 34607 CAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATG 34666 || ||||| || || |||||||| ||||||| || | ||||| ||||| | |||||| Sbjct 704925 CAGTTCTATGTAGCCAATGGGGAATTGTCCTGTCAAATGTATCAGCGATCTGCTGACATG 704984 Query 34667 GGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCAT 34726 || | || ||||| ||||||||||| ||| || || || || | |||||| ||||| Sbjct 704985 GGCCTGGGTGTGCCATTCAACATTGCATCTTATGCCCTCCTTACATGCATGATTGCTCAC 705044 Query 34727 GT 34728 || Sbjct 705045 GT 705046 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 || ||||| |||||| | || || || || ||| ||||||||||| ||||| || | Sbjct 705046 ACGTGAGCAATCATGCATGTAAGGAGGGCATAAGATGCAATGTTGAATGGCACACCCAGG 704987 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAAT 6736 |||||||| | ||||| ||||| | || ||||||| |||||||| || || ||||| Sbjct 704986 CCCATGTCAGCAGATCGCTGATACATTTGACAGGACAATTCCCCATTGGCTACATAGAAC 704927 Query 6737 TG 6738 || Sbjct 704926 TG 704925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448220644357440