Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hibiscus_20syriacus_20[genbank_20GCA_5F001696755.1_202016-07-29]
77,488 sequences; 1,748,252,795 total letters
Query= NC_006884.2
Length=178249
Score E
Sequences producing significant alignments: (Bits) Value
seq5102 196 5e-45
seq3550 185 1e-41
seq31365 179 4e-40
seq9889 168 8e-37
seq15646 154 2e-32
seq695 132 5e-26
seq2693 118 1e-21
seq800 109 6e-19
seq369 100 3e-16
seq3386 93.3 5e-14
>seq5102
Length=101622
Score = 196 bits (216), Expect = 5e-45
Identities = 288/405 (71%), Gaps = 2/405 (0%)
Strand=Plus/Minus
Query 170666 TTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTGGTGTCTTA 170725
|| ||| | ||| |||| |||||| || || | ||| | || ||||||||||| ||
Sbjct 52337 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTG 52278
Query 170726 ATGATCCCATGTCTTCTA-ACTGCTGCTGCTTGTTTCATTGTAGCATTCATCGCTGCTCC 170784
|||||||| | ||| | || || || || || ||| | || ||||| ||||||||
Sbjct 52277 ATGATCCC-TACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATTGCTGCTCC 52219
Query 170785 TCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAA 170844
|||||| ||||| || || || | ||||| ||| | || ||| | | || || |||||
Sbjct 52218 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAA 52159
Query 170845 CATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCTATCCCAT 170904
|| || |||||||| | |||| |||| || ||||| || ||||| || || ||
Sbjct 52158 TATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCGAT 52099
Query 170905 CTGGGAAGCAGCCACTATGGACGAGTGGTTGTACAACGGAGGTCCTTACCAGTTAGTTAT 170964
||||||||| || | | || || ||||| ||||| || |||||||| ||||| || |
Sbjct 52098 CTGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGTTAATTGT 52039
Query 170965 TTTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACAG 171024
||| |||||| | |||| | || ||||||||| | |||||||||| | | |
Sbjct 52038 TTTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 51979
Query 171025 ACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGT 171069
|| || ||| | |||||||| ||| ||||| ||||| |||||
Sbjct 51978 TCTGGGTATGCGCCCTTGGATCGCTGTTGCATATTCAGCTCCTGT 51934
>seq3550
Length=137586
Score = 185 bits (204), Expect = 1e-41
Identities = 235/320 (73%), Gaps = 9/320 (3%)
Strand=Plus/Minus
Query 171333 TCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCGGTAGATTAA 171392
|||| ||||| |||||||| ||||| || || ||||||||||| || || || |||| |
Sbjct 93203 TCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGA 93144
Query 171393 TCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGCTGTATTCC 171452
|||| | |||||| |||||||| |||||||| ||||| |||||| | |||| | |
Sbjct 93143 TCTTTCGGTATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCTGCTTAGC 93084
Query 171453 CTGTAGTCTGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACG 171512
| ||||| || | ||||| || || | ||||| | || ||| | |||||||| || |
Sbjct 93083 CCGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACCATGACTTTCAACCTAAATG 93024
Query 171513 GATTCAACTTCAACCAATCAGTTGTAGATGCAAACGGAAAGATTGT---ACCAACA-TGG 171568
| ||||| || ||||||| |||||| || | | ||| | || | || | ||
