Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hibiscus_20syriacus_20[genbank_20GCA_5F001696755.1_202016-07-29]
77,488 sequences; 1,748,252,795 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq2308 116 4e-21
seq6053 113 4e-20
seq3224 104 2e-17
seq3059 104 2e-17
seq1145 104 2e-17
seq8995 98.7 9e-16
seq10 98.7 9e-16
seq621 96.9 3e-15
seq287 95.1 1e-14
seq14711 93.3 4e-14
seq9595 93.3 4e-14
seq8977 93.3 4e-14
seq954 93.3 4e-14
seq5138 89.7 5e-13
seq12 87.8 2e-12
seq9733 86.0 6e-12
seq7924 86.0 6e-12
seq433 86.0 6e-12
seq10551 84.2 2e-11
seq12554 82.4 7e-11
seq5974 82.4 7e-11
>seq2308
Length=170619
Score = 116 bits (128), Expect = 4e-21
Identities = 156/216 (72%), Gaps = 1/216 (0%)
Strand=Plus/Minus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
||||||||| | || || ||||| | ||| || || | || || | || | |||||
Sbjct 73600 CAAAATGCAGATCTTCGTCAAAACCT-AACAGGGAAGACCATAACACTAGAGGTTGAATC 73542
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
||||||| ||| | |||||| |||||| ||||||||||| || || |||||
Sbjct 73541 TTCGGACACCAACGACAATGTCAAAGCTAAGATTCAGGACAAAGAAGGCATTCCACCCGA 73482
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944
|||||| | ||||||| || |||||| || |||||||||| | | | | ||||||
Sbjct 73481 CCAACAACGTCTCATTTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACCTTAGCCGACTA 73422
Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
||||| ||||| ||||| || |||| || |||||
Sbjct 73421 CAACATCCAAAAGGAATCAACCCTCCACCTCGTCCT 73386
>seq6053
Length=86585
Score = 113 bits (124), Expect = 4e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825
|| ||||| | ||||| || || | || || ||| | |||||| |||| | ||
Sbjct 17991 AAGATGCAGATCTTTGTGAAGACCCTCACCGGCAAAACAATCACCCTCGAGGTGGAGAGC 18050
Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885
||||||||||| | ||||| |||||| ||||| ||||| || |||||||||
Sbjct 18051 TCTGACACCATCGATAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATCCCTCCCGAT 18110
Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945
|| ||| || | || | || ||| || ||||| ||||| | | | | | || |||||||
Sbjct 18111 CAGCAACGATTGATCTTCGCCGGAAAGCAACTTGAAGACGGTCGTACCCTCGCCGACTAT 18170
Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
||||| || || || || ||| |||||||||||||
Sbjct 18171 AACATCCAGAAGGAGTCGACTCTCCATCTGGTCCT 18205
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || ||||| ||||| || || | || || | ||| | |||
Sbjct 18222 ATGCAGATCTTCGTCAAAACCTTAACCGGCAAGACTATAACTCTTGAAGTCGAAAGCTCG 18281
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||||||||| | ||||| |||||| ||||||||||| || ||||| || |||
Sbjct 18282 GACACCATCGATAACGTCAAGGCGAAGATTCAGGACAAAGAAGGCATCCCTCCGGACCAA 18341
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || | || | || |||||| ||||| ||||| | | | || || ||||||
Sbjct 18342 CAGCGATTGATCTTCGCCGGCAAGCAACTTGAAGACGGCCGTACTCTCGCTGATTATAAC 18401
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
||||| || ||||| || | |||||||||||
Sbjct 18402 ATTCAGAAGGAATCGACACTACATCTGGTCCT 18433
>seq3224
Length=148195
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | |||||||||||| | |||||||| |||||||| | || | ||| |
Sbjct 66371 ATGCAGATCTTTGTAAAAACACTTACTGGAAAGACGATCACCCTTGAGGTGGAAAGCTCC 66430
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| ||||| | ||||| ||||| ||||| |||||||| ||||| || |||
Sbjct 66431 GACACAATCGATAATGTCAAGGCCAAGATCCAAGACAAGGAAGGGATTCCTCCAGACCAA 66490
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || || |||| | || ||||| || || |||| | | | | ||||| |||
