Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hevea_20brasiliensis_20[genbank_20GCA_5F001654055.1_202016-06-01] 7,452 sequences; 1,373,365,927 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value seq345 601 4e-167 seq17 520 1e-142 seq43 509 2e-139 seq404 480 1e-130 seq875 224 1e-53 seq52 183 4e-41 seq65 113 5e-20 seq941 95.1 1e-14 seq251 95.1 1e-14 seq1225 93.3 5e-14 seq1475 91.5 2e-13 >seq345 Length=1218342 Score = 601 bits (666), Expect = 4e-167 Identities = 680/907 (75%), Gaps = 3/907 (0%) Strand=Plus/Minus Query 177686 TCTGT-TTCATCGTCGCTTTCGTCGCTGCTCCTCCTGTGGACATCGACGGCATCCGTGAA 177744 ||||| || || || ||||| | ||||| ||||| || || || || || || |||||| Sbjct 658074 TCTGTATTTATTATCTCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAA 658015 Query 177745 CCCGTCGCTGGTTCCCTGATGTATGGCAACAACATCATTTCTGGTGCTGTTGTTCCTTCT 177804 || || || | || || | ||||| ||||| || ||||||||||| || ||||| || Sbjct 658014 CCTGTTTCTAGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTACT 657955 Query 177805 TCTAACGCTATTGGTCTCCACTTCTATCCCATCTGGGAAGCAGCTTCTCTCGATGAGTGG 177864 |||| ||||| ||| | || || || || || |||||||| || || | ||||| ||| Sbjct 657954 TCTACAGCTATAGGTTTGCATTTTTACCCAATATGGGAAGCGGCATCCGTTGATGAATGG 657895 Query 177865 CTCTACAATGGTGGTCCTTTCCAACTCGTTATCTTCCACTTCCTGATCGGTATCTATGCA 177924 | |||||||| ||||||| | || || | | |||||| | | ||| | | Sbjct 657894 TTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGT 657835 Query 177925 TACATGGGTCGTGAGTGGGAACTTTCTTACCGCCTAGGTATGCGTCCCTGGATCTGTGTA 177984 |||||||||||||||||||||||| || ||| | |||||||| || ||||| ||| Sbjct 657834 TACATGGGTCGTGAGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTGGATTGCTGTT 657775 Query 177985 GCATACTCTGCTCCAGTCGCCGCAGCATCTGCTGTATTCCTTGTTTATCCTTTCGGTCAA 178044 ||||| || ||||| || || || || ||||||| ||| | ||||||| | ||||| Sbjct 657774 GCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTATCCAATTGGTCAG 657715 Query 178045 GGTTCTTTCTCTGACGCTATGCCCCTGGGTATCAGTGGCACCTTCAACTACATGCTTGTC 178104 || || ||||| | |||||| || || ||| ||| || ||||||| ||| |||| Sbjct 657714 GGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTA 657655 Query 178105 TTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGTTGGGCGTCGCTGGTGTC 178164 ||||| || |||||||||||||| |||||||| || |||||||| ||||| |||||||| Sbjct 657654 TTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGTA 657595 Query 178165 TTTGGTGGTTCTCTGTTCAGTGCGATGCACGGTTCTCTGGTTACTTCCTCGCTGGTTC-G 178223 || || || || || |||||||| ||||| ||||| |||| || || | | | | || | Sbjct 657594 TTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTC-TAGTTTGATCAG 657536 Query 178224 TGAAACCACCGAGAACGAAAGTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGAC 178283 |||||||| || || ||| | || | ||||||| ||||||||||| ||||| || Sbjct 657535 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAAC 657476 Query 178284 CTACAACATCGTTGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCATCCTT 178343 || || ||||| |||||||||||||| || || || ||||||||||||| || | Sbjct 657475 TTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTC 657416 Query 178344 CAACAACTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTT 178403 ||||||||| |||| |||| |||||| | || | | |||||| || ||||| ||||| Sbjct 657415 CAACAACTCTCGTTTTTTGCATTTCTTCTTAGCTACTTTGCCTGTAGTAGGTATTTGGTT 657356 Query 178404 CACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTC 178463 || |||| | ||| ||||||| |||| |||||||| || | |||||| |||||||| || Sbjct 657355 CATTGCTTTAGGTATTAGCACTATGGTTTTCAACCTAAATGATTTCAATTTCAACCAATC 657296 Query 178464 CATCATGGATAGTCAGGGCAAAGTCCTGAACACCTGGGCAGACGTTCTCAACCGTGCTGG 178523 | | |||||||| || | || | || |||||||| || || | ||||||||| Sbjct 657295 TGTAGTTGATAGTCAAGGTCATGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAA 657236 Query 178524 TCTTGGTATGGAAGTCATGCACGAGCGTAATGCTCACAACTTCCCTCTTGACCTCGCTGC 178583 |||||||||||||| ||||| || ||||||||||| ||||||||||| ||||| ||||| Sbjct 657235 CCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTGC 657176 Query 178584 TGCTGAA 178590 || |||| Sbjct 657175 TGTTGAA 657169 >seq17 Length=3754437 Score = 520 bits (576), Expect = 1e-142 Identities = 718/999 (72%), Gaps = 14/999 (1%) Strand=Plus/Minus Query 178839 TTTGATGTACTCGATGACTGGCTTAAGCGTGATCGGTTCGTTTTTGTTGGTTGGTCAGGT 178898 |||||| | | ||||||||| | | | || || ||||||||||| |||||||| ||| Sbjct 3588003 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGT 3587944 Query 178899 CTTCTTCTGTTCCCTACTGCTTACATGGCACTGGGCGGTTGGCTCACGGGCACAACATTC 178958 || | || || ||| ||| || | || | || |||||| |||| || ||||| || Sbjct 3587943 CTATTGCTCTTTCCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTCACAGGTACAACCTTT 3587884 Query 178959 GTCACCTCGTGGTATACTCACGGGATTGCTTCTTCGTATCTTGAGGGATGTAATTTCCTT 179018 || ||||| |||||||| || || | || ||| ||| | || || || || ||| | Sbjct 3587883 GTAACCTCATGGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGCTGCAACTTCTTA 3587824 Query 179019 ACTGCTGCTGTATCAACTCCTGCTGACGCTCTCGGACATTCCCTACTTCTTCTATGGGGT 179078 || || || || || ||||||||| | | | | |||||| | | | |||||||| Sbjct 3587823 ACCGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACATTCTTTGTTATTATTATGGGGT 3587764 Query 179079 CCAGAAGCTCAGGGAGATTTCGTCCGCTGGCTCCAACTTGGGGGACTATGGCCTTTTGTG 179138 || ||||| || |||||||| || ||| ||| | || || | ||| ||||||| Sbjct 3587763 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTTTGTGGACTTTTGTT 3587704 Query 179139 GCGCTCCACGGTGCCTTCGCTCTCATAGGTTTCATGCTTCGGCAGTTTGAAATCGCACG- 179197 || ||||||||||| || | || |||||||| ||| | || || |||||| | || || Sbjct 3587703 GCTCTCCACGGTGCTTTTGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGCTCGA 3587644 Query 179198 TCTAGTCGGTATT-CGTCCTTACAATGCAATCGCGTTTTCTGGTCCAATTGCTGTCTTTG 179256 ||| || | ||| || ||||| ||||||||||| || |||| |||||||||||| |||| Sbjct 3587643 TCT-GT-GCAATTGCGACCTTATAATGCAATCGCATTCTCTGCTCCAATTGCTGTTTTTG 3587586 Query 179257 TGTCTGTTTTTCTCATGTATCCTCTCGGACAGTCCTCGTGGTTCTTTGCGCCGTCGTTTG 179316 | ||||| || || || ||||| | || ||||| ||||| |||||||| |||| Sbjct 3587585 TTTCTGTATTCCTGATTTATCCATTAGGCCAGTCTGGTTGGTTTTTTGCGCCTAGTTTTG 