Sbjct 93023 GTTTCAATTTTAACCAAT---TTGTAGTTG--ATAGTCAAGGTCGTGTAATTAATACCGG 92969
Query 171569 GGAGATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAAATGCACAC 171628
| ||| || ||||| || ||| |||| |||||||||||||||||| || || ||
Sbjct 92968 GCTGATATTATTAACCATGCTAACTTTGGTATGGAAGTTATGCATGAACTTAAGGCTCAT 92909
Query 171629 AACTTCCCACTAGACCTAGC 171648
|||||||| |||||||||||
Sbjct 92908 AACTTCCCTCTAGACCTAGC 92889
>seq31365
Length=1132
Score = 179 bits (198), Expect = 4e-40
Identities = 234/320 (73%), Gaps = 9/320 (3%)
Strand=Plus/Minus
Query 171333 TCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGATACTTCGGTAGATTAA 171392
|||| ||||| |||||||| ||||| || || ||||||||||| || || | |||| |
Sbjct 472 TCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGCCCGATTGA 413
Query 171393 TCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCTTCCTCGCTGTATTCC 171452
|||| | |||||| |||||||| |||||||| ||||| |||||| | |||| | |
Sbjct 412 TCTTTCGGTATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCTGCTTAGC 353
Query 171453 CTGTAGTCTGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACG 171512
| ||||| || | ||||| || || | ||||| | || ||| | |||||||| || |
Sbjct 352 CCGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACCATGACTTTCAACCTAAATG 293
Query 171513 GATTCAACTTCAACCAATCAGTTGTAGATGCAAACGGAAAGATTGT---ACCAACA-TGG 171568
| ||||| || ||||||| |||||| || | | ||| | || | || | ||
Sbjct 292 GTTTCAATTTTAACCAAT---TTGTAGTTG--ATAGTCAAGGTCGTGTAATTAATACCGG 238
Query 171569 GGAGATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAAGAAATGCACAC 171628
| ||| || ||||| || ||| |||| |||||||||||||||||| || || ||
Sbjct 237 GCTGATATTATTAACCATGCTAACTTTGGTATGGAAGTTATGCATGAACTTAAGGCTCAT 178
Query 171629 AACTTCCCACTAGACCTAGC 171648
|||||||| |||||||||||
Sbjct 177 AACTTCCCTCTAGACCTAGC 158
>seq9889
Length=72821
Score = 168 bits (186), Expect = 8e-37
Identities = 276/398 (69%), Gaps = 0/398 (0%)
Strand=Plus/Plus
Query 171795 TTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTGGT 171854
||||| || | ||||| |||||| || || |||||||| || | || ||||| ||
Sbjct 45036 TTTGATATTATGGATGACTGGTTACGTAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGC 45095
Query 171855 CTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTACTTTC 171914
|| || || || |||||||| || | || | || |||||||| ||| || || ||
Sbjct 45096 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTTACAGGTACAACCTTT 45155
Query 171915 GTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAACTTTTTA 171974
|| || || ||||| || ||||| | || || ||| | || || || || |||
Sbjct 45156 GTAACTTCGTGGTATACTCATGGATTGGCCAGTTCCTATTTGGAAGGCTGCAATTTCTTA 45215
Query 171975 ACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTATGGGGA 172034
|| || ||||| || || |||| | || | | | ||| | | ||||| ||||||||
Sbjct 45216 ACCGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTATGGGGT 45275
Query 172035 CCTGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTTGTA 172094
||||| |||||||||||| || || |||| ||||||||| || || |||| |||||
Sbjct 45276 CCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACATTTGTT 45335
Query 172095 GCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGCAGGA 172154