Sbjct 66491 CAGAGGCTTATTTTTGCTGGAAAACAGCTTGAGGATGGCCGCACCCTTGCTGACTACAAC 66550
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|| ||||| || ||||| |||| || |||||
Sbjct 66551 ATCCAAAAGGAGTCTACCCTCCACCTTGTCCT 66582
>seq3059
Length=143113
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || ||||| | || || || | ||||| | ||| | ||| |
Sbjct 2204 ATGCAGATATTCGTGAAAACCCTGACCGGCAAGACTATCACTCTTGAAGTCGAAAGCTCC 2145
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| || | |||||| |||||| || |||||||| || ||||| |||||
Sbjct 2144 GACACCATAGATAATGTCAAAGCTAAGATTCAAGATAAAGAAGGCATCCCTCCGGATCAG 2085
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || | || | | |||||||||||| || |||| | | | | | ||| || ||
Sbjct 2084 CAGCGATTGATCTTTGCCGGCAAACAACTGGAGGATGGTCGCACCTTGGCCGATTACAAT 2025
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|| ||||| ||||| ||| ||||||||||||| || ||| | || ||
Sbjct 2024 ATCCAAAAGGAATCGACTCTCCATCTGGTCCTCAGGCTTCGTGGCGG 1978
Score = 98.7 bits (108), Expect = 9e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || ||||| | ||||| || | ||||| | ||| | ||| |
Sbjct 2660 ATGCAGATCTTCGTTAAAACCCTGACTGGCAAGACTATCACTCTTGAAGTGGAAAGCTCC 2601
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| || || | ||||| |||||| |||||||||||||| ||||| || ||
Sbjct 2600 GACACAATTGATAATGTCAAGGCTAAGATTCAAGACAAAGAAGGGATTCCTCCGGACCAG 2541
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || | |||| || ||| || || || ||||||| || | | || |||||||||
Sbjct 2540 CAGAGGTTGATTTTCGCCGGGAAGCAGCTGGAAGATGGAAGGACCCTCGCCGACTATAAT 2481
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|| || || || || ||| | |||||||||||
Sbjct 2480 ATCCAGAAGGAGTCAACTCTTCATCTGGTCCT 2449
Score = 87.8 bits (96), Expect = 2e-12
Identities = 151/218 (69%), Gaps = 6/218 (3%)
Strand=Plus/Minus
Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAA--- 26822
|| ||||| | ||||| || || | || |||||| | |||||| | || | |||
Sbjct 2891 AAGATGCAGATCTTTGTGAAGACCCTCACCGGAAAAACAATCACCCTAGAGGTTGAAAGC 2832
Query 26823 TCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCC 26882
||| ||||| || || | ||||| |||||| || |||||||| || |||
Sbjct 2831 TCA---GACACTATAGATAATGTCAAGGCCAAGATTCAAGATAAAGAAGGCATTCCTGTG 2775
Query 26883 GATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGAC 26942
|| || || || | || | || ||| || || || ||||||| || | | || ||||
Sbjct 2774 GACCAGCAGCGATTGATCTTCGCCGGGAAGCAGCTGGAAGATGGAAGGACCCTCGCCGAC 2715
Query 26943 TATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
||||| || ||||| ||||| ||| | |||||||||||
Sbjct 2714 TATAATATCCAAAAGGAATCGACTCTTCATCTGGTCCT 2677
Score = 84.2 bits (92), Expect = 2e-11
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | ||||| ||||| || || |||||| | || ||| |||| | ||
Sbjct 1976 ATGCAGATATTTGTCAAAACCTTGACGGGAAAAACAATTACCCTCGAGGTGGAGAGCTCG 1917
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| || ||||| | || || || ||| || ||||||||||| ||||| ||||||
Sbjct 1916 GATACGATCGACAACGTGAAGGCTAAAATTCAGGATAAAGAAGGGATCCCTCCGGATCAA 1857
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATA-GAAACGT-CAGCGACTATA 26946
|| || | || | || |||||| || || || || | | || || | || || || |
Sbjct 1856 CAGAGGTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCAGGACACTTGCA--GATTACA 1799
Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
| || || ||||| |||||| |||| || || ||||| ||| | |||||
Sbjct 1798 ATATCCAGAAAGAGTCTACTCTCCACCTTGTGCTGAGGCTTCGTGGAGG 1750
>seq1145
Length=230503
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825
|| ||||| | || || ||||| |||| || || | || ||| | || | |||||