3587526 Query 179317 GAGTTGCAGCGATTTTCCGCTTCCTACTCTTCCTACAGGGCTTCCACAACTGGACGCTCA 179376 | || ||||| || || || ||| | ||||| | || || || || ||||||||||| | Sbjct 3587525 GTGTAGCAGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAACTGGACGCTGA 3587466 Query 179377 ACCCGTTCCACATGATGGGTGTAGCAGGTATCCTGGGCGGAGCATTGCTTTGTGCCATTC 179436 |||| || || |||||||| || || || | |||||| || |||| || || |||| Sbjct 3587465 ACCCATTTCATATGATGGGAGTTGCCGGCGTATTGGGCGCTGCTCTGCTATGCGCTATTC 3587406 Query 179437 ATGGTGCTACAGTAGAGAACACACTCTTTGAAGACAGTGACCAATCAAATACATTCAAGG 179496 |||||||||| ||||| || || | |||||||| |||| ||||||||||| | Sbjct 3587405 ATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGTG 3587346 Query 179497 CATTCGAGCCTACACAAGAAGAGGAGACCTATTCGATGGTTACTGCCAACCGTTTCTGGT 179556 | || | || || |||| || || || ||||| ||||| || || ||||| || |||| Sbjct 3587345 CCTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGT 3587286 Query 179557 CTCAGATCTTTGGTATCGCCTTCAGCAATAAGCGTTGGCTACATTTCTTTATGTTGTTTG 179616 |||| |||||||| | || || |||||| | |||| |||||||||||||||| |||| Sbjct 3587285 CTCAAATCTTTGGGGTAGCTTTTTCCAATAAACATTGGTTACATTTCTTTATGTTATTTG 3587226 Query 179617 TTCCTGTCATGGGTCTTTGGA-----CCTCTAGCATTGGTATTATTGGTCTTGCACTTAA 179671 | || || | ||| | |||| |||| | | ||| | | ||| || || || Sbjct 3587225 TACCAGTAACCGGTTTATGGATGAGCGCTCTTGGAGTGG-----TCGATCTAGCTCTGAA 3587171 Query 179672 CCTTAGAGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAGAGGATCCTGAGTTCGA 179731 || | || |||||||| ||||| || || || | || ||||| |||||||| || || Sbjct 3587170 TCTATGTGCCTATGACTTCGTTTCTCAGGAAATTCGTGCAGCAGAAGATCCTGAATTTGA 3587111 Query 179732 GACGTTCTATACCAAGAACATCCTATTGAATGAAGGTCTACGTGCTTGGATGGCACCAGT 179791 ||| ||||| || || || || || || |||||| | | |||||||||||||| | Sbjct 3587110 GACTTTCTACACTAAAAATATTCTCTTAAATGAATTTATTCGTGCTTGGATGGCGGCTCA 3587051 Query 179792 CGATCAACCACATGAAAACTTTGTATTTCCTGAAGAAGT 179830 ||||| || ||||||||| || |||| ||||| || || Sbjct 3587050 AGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGT 3587012 >seq43 Length=3080068 Score = 509 bits (564), Expect = 2e-139 Identities = 561/744 (75%), Gaps = 2/744 (0%) Strand=Plus/Minus Query 177721 GTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTATGGCAACAACATC 177780 || || || || || || |||||||| || |||| || || | ||||| ||||| || Sbjct 2031173 GTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAATATT 2031114 Query 177781 ATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTATCCCATCTGG 177840 ||||||||||| || ||||| ||||| ||||| ||| | || || || || || ||| Sbjct 2031113 ATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATAGGTTTGCATTTTTACCCAATATGG 2031054 Query 177841 GAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCAACTCGTTATCTTC 177900 ||||| || || | ||||| ||| | || ||||| |||||| | || || | || Sbjct 2031053 GAAGCGGCATCCGTTGATGAATGGTTATATAATGGCAGTCCTTATGAGCTAATTGTTTTA 2030994 Query 177901 CACTTCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGGGAACTTTCTTACCGCCTA 177960 |||||| | | ||| | | |||||||||||||||||||||||| || ||| || Sbjct 2030993 CACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTG 2030934 Query 177961 GGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGCATCTGCTGTA 178020 |||||||| || ||||| ||| ||||| || ||||| || || || || ||||||| Sbjct 2030933 GGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTT 2030874 Query 178021 TTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGGTATCAGT 178080 ||| | ||||||| | ||||| || || ||||| | |||||| || || ||| | Sbjct 2030873 TTCTTGATTTATCCAATTGGTCAGGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCT 2030814 Query 178081 GGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTC 178140 || || ||||||| ||| |||| ||||| || |||||||||||||| |||||||| || Sbjct 2030813 GGTACTTTCAACTTTATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTT 2030754 Query 178141 CACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCACGGTTCT 178200 |||||||| ||||| |||||||| || || || || || |||||||| ||||| ||||| Sbjct 2030753 CACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCC 2030694 Query 178201 CTGGTTACTTCCTCGCTGGTTC-GTGAAACCACCGAGAACGAAAGTCAGAACTATGGTTA 178259 |||| || || | | | | || | |||||||| || || ||| | || | ||||| Sbjct 2030693 TTGGTAACCTC-TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTA 2030635 Query 178260 CAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTACTTCGGTCG 178319 || ||||||||||| ||||| || || || ||||| |||||||||||||| || || || Sbjct 2030634 CAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCG 2030575 Query 178320 CCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCGCAGC 178379 ||||||||||||| || ||||||||||| ||||| | || |||||||| || || Sbjct 2030574 ATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACATTTCTTCCTAGCTGC 2030515 Query 178380 ATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCT 178439 |||||||| || ||||| |||||||||||| | ||| ||||||| ||||| |||||||| Sbjct 2030514 TTGGCCTGTAGTAGGTATTTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCT 2030455 Query 178440 CAACGGTTTCAACTTCAACCAGTC 178463 || |||||||| |||||||| || Sbjct 2030454 AAATGGTTTCAATTTCAACCAATC 2030431 >seq404 Length=1096556 Score = 480 bits (532), Expect = 1e-130 Identities = 549/732 (75%), Gaps = 4/732 (1%) Strand=Plus/Minus Query 177856 GATGAGTGGCTCTACAATGGTGGTCCTTTCCAACTCGTTATCTTCCACTTCCTGATCGGT 177915 ||||| ||| | |||||||| ||||||| | || || | | |||||| | | ||| Sbjct 544499 GATGAATGGTTATACAATGGCGGTCCTTATAAGCTAATTGTTCTACACTTCTTACTTGGT 544440 Query 177916 -ATCTATGCATACATGGGTCGTGAGTGGGAACTTTCTTACCGCCTAGGTATGCGTCCCTG 177974 || ||| ||| || | | ||||||||||| || ||| | |||||||| || || Sbjct 544439 GATATATATATATATATATA-TAAGTGGGAACTTAGTTTCCGTTTGGGTATGCGCCCTTG 544381 Query 177975 GATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGCATCTGCTGTATTCCTTGTTTATCC 178034 ||| | | ||||| || || || || || | || ||||||| ||| | ||||||| Sbjct 544380 GATTACTATTGCATATTCAGCACCTGTTGCAACTGCTACTGCTGTTTTCTTGATTTATCC 544321 Query 178035 TTTCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGGTATCAGTGGCACCTTCAACTA 178094 | ||||| || || ||||| | |||||| || || ||| ||| || ||||||| Sbjct 544320 AATTGGTCAGGGAAGCTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTT 544261 Query 178095 CATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGTTGGGCGT 178154 ||| |||| ||||| || |||||||||||||| |||||||| || |||||||| ||||| Sbjct 544260 TATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGT 544201 Query 178155 CGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCACGGTTCTCTGGTTACTTCCTC 178214 |||||||| || || || || || |||||||| ||||| ||||| |||| || || | Sbjct 544200 AGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTC-TA 544142 Query 178215 GCTGGTTC-GTGAAACCACCGAGAACGAAAGTCAGAACTATGGTTACAAGTTCGGTCAAG 178273 | | | || | |||||||| || || ||| | || | ||||||| |||||||||| Sbjct 544141 GTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAG 544082 Query 178274 AAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAAT 178333 | ||||| || || || ||||| |||||||||||||| || || || |||||||||||| Sbjct 544081 AGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAAT 544022 Query 178334 ACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCG 178393 | || ||||||||||| ||||| | || |||||||| || || ||||||| || | Sbjct 544021 ATGCTAGTTTCAACAACTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGAAGTAG 543962 Query 178394 GTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACT 178453 |||| ||| |||||||| | ||| ||||||| ||||| |||||||| || |||||||| | Sbjct 543961 GTATTTGGCTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAATGGTTTCAATT 543902 Query 178454 TCAACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTGAACACCTGGGCAGACGTTCTCA 178513 ||||||| || | | |||||||| || || | || |||||||| || || | | Sbjct 543901 TCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTA 543842 Query 178514 ACCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTAATGCTCACAACTTCCCTCTTG 178573 |||||||| |||||||||||||| ||||| || ||||||||||| ||||||||||| | Sbjct 543841 ACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAG 543782 Query 178574 ACCTCGCTGCTG 178585 |||| ||||||| Sbjct 543781 ACCTAGCTGCTG 543770 Score = 93.3 bits (102), Expect = 5e-14 Identities = 114/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 177640 GGTTGGTTCGGTGTCCTGATGATCCCTACGCTGCTCGCTGCTGCTATCTGT-TTCATCGT 177698 || ||||| ||||| ||||||||||||| | | | || || ||||| || || | Sbjct 545931 GGATGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTAT 545873 Query 177699 CGCTTTCGTCGCTGCTCCTCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTC 177758 ||||||| | ||||| ||||| || || || || || || |||||||| || |||| || Sbjct 545872 CGCTTTCATTGCTGCCCCTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATC 545813 Query 177759 CCTGATGTATGGCAACAACATCATTTCTGGTGC 177791 || | ||||| ||||| || ||||||||||| Sbjct 545812 TCTACTTTATGGAAACAATATTATTTCTGGTGC 545780 >seq875 Length=443518 Score = 224 bits (248), Expect = 1e-53 Identities = 525/783 (67%), Gaps = 18/783 (2%) Strand=Plus/Minus Query 179078 