Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hibiscus_20syriacus_20[genbank_20GCA_5F001696755.1_202016-07-29] 77,488 sequences; 1,748,252,795 total letters Query= NC_015288.1 Length=191195 Score E Sequences producing significant alignments: (Bits) Value seq2693 309 4e-79 seq3550 217 2e-51 seq31365 214 2e-50 seq5102 194 2e-44 seq15646 178 2e-39 seq9889 176 6e-39 seq369 159 4e-34 seq7993 149 8e-31 seq695 149 8e-31 seq1349 114 2e-20 seq800 104 3e-17 seq869 93.3 5e-14 >seq2693 Length=259752 Score = 309 bits (342), Expect = 4e-79 Identities = 493/705 (70%), Gaps = 2/705 (0%) Strand=Plus/Minus Query 183496 TTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCTCGCTTGATTGGTATCCGT 183555 |||| || || ||||| ||| | || | ||||||||||| || || || | || Sbjct 245625 TTTGGACTAATAGGTTTTATGTTACGTAAATTTGAACTTGCGCGATTTCTTCAATTGCGA 245566 Query 183556 CCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGTGTATTCCTTATC 183615 ||||| ||||| || | ||||||||||| |||| ||||||||| ||||||| | | Sbjct 245565 CCTTATAATGCAATCGTATTCTCTGGTCCAATTGTTGTTTTTGTTTCTGTATTCTTGGTT 245506 Query 183616 TATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAATCTTT 183675 |||||||| ||||||||| ||||||||||| || | ||| || |||||||| || ||| Sbjct 245505 TATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCCAATTTTGGTGTAGCAGCTATATTT 245446 Query 183676 AGATTCCTATTGTTCCTTCAGGGTTTCCACAACTGGACGTTAAACCCCTTCCATATGATG 183735 |||||| | | || | || || || || || ||||| | || || || ||||||||| Sbjct 245445 AGATTCATCCTCTTTTTCCAAGGATTTCATAATTGGACATCGAATCCATTTCATATGATG 245386 Query 183736 GGAGTTGCTGGTATACTAGGAGGAGCACTACTCAGTGCTATCCATGGTGTCACAGTAGAG 183795 ||||||| || || | || | || | || | ||||| |||| || || |||||| Sbjct 245385 GGAGTTGTCTGTGTATTGGGTGTGGCTTTGCTATGCGCTATTCATGATGCTACCGTAGAG 245326 Query 183796 AATACATTGTATGAAGATGGAGAACAAGCAAACACATTCAAGGCATTTGATTCCACTCAA 183855 | ||| || | ||||||||| || ||||| | ||| || ||| | | |||||| Sbjct 245325 ATTACTTTATTTGAAGATGGTGATGGTGCAAATAAATTTCGTGCTTTTAACCCAACTCAA 245266 Query 183856 GAAGAAGAGACGTATTCTATGGTTACAGCGAATCGTTTCTGGTCACAAATCTTCGGGGTT 183915 | ||||| || ||||| ||||| || || || || ||||| |||||||| |||||| Sbjct 245265 GCCGAAGAAACTTATTCAATGGTCGTCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTT 245206 Query 183916 GCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTT 183975 ||| |||||| |||||||| || ||||||||||| ||||| || | ||| | Sbjct 245205 -TTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAATAGCTGGTTTA 245147 Query 183976 TGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGATTTTGTA 184035 | | | | || |||| | | || || ||||| || || |||| ||||| || || Sbjct 245146 TAGATGAGTGCTCTTGGAGTAGTCGGTCTGGCTCTGAACCTACGTGTCTATGACTTCGTT 245087 Query 184036 AGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACGTTCTACA-CAAAGAACAT 184094 || || || ||| ||||||| ||||||||| ||||||| |||| | | Sbjct 245086 TCCCAGGAAATTTATGCAATGAAAGATCCCACATTTGAGACTTTCTACATCAAAAATATT 245027 Query 184095 ACTTCTTAATGAAGGACTACGTGCATGGTTAGCACCTTCTGATCAACCACATGAGAATTT 184154 | || | || ||||| | | ||| ||| | || || ||||| || ||||| || | Sbjct 245026 ATTTTTAAACGAAGGTATTCCTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAAACT 244967 Query 184155 TATATTTCCAGAGGAGGTATTACCTAGAGGCAATGCTCTTTGATG 184199 |||||| | |||||||| |||| | || || ||||||| ||| Sbjct 244966 TATATTCCTTGAGGAGGTTCTACCCTGTGGAAACGCTCTTTAATG 244922 >seq3550 Length=137586 Score = 217 bits (240), Expect = 2e-51 Identities = 241/320 (75%), Gaps = 1/320 (0%) Strand=Plus/Minus Query 182461 TCGGTCAAGAAGAAGAGACCTATAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGA 182520 |||||||||| ||||| || ||||| ||||| || || ||||| || || || || |||| Sbjct 93203 TCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGA 93144 Query 182521 TCTTCCAATACGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGC 182580 |||| | || || |||||||| || ||||| || || |||||| | ||||| | || Sbjct 93143 TCTTTCGGTATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCTGCTTAGC 93084 Query 182581 CTGTTGTTGGAATCTGGTTCACCGCACTTGGTGTCTCCACGATGGCATTCAACCTCAACG 182640 | || || || ||||||||||| || | ||| | ||| ||| | |||||||| || | Sbjct 93083 CCGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACCATGACTTTCAACCTAAATG 93024 Query 182641 GTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTCCTTAACACTTGGGCAG 182700 ||||||| || ||||| | | ||||| |||| |||||||| |||| || |||| | Sbjct 93023 GTTTCAATTTTAACCAATTTGTAGTTGATAGTCAAGGTCGTGTAATTAATAC-CGGGCTG 92965 Query 182701 ATGTATTGAACCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACT 182760 || | | |||| |||| |||||||||||||||||||||| | ||| || || |||| Sbjct 92964 ATATTATTAACCATGCTAACTTTGGTATGGAAGTTATGCATGAACTTAAGGCTCATAACT 92905 Query 182761 TCCCACTAGATCTTGCTGCT 182780 |||| ||||| || |||||| Sbjct 92904 TCCCTCTAGACCTAGCTGCT 92885 >seq31365 Length=1132 Score = 214 bits (236), Expect = 2e-50 Identities = 240/320 (75%), Gaps = 1/320 (0%) Strand=Plus/Minus Query 182461 TCGGTCAAGAAGAAGAGACCTATAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGA 182520 |||||||||| ||||| || ||||| ||||| || || ||||| || || | || |||| Sbjct 472 TCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGCCCGATTGA 413 Query 182521 TCTTCCAATACGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGC 182580 |||| | || || |||||||| || ||||| || || |||||| | ||||| | || Sbjct 412 TCTTTCGGTATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCTGCTTAGC 353 Query 182581 CTGTTGTTGGAATCTGGTTCACCGCACTTGGTGTCTCCACGATGGCATTCAACCTCAACG 182640 | || || || ||||||||||| || | ||| | ||| ||| | |||||||| || | Sbjct 352 CCGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACCATGACTTTCAACCTAAATG 293 Query 182641 GTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTCCTTAACACTTGGGCAG 182700 ||||||| || ||||| | | ||||| |||| |||||||| |||| || |||| | Sbjct 292 GTTTCAATTTTAACCAATTTGTAGTTGATAGTCAAGGTCGTGTAATTAATAC-CGGGCTG 234 Query 182701 ATGTATTGAACCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACT 182760 || | | |||| |||| |||||||||||||||||||||| | ||| || || |||| Sbjct 233 ATATTATTAACCATGCTAACTTTGGTATGGAAGTTATGCATGAACTTAAGGCTCATAACT 174 Query 182761 TCCCACTAGATCTTGCTGCT 182780 |||| ||||| || |||||| Sbjct 173 TCCCTCTAGACCTAGCTGCT 154 >seq5102 Length=101622 Score = 194 bits (214), Expect = 2e-44 Identities = 275/381 (72%), Gaps = 8/381 (2%) Strand=Plus/Minus Query 181821 AATCGTCTCTATGTCGGTTGGTTTGGTGTGCTGATGATCCCAACTCTGTTGGCGGCAACC 181880 || ||||| || |||| ||||||||||| |||||||||| || | ||| | ||||| Sbjct 52310 AACCGTCTTTACATCGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 52251 Query 181881 ATCTGT-TTCATCGTTGCTTTCGTAGCAGCACCTCCTGTCGATATCGACGGTATCCGCGA 181939 ||||| || || | || ||| | || || ||||| || ||||| || ||||| || || Sbjct 52250 -TCTGTATTTATTATCGCCTTCATTGCTGCTCCTCCAGTAGATATTGATGGTATTCGTGA 52192 Query 181940 ACCCGTAGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCATC 181999 ||| || |||| || || | || || ||||| || || |||||||| || | || | Sbjct 52191 ACCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 52132 Query 182000 CTCCAACGCAATTGGTCTTCACTTCTACCCAATCTGGGAAGCTGCCTCACTTGATGAGTG 182059 || || || ||| | ||||| ||||| ||||||||||| || || ||||||| || Sbjct 52131 TTCTGCAGCTATAGGTTTGCACTTTTACCCGATCTGGGAAGCGGCATCCGTTGATGAATG 52072 Query 182060 GCTGTATAACGGTGGTCCTTTCCAACTGGTTGTTTTCCACTTCCTGATCGGCATCTACGC 182119 | | || || || ||||||| | | ||||||| |||||| | | || | || || Sbjct 52071 GTTATACAATGGCGGTCCTTATGAGTTAATTGTTTTACACTTCTTACTTGG--TGTA-GC 52015 Query 182120 ---CTACATGGGACGTGAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCCTGGATCTG 182176 |||||||| ||||||||||||||| || ||| | |||||||| || |||||| Sbjct 52014 TTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATCGC 51955 Query 182177 TGTAGCATACTCTGCTCCAGT 182197 ||| ||||| || ||||| || Sbjct 51954 TGTTGCATATTCAGCTCCTGT 51934 >seq15646 Length=30608 Score = 178 bits (196), Expect = 2e-39 Identities = 215/293 (73%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 183907 TTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTC 183966 || |||||||| ||| |||||| |||||||| || ||||||||||| ||||| || || Sbjct 24043 TTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTA 23984 Query 183967 ATGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGCTTAT 184026 | ||| | ||| | | || |||| | | || || ||||| || || ||||| ||| Sbjct 23983 ACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCTCTGAACCTACGTGCCTAT 23924 Query 184027 GATTTTGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACGTTCTACACA 184086 || || || || || ||| | ||||| |||||||| ||||||||||| |||||||| Sbjct 23923 GACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACC 23864 Query 184087 AAGAACATACTTCTTAATGAAGGACTACGTGCATGGTTAGCACCTTCTGATCAACCACAT 184146 || || || ||| | || ||||| | ||||| ||| | || || ||||| || ||| Sbjct 23863 AAAAATATTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCAT 23804 Query 184147 GAGAATTTTATATTTCCAGAGGAGGTATTACCTAGAGGCAATGCTCTTTGATG 184199 || || ||||||| || |||||||| |||| | || || ||||||| ||| Sbjct 23803 GAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAATG 23751 Score = 161 bits (178), Expect = 1e-34 Identities = 257/365 (70%), Gaps = 4/365 (1%) Strand=Plus/Minus Query 183214 CGCTTTGTCTTTGTGGGCTGGTCTGGACTCCTACTTCTTCCCACTGCTTATCTTGCCATT 183273 || || || ||||| || ||||| || || | || |||| ||| ||| | || | Sbjct 24407 CGTTTCGTTTTTGTAGGTTGGTCCGGCCTATTGCTCTTTCCTTGTGCCTATTTCGCTTTA 24348 Query 183274 GGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGGTATACCCATGGACTTGCTTCT 183333 || |||||| |||| || ||| | ||||| || |||||||| |||||| | || | Sbjct 24347 GGGGGTTGGTTTACAGGTACAACCTTTGTAACTTCGTGGTATACTCATGGATTGGCCAGT 24288 Query 183334 TCCTATCTTGAAGG-TGCTAACTTTCTTA-CGGCAGCTGTCTCGACGCCTGCTGACGCTA 183391 |||||| | ||||| ||| | ||||||| | || || || ||||| |||||| | | Sbjct 24287 TCCTATTTGGAAGGCTGCAA--TTTCTTAACCGCCGCAGTTTCGACTCCTGCTAATAGTT 24230 Query 183392 TGGGTCATTCTCTTCTGTTACTTTGGGGTCCTGAGTCTCAAGGGGACTTTCAACGCTGGT 183451 | | |||||| | ||||||| ||||||||||| | ||||| || ||| || |||| Sbjct 24229 TAGCGCATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGT 24170 Query 183452 GCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCACGGTGCCTTTGCTCTCATTGGTT 183511 | ||| | || || || |||| ||||| || |||||||| || || | || || |||| Sbjct 24169 GTCAATTAGGCGGTCTGTGGACATTTGTTGCTCTCCACGGCGCTTTCGGACTAATAGGTT 24110 Query 183512 TCATGCTTCGACAGTTTGAACTTGCTCGCTTGATTGGTATCCGTCCTTACAATGCTATTG 183571 | ||| | || || ||||||||||| || | || | || ||||| ||||| || | Sbjct 24109 TTATGTTACGTCAATTTGAACTTGCGCGATCTGTTCAATTGCGACCTTATAATGCAATCG 24050 Query 183572 CGTTC 183576 | ||| Sbjct 24049 CATTC 24045 >seq9889 Length=72821 Score = 176 bits (194), Expect = 6e-39 Identities = 280/398 (70%), Gaps = 4/398 (1%) Strand=Plus/Plus Query 183193 GATGACTGGGTTAAACGCGATCGCTTTGTCTTTGTGGGCTGGTCTGGACTCCTACTTCTT 183252 ||||||||| | | || || || || ||||| || ||||| || || | || || Sbjct 45048 GATGACTGGTTACGTAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGCCTATTGCTCTTT 45107 Query 183253 CCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGG 183312 || ||| ||| | || | || |||||| |||| || ||| | ||||| || ||| Sbjct 45108 CCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTTACAGGTACAACCTTTGTAACTTCGTGG 45167 Query 183313 TATACCCATGGACTTGCTTCTTCCTATCTTGAAGG-TGCTAACTTTCTTA-CGGCAGCTG 183370 ||||| |||||| | || ||||||| | ||||| ||| | ||||||| | || || | Sbjct 45168 TATACTCATGGATTGGCCAGTTCCTATTTGGAAGGCTGCAA--TTTCTTAACCGCCGCAG 45225 Query 183371 TCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTGTTACTTTGGGGTCCTGAGTCTC 183430 | ||||| |||||| | | | | |||||| | ||||||| ||||||||||| | | Sbjct 45226 TTTCGACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTATGGGGTCCTGAAGCAC 45285 Query 183431 AAGGGGACTTTCAACGCTGGTGCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCACG 183490 |||| || ||| || ||||| ||| | || || || |||| ||||| || ||||||| Sbjct 45286 AAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACATTTGTTGCTCTCCACG 45345 Query 183491 GTGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCTCGCTTGATTGGTA 183550 | || || | || || ||||| ||| | || || |||||||||| || | || Sbjct 45346 GCGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTGTGCGATCTGTTCAAT 45405 Query 183551 TCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATT 183588 | || ||||| ||||| || || ||||||||||| ||| Sbjct 45406 TGCGACCTTATAATGCAATCGCATTCTCTGGTCCAATT 45443 >seq369 Length=444201 Score = 159 bits (176), Expect = 4e-34 Identities = 226/318 (71%), Gaps = 0/318 (0%) Strand=Plus/Plus Query 183805 TATGAAGATGGAGAACAAGCAAACACATTCAAGGCATTTGATTCCACTCAAGAAGAAGAG 183864 |||| |||||| || ||||||||||| || ||| | | ||||||| ||||| Sbjct 342748 TATGGAGATGGTGATGGTGCAAACACATTTCGTGCTTTTAACCCAACTCAAGCCGAAGAA 342807 Query 183865 ACGTATTCTATGGTTACAGCGAATCGTTTCTGGTCACAAATCTTCGGGGTTGCGTTTAGC 183924 || ||||| ||||| || || || || || ||||| |||||||| ||||||| ||| | Sbjct 342808 ACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTTGGGTTGCTTTTTCC 342867 Query 183925 AATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCT 183984 | ||| |||||||| || ||||||||||| ||||| || || | || | ||| | | Sbjct 342868 ATTAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGCTTATGGATGAGT 342927 Query 183985 TCTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGATTTTGTAAGTCAAGAG 184044 || |||| | |||| || |||||||| || ||||| |||| || || || || Sbjct 342928 GCTCTTGGAGTAGTTGGTCTGGCTCTTAACCTACGTGCCCATGACTTCGTTTCCCAGGAA 342987 Query 184045 ATCAGAGCAGCAGAAGATCCAGAATTTGAGACGTTCTACACAAAGAACATACTTCTTAAT 184104 ||| | ||||| ||||||| || ||| |||| ||||||| || || || || | || Sbjct 342988 ATCCGTGCAGCGGAAGATCTTGATTTTAAGACTGTCTACACCAAAAATATTGTTTTAAAC 343047 Query 184105 GAAGGACTACGTGCATGG 184122 | || | ||||| ||| Sbjct 343048 TATGGTATTCGTGCTTGG 343065 >seq7993 Length=73198 Score = 149 bits (164), Expect = 8e-31 Identities = 181/247 (73%), Gaps = 0/247 (0%) Strand=Plus/Plus Query 183732 GATGGGAGTTGCTGGTATACTAGGAGGAGCACTACTCAGTGCTATCCATGGTGTCACAGT 183791 |||||||||||| || || | || | || || || | | ||| ||||||| || || Sbjct 57160 GATGGGAGTTGCCAGTGTATTGGGTGCGGCTCTGCTATGCGTTATTCATGGTGCTACCGT 57219 Query 183792 AGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTCAAGGCATTTGATTCCAC 183851 ||||||||| || | ||||||||| || ||||| ||||| | ||| | | || Sbjct 57220 AGAGAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTTCGTGTTTTTAACTTAAC 57279 Query 183852 TCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGTTTCTGGTCACAAATCTTCGG 183911 ||||| ||||| || ||||| ||||| || || |||| || |||| |||||||| | Sbjct 57280 TCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAATCACTTTTGGTACCAAATCTTTGA 57339 Query 183912 GGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATGGG 183971 |||||| ||| |||||| |||||||| || ||||||||||| ||||| | ||| | || Sbjct 57340 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACTTGTAACCGG 57399 Query 183972 TCTTTGG 183978 | | ||| Sbjct 57400 TTTATGG 57406 >seq695 Length=285002 Score = 149 bits (164), Expect = 8e-31 Identities = 320/474 (68%), Gaps = 7/474 (1%) Strand=Plus/Minus Query 181818 AACAATCGTCTCTATGTCGGTTGGTTTGGTGTGCTGATGATCCCAACTCTGTTGGCGGCA 181877 || |||||||| ||| || | ||||||| ||| | |||||||| || | ||| | ||| Sbjct 41120 AAAAATCGTCTTTATATCAGATGGTTTGTTGTTTTAATGATCCCTACCTTATTGACCGCA 41061 Query 181878 ACCATCTGTTTCATCGTTGCTTTCGTAGCAGCACCTCCTGTCGATATCGACGGTATCCGC 181937 || | | || || | | || | || || | || | ||||| || ||||| || Sbjct 41060 ACTTTTTTATTTATTATCGTCTTTATTGCTGCTCTTCTAATAGATATTGATGGTATTCGT 41001 Query 181938 GAACCCGTAGCTGGTTCACTCATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCA 181997 ||||| | |||| || || | || || ||||| || || ||||||| || | | Sbjct 41000 GAACCTATTTCTGGATCTCTACTTTACGGAAACAAAATTATTTCTGGTGTCATTATTCTT 40941 Query 181998 TCCTCCAACGCAATTGGTCTTCACTTCTACCCAATCTGGGAAGCTGCCTCACTTGATGAG 182057 | || | |||||| | | ||| |||| ||||||||||| || || ||||||| Sbjct 40940 ACTTCTGTAGTTATTGGTTTGCTCTTTTACCAGATCTGGGAAGCGGCATCCGTTGATGAA 40881 Query 182058 TGGCTGTATAACGGTGGTCCTTTCCAACTGGTTGTTTTCCACTTCCTGATCGGCATCTAC 182117 ||| | || || || ||||||| | | ||||||| |||||| | | || | || Sbjct 40880 TGG-TATACAATGGCGGTCCTTATGAGTTAATTGTTTTACACTTCTTACTTGG--TGTA- 40825 Query 182118 GC---CTACATGGGACGTGAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCCTGGATC 182174 || ||||| || ||||||| ||||||| || || ||||||||| || ||||| Sbjct 40824 GCTTGTTACATAGGTCGTGAGTTGGAACTTAGTTTCCATCTAGGTATGCACCCTTGGATT 40765 Query 182175 TGTGTAGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCTTAGTCTATCCTTTC 182234 | | ||||| || |||| | || || | || |||| ||||| ||||||| || Sbjct 40764 GCTATTGCATATTCAACTCCTATTGCAGCTACTACTACTGTTTTCTTGATCTATCCAATC 40705 Query 182235 GGTCAAGGTTCGTTCTCCGATGCAATGCCCCTCGGAATCTCAGGAACATTCAAC 182288 |||||||| || || |||| ||||| | |||||||| | || |||||| Sbjct 40704 GGTCAAGGGAATTTTTCTGATGGTATGCCTTTAGGAATCTCTGATACTTTCAAC 40651 >seq1349 Length=219574 Score = 114 bits (126), Expect = 2e-20 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 183467 TCTGGAATTTTGTGGCACTCCACGGTGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGT 183526 |||||| ||||| || ||| |||| || || | || || ||||| || | | || | Sbjct 71376 TCTGGATATTTGTTGCTCTCAACGGCGCTTTCGGACTAATAGGTTTTGTGTTAAGTCAAT 71435 Query 183527 TTGAACTTGCTCGCTTGATTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTA 183586 ||||| ||| || | ||| | ||||| ||||| || || ||||||||||| | Sbjct 71436 TTGAATTTGTGCGATCTATTCAATTGACACCTTATAATGCAATCGCATTCTCTGGTCCAA 71495 Query 183587 TTGCTGTTTTTGTCAGTGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTG 183646 ||||||||||||| ||||||| | || |||||||| ||||||||| || ||||||| Sbjct 71496 TTGCTGTTTTTGTTTCTGTATTCTTGATTTATCCACTAGGTCAGTCTGGTTGATTCTTTG 71555 Query 183647 CACCTAGTTTCGG 183659 | || ||||| || Sbjct 71556 CGCCCAGTTTTGG 71568 >seq800 Length=269375 Score = 104 bits (114), Expect = 3e-17 Identities = 165/232 (71%), Gaps = 5/232 (2%) Strand=Plus/Plus Query 183310 TGGTATACCCATGGACTTGCTTCTTCCTATCTTGAAGG-TGCTAACTTTCTTA-CGGCAG 183367 |||||||| |||||| | || ||||||| | ||||| ||| | ||||||| | || Sbjct 152259 TGGTATACTCATGGATTGGCCAGTTCCTATTTGGAAGGATGCAA--TTTCTTAACCGCCA 152316 Query 183368 CTGTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTGTTACTTTGGGGTCCTGAGT 183427 | || ||||| |||||| | | | | |||||| | ||||||| ||||||||||| Sbjct 152317 CAGTTTCGACTCCTGCTAATAGTTTAGCACATTCTTTATTGTTACTATGGGGTCCTGAAG 152376 Query 183428 CTCAAGGGGACTTTCAACGCTGGTGCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCC 183487 | ||||| || ||| || ||||| ||| | || || | |||| ||||| || ||| Sbjct 152377 CACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTATGTGGACATTTGTTGC-TTCC 152435 Query 183488 ACGGTGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCTCG 183539 |||| | || | || || ||||| ||| | | || ||||||||||| || Sbjct 152436 ACGGCACGTTAGGACTAATAGGTTTTATGTTACATCAATTTGAACTTGCGCG 152487 Score = 89.7 bits (98), Expect = 6e-13 Identities = 148/209 (71%), Gaps = 5/209 (2%) Strand=Plus/Plus Query 183310 TGGTATACCCATGGACTTGCTTCTTCCTATCTTGAAGG-TGCTAACTTTCTTA-CGGCAG 183367 |||||||| |||||| | || ||||||| | ||||| ||| | ||||||| | || Sbjct 151345 TGGTATACTCATGGATTGGCCAGTTCCTATTTGGAAGGATGCAA--TTTCTTAACCGCCA 151402 Query 183368 CTGTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTGTTACTTTGGGGTCCTGAGT 183427 | || ||||| |||||| | | | | |||||| | ||||||| ||||||||||| Sbjct 151403 CAGTTTCGACTCCTGCTAATAGTTTAGCACATTCTTTATTGTTACTATGGGGTCCTGAAG 151462 Query 183428 CTCAAGGGGACTTTCAACGCTGGTGCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCC 183487 | ||||| || ||| || ||||| ||| | || || | |||| ||||| || ||| Sbjct 151463 CACAAGGAGATTTTACTCGTTGGTGTCAATTAGGTGGTATGTGGACATTTGTTGC-TTCC 151521 Query 183488 ACGGTGCCTTTGCTCTCATTGGTTTCATG 183516 |||| | || | || || ||||| ||| Sbjct 151522 ACGGCACGTTAGGACTAATAGGTTTTATG 151550 >seq869 Length=261632 Score = 93.3 bits (102), Expect = 5e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 183582 TCCTATTGCTGTTTTTGTCAGTGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTT 183641 ||| |||||||||||||| |||||| || || |||||||| | ||| ||| ||||| Sbjct 195711 TCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCACTAGATCAATCTGATTGGTT 195770 Query 183642 CTTTGCACCTAGTTTCGGGGTAGCAGCAATCTTTAGATTCCTATTGTTCCTTCAGGGTTT 183701 ||||| || | ||| | ||| ||| || ||| ||||| | | || |||| | || Sbjct 195771 CTTTGTGCCCAATTTTGATGTAAAAGCTATATTTCGATTCATCCTCTTTTTTCAATGATT 195830 Query 183702 CCACAACTGGACGTTAAACCCCTTCCATATGATGGGAGTTGCTG 183745 || || || || || ||| | || ||||||| |||||||||| Sbjct 195831 TCATAATTGAACATTGAACTCATTTTATATGATTGGAGTTGCTG 195874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611103511254400