|| | || || | || ||||| |||||||| ||| | | || ||||| ||| ||
Sbjct 45336 GCTCTCCACGGCGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGTGCGA 45395
Query 172155 CTTGTTGGGATACGTCCTTACAACGCACTAGCATTCTC 172192
|||| | || ||||| || ||| | ||||||||
Sbjct 45396 TCTGTTCAATTGCGACCTTATAATGCAATCGCATTCTC 45433
>seq15646
Length=30608
Score = 154 bits (170), Expect = 2e-32
Identities = 252/363 (69%), Gaps = 0/363 (0%)
Strand=Plus/Minus
Query 171828 CGTTTCGTATTCATCGGATGGTCTGGTCTTTTACTTTTACCTTGTGCTTACCTAGCAATC 171887
|||||||| || | || ||||| || || || || || |||||||| || | || |
Sbjct 24407 CGTTTCGTTTTTGTAGGTTGGTCCGGCCTATTGCTCTTTCCTTGTGCCTATTTCGCTTTA 24348
Query 171888 GGAGGTTGGTTCGTAGGAACTACTTTCGTGACCTCATGGTACACACATGGTATTGCATCC 171947
|| |||||||| ||| || || || || || || ||||| || ||||| | ||
Sbjct 24347 GGGGGTTGGTTTACAGGTACAACCTTTGTAACTTCGTGGTATACTCATGGATTGGCCAGT 24288
Query 171948 TCATATCTTGAGGGAGCAAACTTTTTAACTGCAGCAGTATCAACACCTGGTGATGCTATG 172007
|| ||| | || || || || ||||| || ||||| || || |||| | || | |
Sbjct 24287 TCCTATTTGGAAGGCTGCAATTTCTTAACCGCCGCAGTTTCGACTCCTGCTAATAGTTTA 24228
Query 172008 GGTCATAGTCTATTGTTCCTATGGGGACCTGAGGCACAAGGAGATCTTGTACGATGGTTT 172067
| ||| | | ||||| |||||||| ||||| |||||||||||| || || |||| |
Sbjct 24227 GCGCATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGT 24168
Query 172068 CAATTAGGTGGACTATGGAACTTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTC 172127
|||||||| || || |||| ||||| || | || || | || ||||| ||||||||
Sbjct 24167 CAATTAGGCGGTCTGTGGACATTTGTTGCTCTCCACGGCGCTTTCGGACTAATAGGTTTT 24108
Query 172128 ATGCTTAGACAGTTTGAGATTGCAGGACTTGTTGGGATACGTCCTTACAACGCACTAGCA 172187
||| | | || ||||| |||| || |||| | || ||||| || ||| | |||
Sbjct 24107 ATGTTACGTCAATTTGAACTTGCGCGATCTGTTCAATTGCGACCTTATAATGCAATCGCA 24048
Query 172188 TTC 172190
|||
Sbjct 24047 TTC 24045
>seq695
Length=285002
Score = 132 bits (146), Expect = 5e-26
Identities = 306/454 (67%), Gaps = 9/454 (2%)
Strand=Plus/Minus
Query 170711 TGGTTTGGTGTCTTAATGATCCCATGTCTTCTA-ACTGCTGCTGCTTGTTTCATTGTAGC 170769
||||||| ||| ||||||||||| | ||| | || || || || || ||| | |
Sbjct 41099 TGGTTTGTTGTTTTAATGATCCC-TACCTTATTGACCGCAACTTTTTTATTTATTATCGT 41041
Query 170770 ATTCATCGCTGCTCCTCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTT 170829
|| || ||||||| || | | ||||| || || || | ||||| || | || ||| |
Sbjct 41040 CTTTATTGCTGCTCTTCTAATAGATATTGATGGTATTCGTGAACCTATTTCTGGATCTCT 40981
Query 170830 CTTATATGGTAACAACATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATT 170889
| || || ||||| || || ||||||| | ||| |||| | || || ||
Sbjct 40980 ACTTTACGGAAACAAAATTATTTCTGGTGTCATTATTCTTACTTCTGTAGTTATTGGTTT 40921
Query 170890 ACACTTCTATCCCATCTGGGAAGCAGCCACTATGGACGAGTGGTTGTACAACGGAGGTCC 170949
| ||| || | ||||||||||| || | | || || |||| ||||| || |||||
Sbjct 40920 GCTCTTTTACCAGATCTGGGAAGCGGCATCCGTTGATGAATGGTA-TACAATGGCGGTCC 40862
Query 170950 TTACCAGTTAGTTATTTTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTG 171009
||| ||||| || |||| |||||| | |||| | || ||||| ||| | |||
Sbjct 40861 TTATGAGTTAATTGTTTTACACTTCTTACTTGGTGTAGCTTGTTACATAGGTCGTGAGTT 40802