TCCAGAAGCTCAGGGAGATTTCGTCCGCTGGCTCCAACTTGGGGGACTATGGCCTTTTGT 179137 ||| ||||| || |||||||| || ||| || | || || | ||| |||| || Sbjct 380475 TCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTTAATTAGGTGGTTTGTGGACTTTAGT 380416 Query 179138 GGCGCTCCACGGTGCCTTCGCTCTCATAGGTTTCATGCTTCGGCAGTTTGAAATCGCACG 179197 | ||||||||||| || | || ||||||| ||| | || | |||||| | || Sbjct 380415 TACTCTCCACGGTGCTTTTGGACTAGTAGGTTTTATGTTACGTTAATTTGAACTTGCT-- 380358 Query 179198 TCTAGTCGGT---ATTCGT-CCTTACAATGCAATCGCGTTTTCTGGTCCAATTGCTGTCT 179253 || || || ||| | ||||| ||||||||| || | | ||||| | ||| | Sbjct 380357 --TAATCTGTGCAATTACTACCTTATAATGCAATCAAATTCTTTACTCCAACTATTGTTT 380300 Query 179254 TTGTGTCTGTTTTTCTCATGTATCCTCTCGGACAGTCCTCGTGGTTCTTTGCGCCGTCGT 179313 |||| ||||| || | | ||||| | || ||| | ||| ||| ||| | || Sbjct 380299 TTGTTTCTGTATTCTTAACTTATCCATTAGGCTAGTTTGGTTTGTTTTTTATGCC-TAGT 380241 Query 179314 TT-GGAGTTGCAGCGATTTTCCGCTTCCTACTCTTCCTACAGGGCTTCCACAACTGGACG 179372 || || || ||||| || || | ||| | ||||| | || | || || || |||| | Sbjct 380240 TTAGGTGTAGCAGCTATATTTTGATTCATCCTCTTTTTCCAAGAGTTTCATAATTGGATG 380181 Query 179373 CTCAACCCGTTCCACATGATGGGTGTAGCAGGTATCCTGGGCGGAGCATTGCTTTGTGCC 179432 || ||||| || | ||||| || || | || || |||| | | ||||| || || Sbjct 380180 CTGAACCCATTTTATATGATAGGAGTTGTTGGCATATTGGGTGCTGTTTTGCTATGCGCT 380121 Query 179433 ATTCATGGTGCTACAGTAGAGAACACACTCTTT-GAAGACAGTGACCAATCAAATACATT 179491 |||||||||||| | |||| || || | ||| ||||| |||| |||||||||| Sbjct 380120 ATTCATGGTGCTGCTATAGAAAATACTTTTTTTTGAAGATGGTGATGGTGCAAATACATT 380061 Query 179492 CAAGGCATTCGAGCCTACACAAGAAGAGGAGACCTATTCGATGGTTACTGCCAACCGTTT 179551 | || || | || || |||| || || || ||||| || || || | |||||||| Sbjct 380060 ATATGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATTGTCACCACTAACCGTTT 380001 Query 179552 CTGGTCTCAGATCTTTGGTATCGCCTTCAGCAATAAGCGTTGGCTACATTTCTTTATGTT 179611 |||||||| || ||||| | || ||| |||||| ||| | ||||||||||||| || Sbjct 380000 TTGGTCTCAAATTTTTGGGGTTGC-TTCTCCAATAAATGTTAGTTACATTTCTTTATATT 379942 Query 179612 GTTTGTTCCTGTCATGGGTCTTTGGACCTCTAGCATTGGTATTATTG---GTCTTGCACT 179668 ||||| || || | ||| | |||| |||| | || | | |||| || || Sbjct 379941 ATTTGTACCAGTAACTGGTTTATGGATG---AGCACTCTTAGAGTGGTCAGTCTGGCTCT 379885 Query 179669 TAACCTTAGAGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAGAGGATCCTGAGTT 179728 || || | || |||||||| ||||| || || | | | | || | |||| ||| || Sbjct 379884 GAATCTACGTGCCTATGACTTCGTTTCTCAGGAAACCCGTGTAGCGAAAGATCTTGAATT 379825 Query 179729 CGAGACGTTCTATACCAAGAACATCCTATTGAATGAAGGTCTACGTGCTTGGATGGCACC 179788 ||||| ||||| || || || || || || ||||||||| | | ||||||||||| | Sbjct 379824 TGAGACTTTCTACACTAAAAATATTCTCTTAAATGAAGGTATTCATGCTTGGATGGTGAC 379765 Query 179789 AGTCGATCAACCACATGAAAACTTTGTATTTCCTGAAGAAGTATTGCCAAGAGGCAACGC 179848 || | || |||||||| || |||| ||| | || || || ||| || || || Sbjct 379764 TCAACATTAGCCTCATGAAAATGTTATATTCCCTAAGGAGGTTTTACCACATGGAAATGC 379705 Query 179849 TCT 179851 ||| Sbjct 379704 TCT 379702 >seq52 Length=2912074 Score = 183 bits (202), Expect = 4e-41 Identities = 284/403 (70%), Gaps = 12/403 (3%) Strand=Plus/Minus Query 179434 TTCATGGTGCTACAGTAGAGAACACACTCTTTGAAGACAGTGACCAATCAAATACATTCA 179493 ||||||||||||| ||||| || || | |||||||| |||| ||||||||||| Sbjct 2284616 TTCATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCC 2284557 Query 179494 AGGCATTCGAGCCTACACAAGAAGAGGAGACCTATTCGATGGTTACTGCCAACCGTTTCT 179553 || || | || || |||| || || || ||||| ||||| || || ||||| || | Sbjct 2284556 GTGCCTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTT 2284497 Query 179554 GGTCTCAGATCTTTGGTATCGCCTTCAGCAATAAGCGTTGGCTACATTTCTTTATGTTGT 179613 ||||||| |||||||| | || || |||||| |||||| |||||||||||||||| | Sbjct 2284496 GGTCTCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTAT 2284437 Query 179614 TTGTTCCTGTCATGGGTCTTTGGA-----CCTCTAGCATTGGTATTATTGGTCTTGCACT 179668 |||| || || | ||| | |||| |||| | | ||| | ||| || || Sbjct 2284436 TTGTACCAGTAACTGGTTTATGGATGAGCGCTCTTGGAGTGG-----TCAATCTGGCTCT 2284382 Query 179669 TAACCTTAGAGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAGAGGATCCTGAGTT 179728 || || | || |||||||| ||||| || || ||| | || || || |||||| | | Sbjct 2284381 GAATCTACGTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCTTATAT 2284322 Query 179729 CGAGACGT-TCTATACCAAGAACATCCTATTGAATGAAGGTCTACGTGCTTGGATGGCAC 179787 | | | | |||| | || || || || || |||||| | |||||||||||||| Sbjct 2284321 ATATATATATATATA-TATAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGG 2284263 Query 179788 CAGTCGATCAACCACATGAAAACTTTGTATTTCCTGAAGAAGT 179830 | ||||| || ||||||||| || |||| ||||| || || Sbjct 2284262 CTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGT 2284220 >seq65 Length=2714061 Score = 113 bits (124), Expect = 5e-20 Identities = 166/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 176156 GTGTGCTGACGATCAGTATATTCTGGATGCTGCTGAGGAAGCAGGAGTTGAACTCAACTA 176215 |||| |||| ||| |||||||| |||||| ||||||||| || ||||| || || Sbjct 204674 GTGTCCTGATGATGTCTATATTCTTGATGCTTTTGAGGAAGCTGGTGTTGACCTGCCATA 204615 Query 176216 CTCGTGCCGCGCTGGTGCCTGTTCGAGTTGTGCAGGAAAACTCATCTCGGGCACGGTAGA 176275 ||| ||| | |||||| | || || |||||| || ||| | | | || || || || Sbjct 204614 CTCATGCAGGGCTGGTTCTTGCTCTTCTTGTGCTGGGAAAGTTGTAGCAGGAACTGTGGA 204555 Query 176276 TCAAAGCGATCAATCGTTCCTTGATGATGACCAGATCGATGCAGGTTTCATTCTGACTTG 176335 ||| |||| |||||||| ||||||||||| ||||| |||| |||| ||||| Sbjct 204554 TCAGTCCGATGGGAGCTTCCTTGACGATGACCAGATTGATGCTGGTTGGGTTCTCACTTG 204495 Query 176336 TGTTTCATATCCTACGAGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGAACTT 176390 ||| | |||||| | ||| ||| || ||||| | || || ||||| ||| Sbjct 204494 TGTCGCTTATCCTCAGTCTGATATTGTCATCGAGACACACAAGGAGGAGGAGCTT 204440 >seq941 Length=398018 Score = 95.1 bits (104), Expect = 1e-14 Identities = 163/237 (69%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 176154 GAGTGTGCTGACGATCAGTATATTCTGGATGCTGCTGAGGAAGCAGGAGTTGAACTCAAC 176213 ||||| |||| ||| |||||||| || ||| ||||||||| || ||||| || Sbjct 368771 GAGTGCCCTGATGATGTTTATATTCTTGACGCTTTTGAGGAAGCTGGTGTTGATCTGCCA 368712 Query 176214 