Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hibiscus_20syriacus_20[genbank_20GCA_5F001696755.1_202016-07-29] 77,488 sequences; 1,748,252,795 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq9751 93.3 5e-14 >seq9751 Length=50749 Score = 93.3 bits (102), Expect = 5e-14 Identities = 182/264 (69%), Gaps = 9/264 (3%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||||||||||||||| || || || | || || ||||| | ||| ||||| | ||| Sbjct 49304 GTGGAGACCCTCGTCTCGCGATATTAACTCGTTTGAGAAAGTTAATCCGGGCATTAAACC 49245 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 ||||| ||||||||||| || || || || || ||||| ||||| ||||| || || Sbjct 49244 GCGCTTTTTCAACCAGAATATGGCGCAGAAACTTCCGGAGAAAAAGATCCCCTCGACGCA 49185 Query 126178 CGCGAACGCAAAGAGACGCTCAGC-AAAGGAGCGCGACTTTGTGTCAAACCACTTCATCG 126236 || || || | | ||||| || |||| | | | || | ||| ||||| | Sbjct 49184 AGCAAAGGCGATCAACCGCTCGGCGAAAGTTTCTC----CTCCGTTGATCCATTTCATGG 49129 Query 126237 CCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCT 126296 |||||| |||||||| | | |||||| || || | || || |||||| ||| Sbjct 49128 CCCACTCGGCCTTTTTAGCCACACACGGCACCGTTTCAATGGCGCGGAAGAGTCGGCTCT 49069 Query 126297 TTTCTGAT-GGA-TCTTTGATGTA 126318 |||| || ||| || |||||||| Sbjct 49068 TTTC--ATCGGAGTCCTTGATGTA 49047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596775003303040