Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hibiscus_20syriacus_20[genbank_20GCA_5F001696755.1_202016-07-29]
77,488 sequences; 1,748,252,795 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq1278 122 6e-23
seq3059 118 7e-22
seq9733 116 3e-21
seq3967 113 3e-20
seq6053 111 1e-19
seq11709 107 1e-18
seq2335 105 5e-18
seq8995 104 2e-17
seq1833 104 2e-17
seq7474 95.1 8e-15
seq433 95.1 8e-15
seq621 93.3 3e-14
seq10551 89.7 4e-13
seq14711 84.2 2e-11
seq6038 84.2 2e-11
seq226 84.2 2e-11
seq10 84.2 2e-11
>seq1278
Length=225562
Score = 122 bits (134), Expect = 6e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || || | ||||| || | || | |||| ||| ||||||||||| ||||| |||
Sbjct 158074 CCACCACGAAGACGCAAGACAAGGTGAAGAGTGGATTCCTTTTGTATATTGTAATCAGCC 158015
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
||| | | |||| |||||||||||||| | ||||| || | |||||| || | |||
Sbjct 158014 AAAGTCCTTCCATCTTCCAATTGTTTCCCAGCGAAAATCAACCTCTGCTGGTCTGGGGGA 157955
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| ||||||||||| || || || | | | | || || | || |||||
Sbjct 157954 ATCCCTTCTTTGTCCTGAATCTTCGCCTTGACATTATCAATCGTATCAGAACTCTCCACC 157895
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|||| |||||| ||||| || || |||||||| ||||||||||||||
Sbjct 157894 TCCAGAGTAATGGTTTTCCCGGTCAAAGTTTTGACGAAGATCTGCAT 157848
Score = 82.4 bits (90), Expect = 5e-11
Identities = 161/234 (69%), Gaps = 3/234 (1%)
Strand=Plus/Minus
Query 39488 CATCGCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAAT 39547
|||| ||||| || | | || |||||||| | || || ||||| || || ||||
Sbjct 157850 CATC-CCGCCACGAAGCCTCAAAACCAAATGAAGGGTCGACTCCTTTTGGATGTTGTAAT 157792
Query 39548 CGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCG 39607
||||||| || | || || | ||||| ||| | || || | ||| ||||| ||||
Sbjct 157791 CGGCCAAGGTACGACCGTCCTCGAGCTGTTTTCCGGCGAAGATGAGACGTTGCTGGTCCG 157732
Query 39608 AGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCG-CTACTGTGTCTGCGCTT 39666
|| | ||||| ||||| || || || | ||| | | | ||||| | |||
Sbjct 157731 GTGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCGGAGCTC 157673
Query 39667 TCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|| || ||||| || ||||| || ||||| | ||||| |||||||||||||||
Sbjct 157672 TCGACTTCCAAGGTGATTGTCTTGCCCGTCAGGGTTTTCACGAAGATCTGCATG 157619
>seq3059
Length=143113
Score = 118 bits (130), Expect = 7e-22
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 39508 AGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCG 39567
|| |||| ||| | ||| ||| ||||| ||||| ||||||||||| ||| ||||
Sbjct 1993 AGGACCAGATGGAGAGTCGATTCCTTTTGGATATTGTAATCGGCCAAGGTGCGACCATCC 2052
Query 39568 TCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCG 39627
|||| |||||| ||| |||| || || ||||||||||||| || | ||||||||| ||
Sbjct 2053 TCCAGTTGTTTGCCGGCAAAGATCAATCGCTGCTGATCCGGAGGGATGCCTTCTTTATCT 2112
Query 39628 CATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTT 39687
|| || ||| | | ||| ||||| | |||||| || || | ||| || ||
Sbjct 2113 TGAATCTTAGCTTTGACATTATCTATGGTGTCGGAGCTTTCGACTTCAAGAGTGATAGTC 2172
Query 39688 TTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|| || || | ||||| ||||| |||||||||
Sbjct 2173 TTGCCGGTCAGGGTTTTCACGAATATCTGCATG 2205
Score = 102 bits (112), Expect = 6e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551