Sbjct 12641 AATATGCAGATCTTCGTCAAAACCCTAACGGGGAAGACCATAACCCTAGAGGTTGAATCC 12700
Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885
|||||||||||| | ||||| |||||| ||||||||||| || || |||||
Sbjct 12701 TCCGACACCATCGACAATGTCAAGGCCAAGATTCAGGACAAAGAAGGCATCCCACCCGAC 12760
Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945
|| ||| | ||||| | || |||||| || |||||||| | | | | | ||||||
Sbjct 12761 CAGCAACGCCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGCACCTTAGCCGACTAC 12820
Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
||||| || || ||||| || |||| || |||||
Sbjct 12821 AACATCCAGAAGGAATCCACCCTCCACCTCGTCCT 12855
>seq8995
Length=56531
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | ||||| ||||| |||| | || | ||||| |||| | ||| |
Sbjct 47640 ATGCAGATCTTTGTTAAAACCCTAACCTGCAAGACTATCACTCTCGATGTCGAAAGCTCC 47699
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| || | |||||| |||||| || |||||||| || |||| |||||
Sbjct 47700 GACACCATAGATAATGTCAAAGCTAAGATTCAAGATAAAGAAGGCATCCCTCAGGATCAG 47759
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || | || | || ||| ||||||||||| |||| | | | | || || ||
Sbjct 47760 CAGCGATTGATCTTCGCCGGAAAACAACTCGAGGATGGCCGCACCTTGGCGGATTACAAT 47819
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|| ||||| ||||| ||| ||||||||||||| || ||| | || ||
Sbjct 47820 ATCCAAAAGGAATCGACTCTCCATCTGGTCCTCAGGCTTCGTGGCGG 47866
Score = 91.5 bits (100), Expect = 1e-13
Identities = 154/219 (70%), Gaps = 8/219 (4%)
Strand=Plus/Plus
Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAA--- 26822
|| ||||| | ||||| || || | || |||||| | |||||| |||| | |||
Sbjct 47181 AATATGCAGATCTTTGTGAAGACCCTCACCGGAAAAACAATCACCCTCGAGGTGGAAAGC 47240
Query 26823 TCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCC 26882
||| ||||||||||| | || || |||||| || |||||||| || |||||
Sbjct 47241 TCA---GACACCATCGATAATGTTAAGGCCAAGATTCAAGATAAAGAAGGCATCCCTCCG 47297
Query 26883 GATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GA 26941
|| || || || | || | || ||| ||||| || || |||| | | || | || ||
Sbjct 47298 GACCAGCAGCGATTGATCTTCGCCGGAAAACAGCTTGAGGATGGTCG-CACATTGGCGGA 47356
Query 26942 CTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|| ||||| || || ||||| ||| |||||||||||||
Sbjct 47357 TTACAACATCCAGAAGGAATCGACTCTCCATCTGGTCCT 47395
>seq10
Length=577822
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || ||||| || || || ||| | || ||| |||| | || |
Sbjct 543187 ATGCAAATCTTCGTCAAAACCTTGACCGGCAAAACCATAACCCTCGAGGTCGAGAGTTCC 543128
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||||||||| | || || || ||| ||||||||||| || || ||||| ||
Sbjct 543127 GACACCATCGACAACGTTAAGGCCAAAATTCAAGACAAAGAAGGCATCCCACCCGACCAG 543068
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
||| | ||||| | || ||||||||| || ||||| | | | | | || |||||
Sbjct 543067 CAACGCCTCATCTTCGCCGGCAAACAGCTGGAAGACGGCCGTACCTTGGCGGATTATAAT 543008
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997
|| || || ||||| ||| | || || || ||||| ||| | |||||||
Sbjct 543007 ATCCAGAAGGAATCGACTCTTCACCTTGTTCTGAGGCTTCGTGGAGGAA 542959
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825
|| ||||| | ||||| ||||| | || || || | || ||| |||| | ||
Sbjct 562407 AATATGCAGATCTTTGTGAAAACCCTCACCGGCAAGACCATAACCCTCGAGGTCGAGAGT 562348
Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885
|||||||||||| | ||||| || ||| ||||||||||| || || |||||
Sbjct 562347 TCCGACACCATCGACAACGTCAAGGCCAAAATTCAAGACAAAGAAGGCATCCCACCCGAC 562288
Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945