Query 171010 GGAACTATCATACAGACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGT 171069
|||||| | | ||||| ||| |||||||| | | ||||| ||| | ||| |
Sbjct 40801 GGAACTTAGTTTCCATCTAGGTATGCACCCTTGGATTGCTATTGCATATTCAACTCCTAT 40742
Query 171070 ATCTGCAGC-ATT--TGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGA 171126
|||||| | | | | || ||| | | |||||| ||||||| || || |||||
Sbjct 40741 ---TGCAGCTACTACTACTGTTTTCTTGATCTATCCAATCGGTCAAGGGAATTTTTCTGA 40685
Query 171127 TGGTATGCCACTAGGTATCTCAGGTACGTTCAAC 171160
||||||||| |||| ||||| | ||| ||||||
Sbjct 40684 TGGTATGCCTTTAGGAATCTCTGATACTTTCAAC 40651
>seq2693
Length=259752
Score = 118 bits (130), Expect = 1e-21
Identities = 468/729 (64%), Gaps = 33/729 (5%)
Strand=Plus/Minus
Query 172110 TTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGCAGGACTTGTTGGGATACGT 172169
|||||||| |||||||| ||| | | | ||||| |||| || || || | ||
Sbjct 245625 TTTGGACTAATAGGTTTTATGTTACGTAAATTTGAACTTGCGCGATTTCTTCAATTGCGA 245566
Query 172170 CCTTACAACGCACTAGCATTCTCAGCAGTTATTGCAGTATTCACGAGCATCT---TTCTA 172226
||||| || ||| | | |||||| | |||| || || | ||| ||||
Sbjct 245565 CCTTATAATGCAATCGTATTCTCTGGTCCAATTGTTGTTTTT----GTTTCTGTATTCTT 245510
Query 172227 A-TATATCCATTAGGTCAGCATAGTTGGTTCTTCGCACCTTCATTTGGTGTCGCAGCAAT 172285
| |||||| |||||||| | |||||||||| || || |||||||| ||||| ||
Sbjct 245509 GGTTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCCAATTTTGGTGTAGCAGCTAT 245450
Query 172286 CTTTCGTTATATTTTATTCATACAGGGTTTCCACAATATAACTCTTAATCCATTTCATAT 172345
||| | | || | || | || || || || ||| || ||||||||||||||
Sbjct 245449 ATTTAGATTCATCCTCTTTTTCCAAGGATTTCATAATTGGACATCGAATCCATTTCATAT 245390
Query 172346 GATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTGCCATACATGGTGCAACAGT 172405
|||||| || | || || | |||| || || ||||| || || |||| ||| || ||
Sbjct 245389 GATGGGAGTTGTCTGTGTATTGGGTGTGGCTTTGCTATGCGCTATTCATGATGCTACCGT 245330
Query 172406 ACAGAACACATTGTATGAAGACACATCACAATACACTGAAGGTAAGATTCAATCTACAAC 172465
| ||| || || | |||||| || | | | | ||| | ||
Sbjct 245329 AGAGATTACTTTATTTGAAGA---------------TG--GTGATGGTGCAA---ATAAA 245290
Query 172466 TTTCAGAGCATTCGATCCTACACAGGAAGAAGAAACTTATAGTATGATTACTGCTAACAG 172525
|||| | || || | || || || | |||||||||||| ||| | |||||| |
Sbjct 245289 TTTC-GTGCTTTTAACCCAACTCAAGCCGAAGAAACTTATTCAATGGTCGTCGCTAACCG 245231
Query 172526 ATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAAGATTCTTACACTTCCTTAT 172585
|| ||||| || || ||||| | ||||| || ||| | | ||||| ||| ||||
Sbjct 245230 CTTTTGGTCCCAAATCTTTGGGGT-TTTTTTTCCAATAAACGTTGGTTACATTTCTTTAT 245172
Query 172586 GTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATAGGTATCGTAGGTCTTGCACT 172645
||| || ||||| | ||| | | || || | || | || ||||| || ||
Sbjct 245171 GTTATTTGTACCAATAGCTGGTTTATAGATGAGTGCTCTTGGAGTAGTCGGTCTGGCTCT 245112
Query 172646 TAACCTCAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAAGA-CCCAGAGT 172704
||||| | | || ||||| || || || || || ||| |||| |||| | |
Sbjct 245111 GAACCTACGTGTCTATGACTTCGTTTCCCAGGAAATTTATGCAATGAAAGATCCCACA-T 245053
Query 172705 TTGAAACCTTCTACACTAAGAACATTCTTCTT-AATGAAGGTATGAGAGCATGGATGTCA 172763