||| || || | ||| || |||| ||||| ||| || || || || |||||||||||
Sbjct 2205 GCCACCGCGGAGACGGAGGACCAGATGCAGAGTCGACTCCTTCTGGATGTTATAATCGGC 2264
Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611
| || | || |||| || || ||| | || || |||||||||||||||| ||
Sbjct 2265 GAGTGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCCGGAGG 2324
Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCAC 39671
| ||||||||| || || || ||| | | ||| ||||| | |||||| ||
Sbjct 2325 GATGCCTTCTTTATCTTGAATCTTAGCTTTGACATTATCTATGGTGTCGGAGCTTTCGAC 2384
Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|| | ||| ||||| || || |||| ||||| ||||| |||||||||
Sbjct 2385 TTCAAGAGTGATTGTCTTGCCGGTTAGGGTTTTGACGAATATCTGCATG 2433
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| ||||| | ||| || |||| ||| | ||| ||| ||||| |||||||| |||||
Sbjct 2662 CCACCTCGGAGACGGAGGACCAGATGAAGAGTCGATTCCTTTTGGATATTATAGTCGGCG 2721
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| | | |||| |||| || |||||| | || || || |||||||| ||| ||
Sbjct 2722 AGGGTCCTTCCATCTTCCAGCTGCTTCCCGGCGAAGATCAATCGCTGCTGGTCCACAGGA 2781
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| ||||||||| || || || || | | ||| ||||||| |||||| ||
Sbjct 2782 ATGCCTTCTTTATCTTGAATCTTGGCCTTGACATTATCTATAGTGTCTGAGCTTTCAACC 2841
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| | || |||||||| || || | || || || |||||||||||
Sbjct 2842 TCTAGGGTGATTGTTTTTCCGGTGAGGGTCTTCACAAAGATCTGCAT 2888
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551
||| || || | ||| || |||| ||| | ||| || || || |||||||| |||||
Sbjct 2433 GCCACCGCGGAGACGGAGGACCAGATGAAGAGTTGACTCCTTCTGGATATTATAGTCGGC 2492
Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611
| | | |||| |||| || |||||| | ||||| || | |||||| |||| ||
Sbjct 2493 GAGGGTCCTTCCATCTTCCAGCTGCTTCCCGGCGAAAATCAACCTCTGCTGGTCCGGAGG 2552
Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCAC 39671
| ||||||||||| || || || | | | | |||||| | |||||||||
Sbjct 2553 AATCCCTTCTTTGTCTTGAATCTTAGCCTTGACATTATCAATTGTGTCGGAGCTTTCCAC 2612
Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| | ||| || || || || || | ||||| ||||||||||||||
Sbjct 2613 TTCAAGAGTGATAGTCTTGCCAGTCAGGGTTTTAACGAAGATCTGCAT 2660
>seq9733
Length=51005
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || || | ||||| || | ||| | ||| ||| || || ||||| ||||| |||
Sbjct 36971 CCACCACGAAGACGCAAGACAAGATGAAGAGTTGATTCCTTCTGAATATTGTAATCAGCC 37030
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
||| | | |||| |||||||||||||| ||||||| || | ||||||||| | |||
Sbjct 37031 AAAGTCCTTCCATCTTCCAATTGTTTCCCAGCAAAAATCAACCTCTGCTGATCTGGGGGA 37090
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| ||||||||||| || || || | | | | || || | || |||||
Sbjct 37091 ATCCCTTCTTTGTCCTGAATCTTCGCCTTGACATTATCAATCGTATCAGAACTCTCCACC 37150
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|||| |||||| ||||| || || ||||| || ||||||||||||||
Sbjct 37151 TCCAGAGTAATGGTTTTCCCAGTCAAAGTCTTGACGAAGATCTGCAT 37197
>seq3967
Length=121343
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
||||| || | ||||| || | || | ||| ||| || || ||||| ||||| |||
Sbjct 66687 CCGCCACGAAGACGCAAGACAAGGTGAAGAGTAGATTCCTTCTGGATATTGTAATCAGCC 66628
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