|| ||| | ||||| | || ||||||||| || ||||| | | | | | || |||
Sbjct 562287 CAGCAACGCCTCATCTTCGCCGGCAAACAGCTGGAAGACGGCCGTACCTTGGCGGATTAT 562228
Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997
|| || || || ||||| ||| | || || || ||||| ||| | |||||||
Sbjct 562227 AATATCCAGAAGGAATCGACTCTTCACCTTGTTCTGAGGCTTCGTGGAGGAA 562176
>seq621
Length=294110
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/215 (70%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAA---TCA 26825
||||| | || || ||||| || || || || | || || | ||| | ||| |||
Sbjct 255381 ATGCAGATCTTCGTCAAAACCTTGACCGGCAAGACTATAACACTTGAAGTCGAAAGCTCA 255440
Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885
|||||||| || | ||||| |||||| ||||| ||||| |||||||| ||
Sbjct 255441 ---GACACCATAGATAACGTCAAGGCCAAGATTCAGGACAAGGAAGGCATACCTCCGGAC 255497
Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945
||||| || | || | || ||| || || |||||||| | | | || |||||||
Sbjct 255498 CAACAGCGATTGATCTTCGCCGGGAAGCAGCTCGAAGACGGCCGTACTCTCGCCGACTAT 255557
Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|||||||| ||||| || || |||||||||||||
Sbjct 255558 AACATTCAGAAAGAGTCGACACTCCATCTGGTCCT 255592
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825
|| ||||| | |||||||| || | || |||||| | || ||| |||| | ||
Sbjct 255150 AAGATGCAGATCTTTGTAAAGACCCTCACCGGAAAAACAATAACCCTCGAGGTGGAGAGC 255209
Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885
|||||||||||| | || || ||||| ||||| ||||| || ||||| ||
Sbjct 255210 TCCGACACCATCGATAACGTTAAGGCCAAGATCCAGGACAAGGAAGGTATCCCTCCGGAC 255269
Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945
|| || | | || | || |||||| ||||||||||| | | | || |||||||
Sbjct 255270 CAGCAGCGTTTGATCTTCGCCGGCAAGCAACTCGAAGACGGCCGTACTCTCGCCGACTAT 255329
Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
||||| || || || || ||| |||||||||||||
Sbjct 255330 AACATCCAGAAGGAGTCGACTCTCCATCTGGTCCT 255364
>seq287
Length=655510
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825
|| ||||| | || || ||||| |||| || || | || ||| | || | || ||
Sbjct 103849 AAGATGCAGATCTTCGTCAAAACCCTAACGGGGAAGACCATAACCCTAGAGGTTGAGTCT 103908
Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885
|||||||||||| | ||||| |||||| ||||||||||| || || || ||
Sbjct 103909 TCCGACACCATCGACAATGTCAAGGCTAAGATTCAGGACAAAGAAGGCATCCCACCAGAC 103968
Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945
|| ||| | ||||| | || |||||| || |||||||||| | | | | | ||||||
Sbjct 103969 CAGCAACGTCTCATCTTCGCCGGCAAGCAGCTCGAAGATGGTCGCACCTTAGCCGACTAC 104028
Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
||||| || || || || || | || || |||||
Sbjct 104029 AACATCCAGAAGGAGTCCACCCTTCACCTCGTCCT 104063
>seq14711
Length=21231
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATT--AGAATCAA 26826
|||||| | ||||| || || | |||||||| | || ||| | || | ||| | |
Sbjct 4841 ATGCAAATCTTTGTCAAGACTCTTACTGGAAAGACAATTACCTTGGAGGTTGAGAGTTCA 4900
Query 26827 ACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATC 26886
|| ||||| || | || ||| || ||| ||||||||||| || || || || |
Sbjct 4901 --GATACCATTGATAATGTGAAAGCCAAAATTCAGGACAAAGAAGGAATTCCACCAGACC 4958
Query 26887 AACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATA 26946
|||||||| | |||| | || ||||| || ||||||| |||| | ||| ||||
Sbjct 4959 AACAAAGATTGATTTTTGCAGGAAAACAGCTTGAAGATGGAAGAACTCTTGCCGATTATA 5018
Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
| || ||||| || |||||| ||||| |||| || | ||| | |||||
Sbjct 5019 ATATCCAAAAGGAGTCTACTCTCCATTTGGTTCTCCGCCTTCGTGGAGG 5067