TACTCGTGCCGCGCTGGTGCCTGTTCGAGTTGTGCAGGAAAACTCATCTCGGGCACGGTA 176273 ||||| ||| | |||||| | || || |||||||| ||| | | | || || || Sbjct 368711 TACTCATGCAGGGCTGGTTCTTGCTCTTCCTGTGCAGGGAAAATTGTAGCAGGAACCTTA 368652 Query 176274 GATCAAAGCGATCAATCGTTCCTTGATGATGACCAGATCGATGCAGGTTTCATTCTGACT 176333 || || |||| |||||||| ||||||||||| || || |||| |||| ||| Sbjct 368651 GACCAGTCCGATGGGAGCTTCCTTGACGATGACCAGATAGAGGCTGGTTGGGTTCTCACT 368592 Query 176334 TGTGTTTCATATCCTACGAGCGATTGTGTGATTGAGACTGAGAAAGAAGAGGAACTT 176390 |||||| | | |||| | ||| ||| ||||||| | || |||| || ||| Sbjct 368591 TGTGTTGCTTTTCCTCAGTCTGATGTTGTCGTTGAGACACACAAGGAAGCTGAGCTT 368535 >seq251 Length=1467029 Score = 95.1 bits (104), Expect = 1e-14 Identities = 155/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 176172 TATATTCTGGATGCTGCTGAGGAAGCAGGAGTTGAACTCAACTACTCGTGCCGCGCTGGT 176231 || || || ||||| |||||| || |||||||| || ||| || ||| | ||||| Sbjct 530729 TACATCCTAGATGCGGCTGAGAGTGCTGGAGTTGAGCTACCCTATTCTTGCAGGGCTGGG 530670 Query 176232 GCCTGTTCGAGTTGTGCAGGAAAACTCATCTCGGGCACGGTAGATCAAAGCGATCAATCG 176291 || || || | |||||| || || | | || || | || |||||| ||| || Sbjct 530669 GCTTGCTCTACTTGTGCCGGGAAGATGGTGTCAGGTTCAGTTGATCAATCTGATGGTTCC 530610 Query 176292 TTCCTTGATGATGACCAGATCGATGCAGGTTTCATTCTGACTTGTGTTTCATATCCTACG 176351 ||||| ||||| | || || || | |||| | ||||||||||||||||| || || Sbjct 530609 TTCCTGGATGAGAATCAAATGGAGGGGGGTTATCTGCTGACTTGTGTTTCATACCCAACT 530550 Query 176352 AGCGATTGTGTGATTGAGACTGAGAAAGAAGAG-GAACTTT 176391 |||||||||||| | ||| | ||| |||| ||||||| Sbjct 530549 TCAGATTGTGTGATTCACACTCA-CAAGGAGAGTGAACTTT 530510 >seq1225 Length=211548 Score = 93.3 bits (102), Expect = 5e-14 Identities = 113/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 178277 AAGAGACCTACAACATCGTTGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACG 178336 |||| || || || || || ||||| ||| |||| || || || |||||||| |||| | Sbjct 11170 AAGAAACTTATAATATTGTAGCTGCACATAGTTATTTTGGCCGATTGATCTTCTAATATG 11111 Query 178337 CATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTA 178396 | ||||||||||| | ||| | | |||||| | || || |||| | | || |||| Sbjct 11110 CTAGTTTCAACAACTCTCATTCTTTATATTTCTTCTTAGCTGCTTGGCATATAGTGGGTA 11051 Query 178397 TCTGGTTCACTGCTCTTGGTGTTAGCACCATGGC 178430 | | ||||||||| | | | ||||||||||||| Sbjct 11050 TTTATTTCACTGCTTTAGTTATTAGCACCATGGC 11017 >seq1475 Length=110218 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 178322 TGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCGCAGCAT 178381 ||||||||||||| || ||||||||||| | || || |||| | | || | Sbjct 47113 TGATCTTCCAATATGCTAGTTTCAACAACTCTCTGTCTTCACATTTCTCTATATCTGCTT 47172 Query 178382 GGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCA 178441 ||||| | || ||||| ||||||| |||| | ||| ||||||| ||||| |||||||| | Sbjct 47173 GGCCTATAGTAGGTATTTGGTTCATTGCTTTAGGTATTAGCACTATGGCTTTCAACCTAA 47232 Query 178442 ACGGTTTCAACTTCAACCAGTCC 178464 | ||||| | |||||| | ||| Sbjct 47233 ATGGTTTTGATTTCAACTAATCC 47255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596251653984320