||| | | |||| |||||||||||||| | ||||| || | ||||||||| | |||
Sbjct 66627 AAAGTCCTTCCATCTTCCAATTGTTTCCCAGCGAAAATCAACCTCTGCTGATCTGGGGGA 66568
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| ||||| ||||| || || || | | ||| || || | || |||||
Sbjct 66567 ATCCCTTCCTTGTCCTGAATCTTCGCCTTCACGTTATCTATCGTATCAGAACTCTCCACC 66508
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|||| |||||| ||||| || || ||||| || ||||||||||||||
Sbjct 66507 TCCAGAGTAATGGTTTTCCCAGTCAAAGTCTTGACGAAGATCTGCAT 66461
>seq6053
Length=86585
Score = 111 bits (122), Expect = 1e-19
Identities = 142/193 (74%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 39528 TTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAA 39587
||| || || ||||| ||||||||||| ||| ||||||| || || |||||| | ||
Sbjct 18641 TTCCTTCTGAATATTGTAATCGGCCAAGGTGCGACCATCGTCTAACTGCTTCCCGGCGAA 18582
Query 39588 AATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGT-TTAATCG 39646
|| || |||||||| |||| || | |||||| ||||| | | | || || || |
Sbjct 18581 GATCAATCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTC-CTGAATCTTGGTCTTGACAT 18523
Query 39647 TCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTA 39706
| ||| ||||| | ||||||||| || | ||| || || || || |||| ||||| |
Sbjct 18522 TGTCTATGGTGTCAGAGCTTTCCACTTCAAGAGTGATAGTCTTGCCGGTTAGGGTTTTAA 18463
Query 39707 CGAAGATCTGCAT 39719
|||||||||||||
Sbjct 18462 CGAAGATCTGCAT 18450
>seq11709
Length=37133
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || || | ||||| || | || | |||| ||| || || ||||| ||||| ||
Sbjct 7520 CCACCACGAAGACGCAAGACAAGGTGAAGAGTGGATTCCTTCTGGATATTGTAATCAGCA 7579
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| | | | |||| |||||||||||||| | ||||| || | ||||||||| | |||
Sbjct 7580 AGAGTCCTTCCATCTTCCAATTGTTTCCCAGCGAAAATCAACCTCTGCTGATCTGGGGGA 7639
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| ||||||||||| || || |||| | | | || || | ||| |||||
Sbjct 7640 ATCCCTTCTTTGTCCTGAATCTTCGCCTTAACATTATCGATCGTATCAGAGCTCTCCACC 7699
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|||| ||||| ||||| || || ||||| || ||||||||||||||
Sbjct 7700 TCCAGGGTAATGGTTTTCCCAGTCAAAGTCTTGACGAAGATCTGCAT 7746
>seq2335
Length=171082
Score = 105 bits (116), Expect = 5e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 39529 TCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAA 39588
||||| || ||||||||||| |||||| | |||| ||||||||||| || ||||
Sbjct 23638 TCTTTCTGAATATTATAATCAGCCAAAGTCCTGCCATCTTCCAATTGTTTACCAGCAAAG 23579
Query 39589 ATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTC 39648
|| | | ||||||||||| || | ||||| ||||| || || |||| |
Sbjct 23578 ATGAGCCTCTGCTGATCCGGTGGGATCCCTTCCTTGTCCTGAATCTTAGCCTTAACATTA 23519
Query 39649 GCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACG 39708
| | || || | |||||| || ||||||||||| ||||| || || ||||| |||||
Sbjct 23518 TCAATCGTATCCGAGCTTTCAACTTCCAAAGTAATCGTTTTCCCAGTCAAAGTCTTTACA 23459
Query 39709 AAGATCTGCAT 39719
|| ||||||||
Sbjct 23458 AAAATCTGCAT 23448
>seq8995
Length=56531
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551
|||||| || | | || |||| ||| | ||| ||| ||||| ||||| ||||| ||
Sbjct 47867 GCCGCCACGAAGCCTGAGGACCAGATGGAGAGTCGATTCCTTTTGGATATTGTAATCCGC 47808
Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCC-GAGG 39610