>seq9595
Length=52040
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
||| ||||| | || || ||||| | || || || | || ||| | || | || ||
Sbjct 11063 CAAGATGCAGATCTTCGTCAAAACTCTGACGGGGAAGACCATAACCCTAGAGGTCGAGTC 11122
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
|||||||||||| | |||||| |||||| ||||||||||| || || || ||
Sbjct 11123 TTCCGACACCATCGACAATGTCAAAGCTAAGATTCAAGACAAAGAAGGAATTCCACCTGA 11182
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944
|||||| | ||||| | || ||| || || || || || | | | | | ||||||
Sbjct 11183 CCAACAACGCCTCATCTTCGCCGGGAAGCAGCTGGAGGACGGCCGCACCTTAGCCGACTA 11242
Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
||||| || || ||||| ||| |||| || |||||
Sbjct 11243 CAACATCCAGAAGGAATCCACTCTCCACCTTGTCCT 11278
>seq8977
Length=60439
Score = 93.3 bits (102), Expect = 4e-14
Identities = 157/225 (70%), Gaps = 2/225 (1%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | ||||| ||||| | ||||| || | || ||| |||| | ||
Sbjct 30355 ATGCAAATCTTTGTCAAAACCCTGACTGGGAAGACTATTACCCTCGAGGTTGAGAGTTCT 30296
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||||||||| | || || ||||||| ||| | ||| |||| || || |||||
Sbjct 30295 GACACCATCGACAACGTAAAGGCAAAGATTCAAGACTAGGAAAGGATCCCACCTGATCAG 30236
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947
||||| || |||| | || ||||| || ||||||| | | | | ||| || || ||
Sbjct 30235 CAAAGGCTTATTTTTGCTGGAAAACAGCTGGAAGATGGCCGTACCCT-AGCTGATTACAA 30177
Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGG 26992
||||||||| |||||||| |||| || || || | ||| ||||
Sbjct 30176 CATTCAAAAGGAATCTACCCTCCACCTAGTGCTCCGCCTTCGAGG 30132
Score = 84.2 bits (92), Expect = 2e-11
Identities = 121/168 (72%), Gaps = 2/168 (1%)
Strand=Plus/Minus
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| || || | ||||| ||||| ||||| |||||||| || || |||||
Sbjct 30751 GACACTATTGATAATGTCAAGTCTAAGATCCAAGACAAGGAAGGGATCCCACCAGATCAG 30692
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947
||||| ||||| | | |||||| |||| ||||||| ||| | | ||| ||||||||
Sbjct 30691 CAAAGGCTCATCTTTGCTGGCAAATAACTTGAAGATGGTAGTACACT-AGCTGACTATAA 30633
Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||| || || ||||| ||| | || |||| || ||||| | || ||
Sbjct 30632 CATCCAGAAGGAATCCACTCTTCACTTGGTTCTTCGACTTCGTGGTGG 30585
Score = 82.4 bits (90), Expect = 7e-11
Identities = 150/214 (70%), Gaps = 8/214 (4%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGA-ATT-AGAATCAA 26826
|||||| | ||||| || || | |||||||| || |||| | || ||| ||| | |
Sbjct 30127 ATGCAAATATTTGTCAAGACTCTCACTGGAAA---GA-CACCTTGGAGATTGAGAGTTCA 30072
Query 26827 ACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATC 26886
|| | ||| || | || ||| || ||| ||||||||||| || || || ||||
Sbjct 30071 --GATATCATTGATAATGTGAAAGCCAAAATTCAGGACAAAGAAGGAATCCCACCAGATC 30014
Query 26887 AACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATA 26946
|||||||| | |||| | || ||||| || ||||||| |||| | ||| ||||
Sbjct 30013 AACAAAGATTGATTTTTGCAGGAAAACAGCTTGAAGATGGAAGAACTCTGGCCGATTATA 29954
Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
| || ||||| || ||||| ||||| |||| ||
Sbjct 29953 ATATCCAAAAGGAGTCTACCCTCCATTTGGTTCT 29920
>seq954
Length=247624
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
||| ||||| | || || ||||| || || || || | || ||| | || | || ||
Sbjct 150763 CAAGATGCAGATCTTCGTCAAAACCTTGACGGGGAAGACCATAACCCTAGAGGTCGAGTC 150822
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
||||||||||| | |||||| |||||| ||||||||||| || || || ||
