Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hibiscus_20syriacus_20[genbank_20GCA_5F001696755.1_202016-07-29] 77,488 sequences; 1,748,252,795 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq9751 87.8 2e-12 >seq9751 Length=50749 Score = 87.8 bits (96), Expect = 2e-12 Identities = 182/264 (69%), Gaps = 9/264 (3%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||||||||||||||| || || || | || || ||||| | || ||||| | ||| Sbjct 49304 GTGGAGACCCTCGTCTCGCGATATTAACTCGTTTGAGAAAGTTAATCCGGGCATTAAACC 49245 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 ||||| ||||||||||| || || || || || ||||| ||||||||||| || || Sbjct 49244 GCGCTTTTTCAACCAGAATATGGCGCAGAAACTTCCGGAGAAAAAGATCCCCTCGACGCA 49185 Query 127651 CGCGAACGCAAATAGACGCTCGGC-AAAGGAGCGGGACTTTGTATCAAACCACTTCATCG 127709 || || || | | |||||||| |||| | || | | | ||| ||||| | Sbjct 49184 AGCAAAGGCGATCAACCGCTCGGCGAAAGTTTC--TCCTCCG--TTGATCCATTTCATGG 49129 Query 127710 CCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCT 127769 |||||| |||||||| | | ||| || || || | || || |||||| ||| Sbjct 49128 CCCACTCGGCCTTTTTAGCCACACACGGCACCGTTTCAATGGCGCGGAAGAGTCGGCTCT 49069 Query 127770 TTTCTGAT-GGA-TCTTTGATGTA 127791 |||| || ||| || |||||||| Sbjct 49068 TTTC--ATCGGAGTCCTTGATGTA 49047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 612912956926080