||| ||| |||| || | |||||| ||| | || || || |||||||||||| ||||
Sbjct 47807 CAAGGTGCGGCCATCCTCGAGTTGTTTTCCGGCGAAGATCAATCGCTGCTGATCCTGAGG 47748
Query 39611 GTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCA 39670
| | ||||||||| || || || ||| | | ||| ||||| | |||||| |
Sbjct 47747 G-ATGCCTTCTTTATCTTGAATCTTAGCTTTGACATTATCTATGGTGTCGGAGCTTTCGA 47689
Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
| || | ||| || || || | |||| ||||| || |||||||||||
Sbjct 47688 CATCGAGAGTGATAGTCTTGCAGGTTAGGGTTTTAACAAAGATCTGCAT 47640
Score = 96.9 bits (106), Expect = 2e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551
||| || || | ||| || |||| ||| | ||| ||| || || || || ||||| ||
Sbjct 47411 GCCACCGCGTAGACGGAGGACCAGATGGAGAGTCGATTCCTTCTGGATGTTGTAATCCGC 47352
Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611
||| ||| |||| || | ||||| ||| | || || || |||||||| |||| ||
Sbjct 47351 CAATGTGCGACCATCCTCAAGCTGTTTTCCGGCGAAGATCAATCGCTGCTGGTCCGGAGG 47292
Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCAC 39671
| ||||||||| || || || |||| | | | ||||||| |||||||||
Sbjct 47291 GATGCCTTCTTTATCTTGAATCTTGGCCTTAACATTATCGATGGTGTCTGAGCTTTCCAC 47232
Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| | || |||||||| || || | || || || |||||||||||
Sbjct 47231 CTCGAGGGTGATTGTTTTTCCGGTGAGGGTCTTCACAAAGATCTGCAT 47184
Score = 89.7 bits (98), Expect = 4e-13
Identities = 161/231 (70%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
||||| || | ||| || |||| ||| | ||| || || || |||||||| |||||
Sbjct 47638 CCGCCGCGGAGACGGAGGACCAGATGGAGAGTCGACTCCTTCTGGATATTATAGTCGGCG 47579
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| | | | |||| |||| || |||||| | ||||| || | |||||| |||| ||
Sbjct 47578 AGAGTCCTTCCATCTTCCAGCTGCTTCCCGGCGAAAATCAACCTCTGCTGGTCCGGAGGA 47519
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTG--TTTA-ATCGTCGCTACTGTGTCTGCGCTTTCC 39669
| || || || || | | | || | || | || ||| | |||||| | ||| ||
Sbjct 47518 ATCCCCTCCTTATC-CTGAATCTTGGCCTTGACATTGTCAAT--TGTGTCGGAGCTCTCG 47462
Query 39670 ACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|| || | ||||||||| || ||||||| |||| || ||||||||||||
Sbjct 47461 ACTTCAATAGTAATTGTCTTGCCCGTTAGGATTTTAACAAAGATCTGCATG 47411
>seq1833
Length=187927
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || || | |||||| || | || | |||| ||| || || ||||| ||||| ||
Sbjct 43254 CCACCACGAAGACGCAGGACAAGGTGAAGAGTGGATTCCTTCTGGATATTGTAATCAGCA 43313
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| | | | |||| |||||||||||||| | ||||| || | |||||||| | |||
Sbjct 43314 AGAGTCCTTCCATCTTCCAATTGTTTCCCAGCGAAAATCAACCTTTGCTGATCTGGGGGA 43373
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| ||||||||||| || || |||| | | | || || | || |||||
Sbjct 43374 ATCCCTTCTTTGTCCTGAATCTTCGCCTTAACATTATCGATCGTATCAGAACTCTCCACT 43433
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|||| ||||| ||||| || || ||||| || ||||||||||||||
Sbjct 43434 TCCAGGGTAATGGTTTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 43480
>seq7474
Length=135391
Score = 95.1 bits (104), Expect = 8e-15
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564
|| || || | ||||| |||| || || ||||| || ||||| || | | | ||
Sbjct 127576 CGAAGGACAAGATGCAGAGTGGACTCCTTCTGTATGTTGTAATCTGCAAGAGTTCTCCCA 127517
Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624