Sbjct 150823 TTCGGACACCATCGACAATGTCAAAGCTAAGATTCAAGACAAAGAAGGAATTCCACCTGA 150882
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944
|||||| | ||||| | || ||| || || || || || | | | | | ||||||
Sbjct 150883 CCAACAACGCCTCATCTTCGCCGGGAAGCAGCTGGAGGACGGCCGCACCTTAGCCGACTA 150942
Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
||||| || || ||||| ||| |||| || |||||
Sbjct 150943 CAACATCCAGAAGGAATCCACTCTCCACCTTGTCCT 150978
>seq5138
Length=101594
Score = 89.7 bits (98), Expect = 5e-13
Identities = 111/152 (73%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||||||||| | |||||| |||||| ||||||||||| || || || || |||
Sbjct 53566 GACACCATCGACAATGTCAAATCCAAGATTCAGGACAAAGAAGGCATTCCACCTGACCAA 53507
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
||| | ||||| | | ||| || || ||||| |||| | | | | |||||| |||
Sbjct 53506 CAACGCCTCATCTTTGCCGGGAAGCAGCTCGAGGATGGCCGCACCTTAGCCGACTACAAC 53447
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|| || || ||||||||| |||| || || ||
Sbjct 53446 ATCCAGAAGGAATCTACTCTCCACCTCGTTCT 53415
>seq12
Length=832314
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
||| ||||| | || || ||||| |||| || || | || ||| | || | | ||
Sbjct 368080 CAAGATGCAGATCTTCGTCAAAACCCTAACGGGGAAGACCATAACCCTAGAGGTCTAGTC 368021
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
|||||||||||| | |||||| ||||| ||||| ||||| || || || ||
Sbjct 368020 CTCCGACACCATCGACAATGTCAAAGCCAAGATCCAAGACAAGGAAGGCATCCCACCGGA 367961
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAG-CGACT 26943
|||||| | ||||| | | |||||| || ||||| |||| | |||| || ||| |
Sbjct 367960 CCAACAACGCCTCATCTTCTCCGGCAAGCAGCTCGAGGATGGCCG-GACGTTAGCCGATT 367902
Query 26944 ATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
| ||||| || || ||||| || | || || ||||| | || ||||| ||
Sbjct 367901 ACAACATCCAGAAGGAATCCACGCTTCACCTCGTCCTCCGTCTAAGAGGCGG 367850
>seq9733
Length=51005
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || ||||| | || |||||| | |||||| | ||| | || |
Sbjct 37425 ATGCAAATCTTCGTGAAAACCCTGACCGGAAAAACCATCACCTTGGAAGTCGAGAGCTCC 37366
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||||||||| | ||||| || || ||||| ||||| || || || || ||
Sbjct 37365 GACACCATCGACAACGTCAAGGCCAAAATCCAAGACAAGGAAGGTATCCCACCGGACCAG 37306
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || ||||| | || ||| || ||||| || || | | ||| | |||||| |||
Sbjct 37305 CAGAGGCTCATCTTCGCCGGGAAGCAACTTGAGGACGGTCGAACTTTGGCCGACTACAAC 37246
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|| ||||| || || || | ||| |||| |||| ||| | || ||
Sbjct 37245 ATCCAAAAGGAGTCGACCCTTCATTTGGTTTTGAGGCTTCGTGGCGG 37199
>seq7924
Length=66600
Score = 86.0 bits (94), Expect = 6e-12
Identities = 143/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837
|| || ||||| |||| || || | || ||| | || | || || ||||||||||
Sbjct 33223 TTCGTCAAAACCCTAACGGGGAAGACCATAACCCTAGAGGTCGAGTCCTCCGACACCATC 33164
Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897
|| | | ||| ||||| ||||| ||||| ||||| || || |||||| | |||
Sbjct 33163 GACAATGCCAAGGCCAAGATCCATGACAAGGAAGGCATACCACCGGACCAACAACGCCTC 33104
Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAACATTCAAAA 26956
|| | || |||||| || ||||| |||| | || | ||| || || ||||| || ||
Sbjct 33103 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCG-GACCTTAGCGGATTACAACATACAGAA 33045
Query 26957 AGAATCTACTATCCATCTGGTCCT 26980
||||||||| | || || |||||
Sbjct 33044 GGAATCTACTCTTCACCTCGTCCT 33021
>seq433
Length=331005
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || ||||| | || |||||| | || || | ||| | || |
Sbjct 36593 ATGCAGATCTTCGTCAAAACTCTCACCGGAAAAACCATAACTTTGGAAGTTGAGAGCTCC 36652
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| ||||| | ||||| ||||| ||||| |||||||| || || || ||
Sbjct 36653 GACACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGGATTCCACCGGACCAG 36712
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || ||||| | || || ||||| |||||||| | | | | | ||| ||||||
Sbjct 36713 CAGAGGCTCATCTTCGCTGGAAAACAGCTCGAAGACGGCCGGACCTTGGCCGATTATAAC 36772
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| || ||||| || | |||||||| |||| ||| | || ||
Sbjct 36773 ATTCAGAAGGAATCGACCCTTCATCTGGTTTTGAGGCTTCGTGGTGG 36819
>seq10551
Length=45279
Score = 84.2 bits (92), Expect = 2e-11
Identities = 149/214 (70%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | ||||| ||||| | ||||| || | |||||| |||| | |||
Sbjct 34129 ATGCAGATCTTTGTGAAAACTCTTACTGGTAAGACAATCACCCTCGAGGTTGAAAGCTCG 34188
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| || || | ||||| ||||| || || |||||||| ||||| || |||
Sbjct 34189 GACACAATTGATAATGTCAAGGCCAAGATCCAGGATAAGGAAGGGATCCCTCCTGACCAA 34248
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG-AAACGTCAGC-GACTATA 26946
|| || || || | | |||||||||||||| |||| | | || | || || || |
Sbjct 34249 CAGAGGCTTATCTTTGCTGGCAAACAACTCGAGGATGGCCGTACACTT--GCTGATTACA 34306
Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|||| ||||| || ||||| ||||||| |||||
Sbjct 34307 ACATCCAAAAGGAGTCTACCCTCCATCTTGTCCT 34340
>seq12554
Length=32302
Score = 82.4 bits (90), Expect = 7e-11
Identities = 148/215 (69%), Gaps = 1/215 (0%)
Strand=Plus/Minus
Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825
|| |||||| | || || ||||| |||| || || | || ||| | || | || ||
Sbjct 15393 AAGATGCAAATCTTCGTCAAAACCCTAACGGGTAAGACCATAACCCTAGAGGTTGAGTCT 15334
Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885
|||||| ||||| | ||||| |||||| ||||||||||| || || || ||
Sbjct 15333 TCCGACACTATCGACAATGTCAAGGCTAAGATTCAGGACAAAGAAGGCATCCCACCGGAC 15274
Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945
|| ||| | || || | || ||| || || |||||||| | | | | | ||||||
Sbjct 15273 CAGCAACGCCTTATCTTCGCCGGAAAGCAGCTCGAAGACG-GCGCACCTTAGCCGACTAC 15215
Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
||||| || ||||| || || |||| || |||||
Sbjct 15214 AACATCCAGAAAGAGTCCACACTCCACCTAGTCCT 15180
>seq5974
Length=88138
Score = 82.4 bits (90), Expect = 7e-11
Identities = 167/248 (67%), Gaps = 0/248 (0%)
Strand=Plus/Minus
Query 26750 TACTTTTTAGTCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCAC 26809
|| |||| | |||| | |||||| | || || |||||| | ||||| || | |||||
Sbjct 73115 TAATTTTGATTCAATATAGATGCAAATTTTCGTTAAAACACTCACTGGTAAGACCATCAC 73056
Query 26810 CATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGA 26869
| |||| | ||| || |||||||| | || || |||||| ||||| ||
Sbjct 73055 CCTCGAGGTGGAAAGTTCTGATACCATCGACAATGTAAAGGCCAAGATTCAAGACAAGGA 72996
Query 26870 AGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG 26929
||| || || || || ||||| ||| | || | | || ||||| || || |||| |
Sbjct 72995 AGGAATCCCACCAGACCAACAGAGATTGATCTTTGCTGGTAAACAGCTGGAGGATGGCCG 72936
Query 26930 AAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAG 26989
| | |||||||||||| || || ||||| || |||| ||||||| | | ||
Sbjct 72935 TACTCTTGCCGACTATAACATCCAGAAGGAATCCACACTCCACTTGGTCCTTCGTTTGAG 72876
Query 26990 AGGAGGAA 26997
||| ||||
Sbjct 72875 AGGTGGAA 72868
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478198767599360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |