Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hevea_20brasiliensis_20[genbank_20GCA_5F001654055.1_202016-06-01] 7,452 sequences; 1,373,365,927 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq765 82.4 6e-11 >seq765 Length=559349 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101029 CACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTC 101088 ||| | ||| | ||| ||||| || ||||| |||||||| |||| ||| | |||||| Sbjct 186950 CACAAGGTGGAGAGTGGATTCCTTCTGAATGTTGTAATCAGCCAAAGTCCGGCCATCTTC 186891 Query 101089 CAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGC 101148 || ||||| || || | || ||||| || |||||| || | || || ||||| Sbjct 186890 CAGCTGTTTCCCAGCGAAGATCAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCCTG 186831 Query 101149 AATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTT 101208 |||||| || |||| | | || || || | |||| |||||||||||| Sbjct 186830 TATTTTTGCCTTGACATTATCAATAGTGTCGCTGCTCTCCACCTCGAGGGTAATAGTTTT 186771 Query 101209 GCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || ||||| || |||| ||||| ||||| Sbjct 186770 TCCAGTCAAGGTCTTAACGAAAATCTGCAT 186741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409623594094068