|||| || ||||||| || || ||| || || || |||||||| || |||||| |
Sbjct 245052 TTGAGACTTTCTACATCAAAAATATTATTTTTAAACGAAGGTATTCCTGCTTGGATGGCG 244993
Query 172764 TCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAGAAGTCTTGCCACGAGGCAAC 172823
|| ||||| || ||||| || || | |||| || || || | || | || |||
Sbjct 244992 GCTCAAGATCAGCCTCATGAAAAACTTATATTCCTTGAGGAGGTTCTACCCTGTGGAAAC 244933
Query 172824 GCACTATAA 172832
|| || |||
Sbjct 244932 GCTCTTTAA 244924
>seq800
Length=269375
Score = 109 bits (120), Expect = 6e-19
Identities = 194/279 (70%), Gaps = 3/279 (1%)
Strand=Plus/Plus
Query 171912 TTCGTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAACTTT 171971
|| || || || ||||| || ||||| | || || ||| | || ||| || ||
Sbjct 152247 TTTGTAACTTCGTGGTATACTCATGGATTGGCCAGTTCCTATTTGGAAGGATGCAATTTC 152306
Query 171972 TTAACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTATGG 172031
||||| || |||| || || |||| | || | | | ||| | ||||||| ||||||
Sbjct 152307 TTAACCGCCACAGTTTCGACTCCTGCTAATAGTTTAGCACATTCTTTATTGTTACTATGG 152366
Query 172032 GGACCTGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTT 172091
|| ||||| |||||||||||| || || |||| |||||||||||| | |||| |||
Sbjct 152367 GGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTATGTGGACATTT 152426
Query 172092 GTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGA-CAGTTTGAGATTGC 172150
|| || || || || || ||||| |||||||| ||| ||| | || ||||| ||||
Sbjct 152427 GTTGC-TTCCACGGCACGTTAGGACTAATAGGTTTTATG-TTACATCAATTTGAACTTGC 152484
Query 172151 AGGACTTGTTGGGATACGTCCTTACAACGCACTAGCATT 172189
|| |||| | | ||||| || ||| | |||||
Sbjct 152485 GCGATCTGTTCAATTGTGACCTTATAATGCAATCGCATT 152523
Score = 104 bits (114), Expect = 3e-17
Identities = 155/219 (71%), Gaps = 1/219 (0%)
Strand=Plus/Plus
Query 171912 TTCGTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAACTTT 171971
|| || || || ||||| || ||||| | || || ||| | || ||| || ||
Sbjct 151333 TTTGTAACTTCGTGGTATACTCATGGATTGGCCAGTTCCTATTTGGAAGGATGCAATTTC 151392
Query 171972 TTAACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTATGG 172031
||||| || |||| || || |||| | || | | | ||| | ||||||| ||||||
Sbjct 151393 TTAACCGCCACAGTTTCGACTCCTGCTAATAGTTTAGCACATTCTTTATTGTTACTATGG 151452
Query 172032 GGACCTGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTTT 172091
|| ||||| |||||||||||| || || |||| |||||||||||| | |||| |||
Sbjct 151453 GGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTATGTGGACATTT 151512
Query 172092 GTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATG 172130
|| || || || || || ||||| |||||||| |||
Sbjct 151513 GTTGC-TTCCACGGCACGTTAGGACTAATAGGTTTTATG 151550
>seq369
Length=444201
Score = 100 bits (110), Expect = 3e-16
Identities = 186/273 (68%), Gaps = 0/273 (0%)
Strand=Plus/Plus
Query 172494 GAAGAAACTTATAGTATGATTACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCA 172553
|||||||||||| ||| | || |||||| | || ||||| || || ||| | | ||
Sbjct 342802 GAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTTGGGTTGCT 342861
Query 172554 TTTTCAAACAAAAGATTCTTACACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGG 172613
||||| | ||| | | ||||| ||| ||||||| || ||||| || | || | |||
Sbjct 342862 TTTTCCATTAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGCTTATGG 342921
Query 172614 ACATCATCTATAGGTATCGTAGGTCTTGCACTTAACCTCAGAGCATACGACTTTGTATCT 172673
| || | || | || ||||| || |||||||| | || | ||||| || ||
Sbjct 342922 ATGAGTGCTCTTGGAGTAGTTGGTCTGGCTCTTAACCTACGTGCCCATGACTTCGTTTCC 342981
Query 172674 CAAGAGATAAGAGCAGCAGAAGACCCAGAGTTTGAAACCTTCTACACTAAGAACATTCTT 172733
|| || || | ||||| ||||| | || ||| | || ||||||| || || ||| ||
Sbjct 342982 CAGGAAATCCGTGCAGCGGAAGATCTTGATTTTAAGACTGTCTACACCAAAAATATTGTT 343041
Query 172734 CTTAATGAAGGTATGAGAGCATGGATGTCATCT 172766
| || | ||||| | || |||||| | |||
Sbjct 343042 TTAAACTATGGTATTCGTGCTTGGATGGCGTCT 343074
>seq3386
Length=136654
Score = 93.3 bits (102), Expect = 5e-14
Identities = 353/552 (64%), Gaps = 28/552 (5%)
Strand=Plus/Minus
Query 170834 TATGGTAACAACATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACAC 170893
|| || |||| ||| || | |||||| | ||| |||| || || || || ||
Sbjct 67961 TACGGAAACA-CATTATTTTTGGTGCCATTATTCTGACTTCTGCAGCTATTGGTTTGCAT 67903
Query 170894 TTCTATCCCATCTGGGAAGCAGCCACTATGGACGAGTGGTTGTACAACGGAGGTCCTTAC 170953
|| || || |||| ||| | | | | ||||| ||||| | ||| || |||| |||
Sbjct 67902 TTTTACCCGATCTTAGAATCGACATCCGTTGACGAATGGTTATGCAATGGCGGTCTTTAT 67843
Query 170954 CAGTTAGTTATTTTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAA 171013
||||| || |||| |||||| | |||| | || || |||||| | |||
Sbjct 67842 GAGTTAATTGTTTTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCG----TGGT-- 67789
Query 171014 CTATCATACAGACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCT 171073
||||| ||| | |||||| ||| ||||| ||| | ||||| |
Sbjct 67788 ------------CTAGGTATGCGCTATTGGATCGCTGTTGCATATTCAACTCCTGTTGCA 67741
Query 171074 GCAGCATTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGG---TTCATTCTCTGATGGT 171130
|| || | || ||| | | |||||| ||| ||| || || || |||||||||
Sbjct 67740 GCTGCTACCACTGTTTTCTTAATCTATCCAATCGATCAAGGAAGTT--TTTTCTGATGGT 67683
Query 171131 ATGCCACTAGGTATCTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAAC 171190
|||| ||| | ||||| | ||| ||||| |||||| | || ||||| || |||| ||
Sbjct 67682 ATGCTCCTAAGAATCTCTGTTACTTTCAATTTCATGGTTGTATTCCAGGCTGAAC---AC 67626
Query 171191 ATACTAATGCACCCCTTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTC 171250
|| | |||||||| || || ||| | | |||| || | |||| || |||
Sbjct 67625 ATCTTTATGCACCCATTTCACATGTTAAGCATAGCTAGTGTATTCGACAACTCCCTATTC 67566
Query 171251 AGTGCAATGCACGGTTCTCTAGTGACATCTTCTCTAATCAGAGAGACAACTGAGAACGAG 171310
| || ||||| | |||| | || || ||| | | ||||| | || || | || ||
Sbjct 67565 AATGTTATGCATGATTCTTTGGTAACCTCTAGTTTGATCAGGAAAACCACAAAAAATGAA 67506
Query 171311 AGTCAAAACTACGGCTATAAGTTCGGACAAGA-AGAAGAAACATATAACATTGTTGCTGC 171369
| || | || || | ||| | ||||| ||| |||| ||||| || | |||||
Sbjct 67505 TTTATTAATGAAGGTTACAGATTCAGTCAAGAGGGAAAAAACTTATAATATCATAGCTGC 67446
Query 171370 TCATGGATACTT 171381
|||||| || ||
Sbjct 67445 TCATGGTTATTT 67434
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 569716437640320
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