|| |||| || || || ||||||| || | ||||||||| | || | ||||| |||
Sbjct 127516 TCCTCCAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTTG 127457
Query 39625 TCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATT 39684
|| || |||| |||| | ||| ||||||| ||||| || ||||| || |||
Sbjct 127456 TCTTGAATCTTTTCCTTAACATTGTCTATGGTGTCTGAACTTTCAACCTCCAATGTTATT 127397
Query 39685 GTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| || || ||||| || || || |||||||||||
Sbjct 127396 GTCTTCCCGGTTAAGGTCTTCACAAAGATCTGCAT 127362
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || |||| |||| ||||| || | ||| || ||||| |||||||| || |||
Sbjct 127132 CCACCACGCAGGCGCAACACCAAGTGAAGAGTCGACTCCTTTTGGATATTATAGTCAGCC 127073
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
|| | | |||| || | ||| || || ||||||| | | ||||| || | |||
Sbjct 127072 AACGTCCTTCCATCTTCAAGTTGCTTGCCAGCAAAAATGAGTCTTTGCTGGTCTGGGGGG 127013
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCG-CTACTGTGTCTGCGCTTTCCAC 39671
| || || || || || ||| || | ||| | | | |||||||| |||||| ||
Sbjct 127012 ATACCCTCCTTATCTTGGATCTTTGCCTTCA-CGTTGTCAATTGTGTCTGAGCTTTCAAC 126954
Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|||||||| || || || || || | ||| || || |||||||||||
Sbjct 126953 TTCCAAAGTGATGGTCTTTCCAGTAAGAGTCTTCACAAAGATCTGCAT 126906
>seq433
Length=331005
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || || | ||||| || | || | |||| ||| || || ||||| ||||| ||
Sbjct 37047 CCACCACGAAGACGCAAGACAAGGTGAAGAGTGGATTCCTTCTGGATATTGTAATCAGCA 36988
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| | | | |||| |||||||||||||| | ||||| || | ||||||||| | |||
Sbjct 36987 AGAGTCCTTCCATCTTCCAATTGTTTCCCAGCGAAAATCAACCTCTGCTGATCTGGGGGA 36928
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| ||||||||||| || || |||| | | | || || | || |||||
Sbjct 36927 ATCCCTTCTTTGTCCTGAATCTTCGCCTTAACATTATCGATCGTATCAGAACTCTCCACC 36868
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| | || || ||||| || || ||||| || ||||||||||||||
Sbjct 36867 TCTAGGGTTATGGTTTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 36821
>seq621
Length=294110
Score = 93.3 bits (102), Expect = 3e-14
Identities = 138/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 39528 TTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAA 39587
||| || || ||||| ||||||||||| ||| |||| || | || || ||| | ||
Sbjct 255800 TTCCTTCTGAATATTGTAATCGGCCAAGGTGCGACCATCCTCTAGCTGCTTTCCGGCGAA 255741
Query 39588 AATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGT 39647
|| || |||||||| |||| || | |||||| ||||| | | | || | | |||
Sbjct 255740 GATCAATCGCTGCTGGTCCGGAGGGATGCCTTCCTTGTC-CTGAATCTTCGCCTTGACGT 255682
Query 39648 CG-CTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTA 39706
| ||| ||||| | |||||| || || | ||| || ||||| || || | ||||| |
Sbjct 255681 TGTCTATGGTGTCAGAGCTTTCGACTTCAAGAGTTATAGTTTTGCCAGTCAGGGTTTTAA 255622
Query 39707 CGAAGATCTGCAT 39719
|||||||||||||
Sbjct 255621 CGAAGATCTGCAT 255609
Score = 82.4 bits (90), Expect = 5e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552
|| || || | ||| || |||| ||| | || ||||| || || ||||| |||||
Sbjct 255607 CCACCACGGAGACGGAGGACCAGATGGAGTGTCGACTCTTTCTGAATGTTATAGTCGGCG 255548
Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612
| | || | || || | || |||||| | || || || ||||| || |||| |||
Sbjct 255547 AGAGTACGGCCGTCTTCGAGCTGCTTCCCGGCGAAGATCAATCGCTGTTGGTCCGGAGGT 255488
Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672
| |||||| ||||| || || || | | ||| ||||||| |||||| ||
Sbjct 255487 ATGCCTTCCTTGTCCTGAATCTTGGCCTTGACGTTATCTATGGTGTCTGAGCTTTCGACT 255428
Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|| | || || || || || || || ||||| |||||||||||||||
Sbjct 255427 TCAAGTGTTATAGTCTTGCCGGTCAAGGTTTTGACGAAGATCTGCATG 255380
>seq10551
Length=45279
Score = 89.7 bits (98), Expect = 4e-13
Identities = 162/236 (69%), Gaps = 1/236 (0%)
Strand=Plus/Minus
Query 39485 AATCA-TCGCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTA 39543
||||| | ||| || || | || || || | ||||| ||| || || || || ||
Sbjct 35732 AATCAGTAGCCACCACGGAGGCGAAGGACAAGATGCAGGGTGGACTCCTTCTGGATGTTG 35673
Query 39544 TAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGA 39603
||||| || ||| || |||| ||||| || ||||| |||| || || | |||||||
Sbjct 35672 TAATCAGCTAAAGTTCGACCATCCTCCAACTGCTTCCCAGCAAAGATCAACCTCTGCTGA 35613
Query 39604 TCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCG 39663
|||| ||| | || || ||||| || ||| ||| | | | | ||||||| |
Sbjct 35612 TCCGGGGGAATTCCCTCCTTGTCCTGAATCTTTGCTTTCACATTGTCAATCGTGTCTGAG 35553
Query 39664 CTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
||||| || || | || ||||||||||| || | || || || || ||||||||
Sbjct 35552 CTTTCAACCTCAAGGGTGATTGTTTTACCAGTCAGGGTCTTGACAAATATCTGCAT 35497
Score = 86.0 bits (94), Expect = 4e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564
|||| ||||| |||| ||| || ||||| || ||||||||||| | | | ||
Sbjct 35483 CGCAAAACCAAGTGCAGAGTTGACTCCTTTTGAATGTTATAATCGGCAAGAGTCCTCCCA 35424
Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624
|| || | || || || ||||||| || | |||||| || | |||| ||| || ||
Sbjct 35423 TCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGTATGCCCTCCTTA 35364
Query 39625 TCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATT 39684
|| || || || | | | | |||||| | ||| ||||| ||||| |||||
Sbjct 35363 TCCTGGATCTTGGCCTTGACATTGTCAATTGTGTCAGAGCTCTCCACCTCCAATGTAATG 35304
Query 39685 GTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
|| ||||| || |||||||| || || ||||||||
Sbjct 35303 GTCTTACCGGTCAAAGTTTTCACAAAAATCTGCAT 35269
>seq14711
Length=21231
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564
|| || |||||||| | ||| || ||||| |||||||||||||| | | | | ||
Sbjct 5055 CGGAGAACCAAATGGAGAGTAGACTCCTTTTGGATATTATAATCGGCAAGAGTTCTTCCA 4996
Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624
|| || | ||||| || ||||||| || | || || || | || | |||||||||
Sbjct 4995 TCTTCAAGCTGTTTTCCTGCAAAAATCAATCTTTGTTGGTCTGGTGGAATTCCTTCTTTG 4936
Query 39625 TCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATT 39684
|| ||||| ||| | | | | || |||| || || || ||||| ||||||
Sbjct 4935 TCCTGAATTTTGGCTTTCACATTATCAATGGTATCTGAACTCTCAACCTCCAAGGTAATT 4876
Query 39685 GTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|| || || || | ||| || || ||||| ||||||
Sbjct 4875 GTCTTTCCAGTAAGAGTCTTGACAAAGATTTGCATG 4840
Score = 84.2 bits (92), Expect = 2e-11
Identities = 161/234 (69%), Gaps = 5/234 (2%)
Strand=Plus/Minus
Query 39488 CATCGCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCT--TTTTGTATATTATA 39545
|||| || || ||||| |||| ||||| || ||||| | || ||||| ||||||||
Sbjct 5299 CATC-CCACCACGCAAGCGCAACACCAAGTG--AAGTGTTGACTCCTTTTGGATATTATA 5243
Query 39546 ATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATC 39605
|| ||||| | | |||| || | ||| || ||| |||| || | | ||||| ||
Sbjct 5242 GTCTGCCAATGTCCTTCCATCTTCAAGTTGCTTGCCGGCAAAGATGAGTCTTTGCTGGTC 5183
Query 39606 CGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCT 39665
| ||| | || || ||||| || ||| || | | | | |||||||| ||
Sbjct 5182 TGGGGGAATACCCTCCTTGTCTTGGATCTTTGCCTTCACATTGTCAATTGTGTCTGAACT 5123
Query 39666 TTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719
||| || |||||||| || || || || || | ||| || || |||||||||||
Sbjct 5122 TTCAACTTCCAAAGTGATGGTCTTTCCAGTAAGAGTCTTCACAAAGATCTGCAT 5069
>seq6038
Length=86802
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551
||||||||| | ||||| ||||| || | || || ||||| || ||||| || ||
Sbjct 72135 GCCGCCTCGGAGACGCAACACCAAGTGGAGGGTAGACTCCTTTTGAATGTTATAGTCTGC 72076
Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611
| | |||| || | |||||||| |||||||||| | |||||| |||| ||
Sbjct 72075 TAGGGTCCTACCATCTTCAAGCTGTTTCCCAGCAAAAATTAACCTCTGCTGGTCCGGTGG 72016
Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCAC 39671
| ||| || ||||| || || || | | | | |||||| | ||| |||||
Sbjct 72015 GATGCCCTCCTTGTCCTGAATCTTAGCCTTCACATTATCAATTGTGTCGGAGCTCTCCAC 71956
Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|| | ||| ||||| || || || | ||||| || ||||||||||||
Sbjct 71955 CTCAAGAGTGATTGTCTTGCCGGTAAGGGTTTTCACAAAGATCTGCATG 71907
>seq226
Length=390889
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551
||| ||||| | ||||| |||||||| | || || ||||| || ||||| || ||
Sbjct 303764 GCCACCTCGGAGACGCAACACCAAATGGAGGGTAGACTCCTTTTGAATGTTATAGTCTGC 303705
Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611
| | |||| || | |||||||| |||||||||| | |||||| |||| ||
Sbjct 303704 TAGGGTCCTGCCATCTTCAAGCTGTTTCCCAGCAAAAATTAACCTCTGCTGGTCCGGTGG 303645
Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCAC 39671
| ||| || ||||| || || || | | | | |||||| | ||| |||||
Sbjct 303644 GATGCCCTCCTTGTCCTGAATCTTAGCCTTCACATTATCAATTGTGTCGGAGCTCTCCAC 303585
Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|| | || ||||| || || || | |||||| || ||||||||||||
Sbjct 303584 CTCAAGGGTGATTGTCTTGCCAGTAAGAGTTTTCACAAAGATCTGCATG 303536
>seq10
Length=577822
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 39529 TCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAA 39588
|||||||| || |||||||| || ||| | |||| ||||||||||| || ||||
Sbjct 561986 TCTTTTTGAATGTTATAATCAGCTAAAGTCCTCCCATCCTCCAATTGTTTGCCTGCAAAG 562045
Query 39589 ATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTC 39648
|| | | |||||||| | ||| | ||||| || || || || || | |
Sbjct 562046 ATAAGCCTTTGCTGATCAGGGGGGATTCCTTCCTTATCCTGAATCTTCGCCTTCACATTA 562105
Query 39649 GCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACG 39708
||| || || | |||||||| ||||| || |||||||| || || || || || ||
Sbjct 562106 TCTATCGTATCCGAACTTTCCACCTCCAAGGTGATTGTTTTGCCGGTCAATGTCTTCACA 562165
Query 39709 AAGATCTGCAT 39719
|||||||||||
Sbjct 562166 AAGATCTGCAT 562176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347041549360304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |