Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hibiscus_20syriacus_20[genbank_20GCA_5F001696755.1_202016-07-29]
77,488 sequences; 1,748,252,795 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq461 118 1e-21
seq17672 113 5e-20
seq6613 111 2e-19
seq7492 107 2e-18
seq6788 107 2e-18
seq1617 107 2e-18
seq9751 105 8e-18
seq7334 104 3e-17
seq2034 102 1e-16
seq6480 98.7 1e-15
seq6183 98.7 1e-15
seq1980 98.7 1e-15
seq4303 96.9 4e-15
seq2374 96.9 4e-15
seq12078 91.5 2e-13
seq10024 87.8 2e-12
seq2164 84.2 3e-11
>seq461
Length=318114
Score = 118 bits (130), Expect = 1e-21
Identities = 231/338 (68%), Gaps = 10/338 (3%)
Strand=Plus/Plus
Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374
|| || || ||||||||||| || ||| || || || |||||| | ||| ||||||
Sbjct 35982 CCTGGAACTGGAAAGACCCTTCTTGCCAAGGCAATTGCTGGTGAAGCTGGTGTGCCATTC 36041
Query 175375 ATC--CAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGG 175432
|| || | || | | | ||||| || |||||||||||||| |||||| | |
Sbjct 36042 TTCTCCATT--TCAGGTTCCGAGTTTGTTGAAATGTTTGTTGGTGTCGGTGCCTCTCGAG 36099
Query 175433 TTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGA 175492
|||| ||||| || | | ||| |||||| ||||||||||| || | ||||| |
Sbjct 36100 TTCGTGATCTTTTCAAGAAGGCCAAGGAAAATGCCCCATGTATTGTATTTGTGGATGAAA 36159
Query 175493 TTGATGCGGTGGGCAAGCAACGCAGCGCTGGT---GGTATGCCAGCAAATGACGAGAGAG 175549
||||||| || || ||| | | ||||| ||| || ||||| ||||| |
Sbjct 36160 TTGATGCTGTTGGACGACAAAGAGGAACTGGTATCGGT---GGAGGGAATGATGAGAGGG 36216
Query 175550 AACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGGCATTG 175609
| ||||| ||||||| || | || || |||||||||||||| | | || || |||
Sbjct 36217 AGCAAACTCTTAATCAGCTTTTGACTGAAATGGATGGCTTTGAGGGTAACACGGGTATTA 36276
Query 175610 TGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGAT 175647
| || |||| || ||||| | | || || ||||||
Sbjct 36277 TCGTAGTTGCTGCAACTAACAGGGCTGACATTCTTGAT 36314
>seq17672
Length=10974
Score = 113 bits (124), Expect = 5e-20
Identities = 227/335 (68%), Gaps = 4/335 (1%)
Strand=Plus/Plus
Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374
|| || || |||||||| || || ||| || || || |||||| | || ||||||
Sbjct 5480 CCTGGAACTGGAAAGACTCTTCTTGCCAAGGCAATTGCCGGTGAAGCTGGCGTGCCATTC 5539
Query 175375 ATC--CAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGG 175432
|| || | || | | | || || || |||||||||||||| |||||| | |
Sbjct 5540 TTCTCCATT--TCAGGTTCTGAGTTCGTTGAAATGTTTGTTGGTGTCGGTGCCTCTCGAG 5597
Query 175433 TTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGA 175492
|||| ||||| ||| | | ||| || ||| |||||||||||||| | ||||| |
Sbjct 5598 TTCGTGATCTTTTTAAGAAGGCCAAGGAGAATGCCCCATGTATTGTCTTTGTGGATGAAA 5657
Query 175493 TTGATGCGGTGGGCAAGCAACGCAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGAAC 175552
||||||| || || ||| | | ||||| | || ||||| ||||| || |
Sbjct 5658 TTGATGCTGTTGGACGACAAAGAGGAACTGGTATTGGTGGAGGGAATGATGAGAGGGAGC 5717
Query 175553 AAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGGCATTGTGG 175612
|||| ||||||| || | || || |||||||| ||||| | | || || ||| | |
Sbjct 5718 AAACTCTTAATCAGCTTTTGACTGAAATGGATGGTTTTGAGGGTAACACGGGTATTATCG 5777
Query 175613 TTATTGCGGCCACTAATCGCGTGGATATCCTTGAT 175647
| ||||| || ||||| | | || || ||||||
Sbjct 5778 TAATTGCCGCAACTAACAGGGCTGACATTCTTGAT 5812
>seq6613
Length=80294
Score = 111 bits (122), Expect = 2e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 75128 CGGGACTATGATTTTGGTTACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCA-ACG 75186
||||||| ||| | || ||| |||||| ||||||| ||||||| | ||| || | |
Sbjct 46186 CGGGACTTTGACTATGATTATTTTGGTTTCAAAACTCTTGAGAGGTCCTACCTCCTGAAA 46245
Query 75187 GCTCGATGGCATCCTCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCAT 75246
| || | || | |||| |||| || || ||||||| ||| |||| ||| | || ||
Sbjct 46246 GTTCAAGGGAAGG-TCATAGAAAGGCCTCAACACATGTTAATGAGGGTTGCAGTTGGAAT 46304
Query 75247 CCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTT 75306
||| ||| ||||||||||||| | | || || ||| |||||| ||| | |||
Sbjct 46305 CCATAAGGATGACATTGATTCTGCTATAAAAACTTATCACATGATGTCTCAAAGATGGTT 46364
Query 75307 CATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCA 75354
|| ||| || | || || || ||||||||||| || |||||||| ||
Sbjct 46365 CACTCATGCTTCCCCCACACTTTTCAATGCTGGAACTCCAAGACCTCA 46412
>seq7492
Length=70955
Score = 107 bits (118), Expect = 2e-18
Identities = 192/280 (69%), Gaps = 8/280 (3%)
Strand=Plus/Plus
Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374
|| ||||| |||||||| || | || |||| | || || ||| | || || ||
Sbjct 1471 CCCGGTACTGGAAAGACTCTATTGGCGAGAGCTGTAGCAGGAGAAGCCGGGGTACCGTTT 1530
Query 175375 ATCCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTT 175434
|| ||| |||| || | ||||| ||| |||| |||||||| ||||| |||||
Sbjct 1531 TTCTCATGCGCTGCTTCAGAGTTTGTTGAGTTGTTCGTTGGTGTTGGTGCATCGAGGGTA 1590
Query 175435 CGCGATCTCTTTGAAATCGCCCGCGAAAATCAA----CCATGTATTGTCTTCATTGATGA 175490
| ||| | || || | || ||| ||| || || ||||| |||||||||||
Sbjct 1591 AGGGATTTATTCGATAAGGC----GAAGTCCAAGGCGCCTTGCATTGTGTTCATTGATGA 1646
Query 175491 GATTGATGCGGTGGGCAAGCAACGCAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGA 175550
||||||||| || || | ||| | | |||||| | | |||||| ||||||||
Sbjct 1647 GATTGATGCTGTTGGGAGACAAAGAGGAGCTGGTCTTGGAGGTGGAAATGATGAGAGAGA 1706
Query 175551 ACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTT 175590
|||||||| |||||| | | || ||||||||||| |||
Sbjct 1707 GCAAACAATCAATCAATTGTTGACTGAGATGGATGGGTTT 1746
>seq6788
Length=77562
Score = 107 bits (118), Expect = 2e-18
Identities = 299/454 (66%), Gaps = 6/454 (1%)
Strand=Plus/Plus
Query 75128 CGGGACTATGATTTTGGTTACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTC--AAC 75185
||||||| ||| | || ||| |||||| ||||||||||||||| | ||| |||| ||
Sbjct 8631 CGGGACTTTGACTATGATTATTTTGGTTTCAAAACCCTTGAGAGGTCCTACCTTCTGAAA 8690
Query 75186 GGCTCGATGGCATCCTCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCA 75245
| || | || | | || |||| || || ||||||| ||| ||| ||| | || |
Sbjct 8691 G--TCCAAGGGAAGGTTATAGAAAGGCCTCAACACATGTTAATGAGGGATGCAGTTGGAA 8748
Query 75246 TCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGT 75305
| || ||| ||||||| ||||| | | | || ||| |||||| ||| | ||
Sbjct 8749 TTCATAAGGATGACATTGGTTCTGCTATAAAATCTTATCACATGATGTCTCAAAGAGGGT 8808
Query 75306 TCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTT 75365
||| ||| || | || || | ||||||||||| || |||||||| || || ||| |
Sbjct 8809 TCACTCATGCTTCTCCCACATTTTTCAATGCTGGAACTCCAAGACCTCAATTGAGCAGCT 8868
Query 75366 GCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGT 75425
||||| | | || || | ||| | | || || |||| ||| | | |||||
Sbjct 8869 GCTTCTTGTTGTGCATGAAAAATGACAGTGTTGAGGGAATATATGACACTTTGAAGGAGT 8928
Query 75426 GTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACA-TCCATGATGTGAGAGCC 75484
|||| ||| || | ||||| || ||||| | | || | || || | |||
Sbjct 8929 GTGCTATCATCAGCAAATCAGCTGGAGGGATTGGTGT-CTCAGTTCACAATATTCGAGGT 8987
Query 75485 AATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGC 75544
| | |||||| || | ||||||| ||| |||| ||| |||||||| | ||
Sbjct 8988 ATGGGCAGTTATATTCGTGGAATAAATGGTACATCTAATGGCATTGTTCCAATGTTGCGG 9047
Query 75545 GTATTTAACGCCACAGCGCGCTATGTAAATCAAG 75578
|| || || | || || || ||||| ||||||
Sbjct 9048 GTGTTCAATGACATTGCTCGTTATGTTGATCAAG 9081
>seq1617
Length=204607
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 75128 CGGGACTATGATTTTGGTTACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCA-ACG 75186
||||||| ||| | || ||||||||| ||||||| ||||||| | |||||| | |
Sbjct 198003 CGGGACTTTGACTATGATTACTTTGGCTTCAAAACTCTTGAGAGGTCCTATCTCCTGAAA 197944
Query 75187 GCTCGATGGCATCCTCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCAT 75246
| || | || | || || |||| || ||| ||||||| ||| |||| || | || ||
Sbjct 197943 GTTCAAGGGAAGGCT-ATAGAAAGGCCTCAGCACATGTTAATGAGGGTTGCTGTTGGAAT 197885
Query 75247 CCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTT 75306
||| ||| ||||||||||||| | | || || ||| |||||| ||| | |||
Sbjct 197884 TCACAAGGATGACATTGATTCTGCTATAAAAACTTATCACATGATGTCTCAAAGGTGGTT 197825
Query 75307 CATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCA 75354
|| || || | || || || ||||||||||| || ||||| || ||
Sbjct 197824 CACCCATGCTTCTCCCACACTTTTCAATGCTGGAACTCCAAGGCCTCA 197777
>seq9751
Length=50749
Score = 105 bits (116), Expect = 8e-18
Identities = 158/222 (71%), Gaps = 3/222 (1%)
Strand=Plus/Plus
Query 64996 GCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC 65055
||||| |||| || || ||| | | || ||||| | ||||| ||||||||| | ||
Sbjct 49086 GCCATTGAAACGGTGCCGTGTGTGGCTAAAAAGGCCGAGTGGGCCATGAAATGGATCAAC 49145
Query 65056 ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTC 65115
| | || ||||||||||| | | || ||||| || || ||||| |||||
Sbjct 49146 GGAG-GAGAAACT--TTCGCCGAGCGGTTGATCGCCTTTGCTTGCGTCGAGGGGATCTTT 49202
Query 65116 TTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTA 65175
|||||||| |||||||| || | |||||||| ||||| ||| | ||||| || ||
Sbjct 49203 TTCTCCGGAAGTTTCTGCGCCATATTCTGGTTGAAAAAGCGCGGTTTAATGCCCGGATTA 49262
Query 65176 TGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217
|||||||| || | || || ||||| ||||||||||||
Sbjct 49263 ACTTTCTCAAACGAGTTAATATCGCGAGACGAGGGTCTCCAC 49304
>seq7334
Length=105305
Score = 104 bits (114), Expect = 3e-17
Identities = 162/229 (71%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 75128 CGGGACTATGATTTTGGTTACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTC--AAC 75185
||||||| ||| | || ||| |||||| ||||||||||||||| | ||| || | ||
Sbjct 98383 CGGGACTTTGACTATGATTATTTTGGTTTCAAAACCCTTGAGAGGTCCTACCTCCTGAAA 98324
Query 75186 GGCTCGATGGCATCCTCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCA 75245
| || | || | | | |||| || || ||||||| ||| |||| ||| | || |
Sbjct 98323 G--TCCAAGGGAAGGTTA--GAAAGGCCTCAACACATGTTAATGAGGGTTGCAGTTGGAA 98268
Query 75246 TCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGT 75305
| || ||| ||||||||||||| | | || || ||| |||||| ||| | ||
Sbjct 98267 TTCATAAGGATGACATTGATTCTGCTATAAAAACTTATCACATGATGTCTCAAAGATGGT 98208
Query 75306 TCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCA 75354
||| ||| || | || || || ||||||||||| || |||||||| ||
Sbjct 98207 TCACTCATGCTTCTCCCACACTTTTCAATGCTGGAACTCCAAGACCTCA 98159
>seq2034
Length=191459
Score = 102 bits (112), Expect = 1e-16
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 75128 CGGGACTATGATTTTGGTTACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCA-ACG 75186
||||||| ||||| || ||||||||| ||||||| ||||||| | |||||||| |
Sbjct 144849 CGGGACTTTGATTATGATTACTTTGGCTTCAAAACTCTTGAGAGGTCCTATCTTCTGAAA 144790
Query 75187 GCTCGATGGCATCCTCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCAT 75246
| || | || | | || |||| || ||| ||||||| ||| | || || | || ||
Sbjct 144789 GTTC-AGGGGAAGGTTATAGAAAGGCCTCAGCACATGTTGATGAGAGTTGCTGTTGGAAT 144731
Query 75247 CCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTT 75306
|| ||| ||||||| ||||| || | || || ||| |||||| ||| | |||
Sbjct 144730 TCATAAGGATGACATTGGTTCTGCTATGAAAACTTATCACATGATGTCTCAAAGATGGTT 144671
Query 75307 CATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCA 75354
| ||| || | || || || ||||||||||| || ||||| || ||
Sbjct 144670 TACTCATGCGTCTCCCACACTTTTCAATGCTGGAACTCCAAGGCCTCA 144623
>seq6480
Length=82479
Score = 98.7 bits (108), Expect = 1e-15
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 75128 CGGGACTATGATTTTGGTTACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCT-TCAACG 75186
||||||| ||| | || ||||||||| ||||||||||||| | | |||||| | | |
Sbjct 7263 CGGGACTTTGACTATGATTACTTTGGCTTCAAAACCCTTGAAAGGTCCTATCTCTTGAAG 7204
Query 75187 GCTCGATGGCATCCTCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCAT 75246
| || | || | || || |||| || || ||||||| ||| | || || | || ||
Sbjct 7203 GTTCAAGGGAAGGCT-ATAGAAAGGCCTCAACACATGTTAATGAGAGTTGCCGTTGGAAT 7145
Query 75247 CCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTT 75306
||| ||| || |||||||||| | | || || | | |||||| ||| | |||
Sbjct 7144 CCATAAGGATGATATTGATTCTGCTGTAAAAACTTATCATATGATGTCTCAAAGATGGTT 7085
Query 75307 CATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCA 75354
|| ||| || | || || || ||||||||||| || ||||| || ||
Sbjct 7084 CACTCATGCTTCTCCCACACTTTTCAATGCTGGAACTCCAAGGCCTCA 7037
>seq6183
Length=87118
Score = 98.7 bits (108), Expect = 1e-15
Identities = 190/280 (68%), Gaps = 8/280 (3%)
Strand=Plus/Minus
Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374
|| ||||| |||||||| || | || |||| | || || ||| | || || ||
Sbjct 46697 CCTGGTACCGGAAAGACTCTATTGGCGAGAGCAGTAGCAGGAGAAGCCGGGGTACCGTTT 46638
Query 175375 ATCCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTT 175434
|| ||| |||| || | ||||||||| |||| || ||||| ||||| || ||
Sbjct 46637 TTCTCATGCGCTGCTTCAGAGTTTGTGGAGTTGTTCGTCGGTGTAGGTGCTTCCAGAGTA 46578
Query 175435 CGCGATCTCTTTGAAATCGCCCGCGAAAATCAA----CCATGTATTGTCTTCATTGATGA 175490
| ||| | || || | || |||| || || || ||||| |||||||||||
Sbjct 46577 AGGGATTTATTCGATAAGGC----GAAATCGAAGGCGCCTTGCATTGTATTCATTGATGA 46522
Query 175491 GATTGATGCGGTGGGCAAGCAACGCAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGA 175550
||||||||| || || | ||| | | |||||| | | |||||| ||||||||
Sbjct 46521 GATTGATGCTGTTGGGAGACAAAGAGGAGCTGGTCTTGGAGGTGGAAATGATGAGAGAGA 46462
Query 175551 ACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTT 175590
|||||||| ||||| | | || ||||||||||| |||
Sbjct 46461 GCAAACAATCAATCAGTTGTTGACTGAGATGGATGGGTTT 46422
>seq1980
Length=193800
Score = 98.7 bits (108), Expect = 1e-15
Identities = 190/280 (68%), Gaps = 8/280 (3%)
Strand=Plus/Minus
Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374
|| ||||| |||||||| || | || |||| | || || ||| | || || ||
Sbjct 66034 CCTGGTACTGGAAAGACACTATTGGCGAGAGCTGTAGCAGGAGAAGCTGGCGTACCGTTT 65975
Query 175375 ATCCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTT 175434
|| ||| |||| | | ||||| ||| ||||||| ||||| ||||| || ||
Sbjct 65974 TTCTCATGCGCTGCTTCGGAGTTTGTCGAGTTGTTTGTCGGTGTCGGTGCATCGAGAGTA 65915
Query 175435 CGCGATCTCTTTGAAATCGCCCGCGAAAATCAA----CCATGTATTGTCTTCATTGATGA 175490
| ||| | || || | || |||| ||| || || ||||| |||||||||||
Sbjct 65914 AGGGATTTATTCGATAAGGC----GAAATCCAAGGCGCCTTGCATTGTGTTCATTGATGA 65859
Query 175491 GATTGATGCGGTGGGCAAGCAACGCAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGA 175550
||||||||| || || | ||| | | |||||| | | |||||| ||||||||
Sbjct 65858 GATTGATGCTGTTGGGAGACAAAGAGGAGCTGGTCTTGGAGGTGGAAATGATGAGAGAGA 65799
Query 175551 ACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTT 175590
|||||||| ||||| | | || ||||||||||| |||
Sbjct 65798 GCAAACAATCAATCAGTTGTTGACTGAGATGGATGGGTTT 65759
>seq4303
Length=114645
Score = 96.9 bits (106), Expect = 4e-15
Identities = 239/363 (66%), Gaps = 0/363 (0%)
Strand=Plus/Minus
Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374
|| || || ||||||||||| |||||| || || || |||||| | ||| || |||
Sbjct 60056 CCTGGAACTGGAAAGACCCTTCTCGCCAAGGCAATTGCTGGTGAAGCTGGTGTGCCGTTC 59997
Query 175375 ATCCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTT 175434
|| || | | | ||||| || |||||||||||||| |||||| | |||
Sbjct 59996 TTCTCTATTTCAGGTTCCGAGTTTGTTGAAATGTTTGTTGGTGTCGGTGCCTCTCGAGTT 59937
Query 175435 CGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATT 175494
|| ||||| || | | ||| || ||| ||||| || ||||| | ||||| |||
Sbjct 59936 CGTGATCTTTTCAAGAAGGCCAAGGAGAATGCCCCATGCATCGTCTTTGTGGATGAAATT 59877
Query 175495 GATGCGGTGGGCAAGCAACGCAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGAACAA 175554
||||| || || ||| | | ||||| | || ||||| ||||| || |||
Sbjct 59876 GATGCTGTTGGACGACAAAGAGGAACTGGTATTGGTGGAGGGAATGATGAGAGGGAGCAA 59817
Query 175555 ACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGGCATTGTGGTT 175614
|| | || || || | ||||| |||||||| || || | | || || || | ||
Sbjct 59816 ACTCTCAACCAGCTTTTGACCGAAATGGATGGTTTCGAGGGTAACACAGGTATCATCGTG 59757
Query 175615 ATTGCGGCCACTAATCGCGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGTCGTTTT 175674
||||| || || || | | || || |||||| ||||| | | || || || |||
Sbjct 59756 ATTGCAGCAACCAACAGGGCCGACATTCTTGATTCTGCCCTATTGAGGCCAGGACGGTTT 59697
Query 175675 GAT 175677
|||
Sbjct 59696 GAT 59694
>seq2374
Length=163246
Score = 96.9 bits (106), Expect = 4e-15
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 75128 CGGGACTATGATTTTGGTTACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCA--AC 75185
||||||| ||| | || ||||||||| ||||||| ||||||| | |||||| || |
Sbjct 2102 CGGGACTTTGACTATGATTACTTTGGCTTCAAAACTCTTGAGAGGTCCTATCT-CATGAA 2160
Query 75186 GGCTCGATGGCATCCTCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCA 75245
| || | || | |||| |||| || ||| ||||||| ||| |||| || | || |
Sbjct 2161 AGTTCAAGGGAAAG-TCATAGAAAGGCCTCAGCACATGTTAATGAGGGTTGCTGTTGGAA 2219
Query 75246 TCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGT 75305
| || ||| | |||||||||| | | || || ||| |||||| ||| | ||
Sbjct 2220 TTCATAAGGATTATATTGATTCTGCTATAAAAACTTATCACATGATGTCTCAAAGATGGT 2279
Query 75306 TCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCA 75354
||| ||| || | || || || ||||||||||| || ||||| || ||
Sbjct 2280 TCACTCATGCTTCTCCCACACTTTTCAATGCTGGAACTCCAAGGCCTCA 2328
>seq12078
Length=35335
Score = 91.5 bits (100), Expect = 2e-13
Identities = 115/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 65071 TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTC 65130
||||||||||| | | || ||||| || | ||||| ||||| ||||| || |||
Sbjct 4451 TTCGCCGAGCGGTTGATAGCTTTTGCTTGCATTGAGGGGATCTTTTTCTCTGGAAGTTTC 4510
Query 65131 TGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAA 65190
||||| || | ||||||||| ||||| || | ||||| || || |||||||| ||
Sbjct 4511 TGCGCCATATTTTGGTTGAAAAAGCGCGGGTTGATGCCTGGATTAACTTTCTCAAACGAG 4570
Query 65191 CTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228
| || || |||||||| || |||||| || |||||
Sbjct 4571 TTAATCTCGCGAGATGAAGGCCTCCACTGCGATTTTGC 4608
>seq10024
Length=53621
Score = 87.8 bits (96), Expect = 2e-12
Identities = 114/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 65071 TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTC 65130
||||||||||| | | || ||||| || | ||||| || || ||||| || |||
Sbjct 14837 TTCGCCGAGCGGTTGATCGCTTTTGCTTGCATTGAGGGGATATTTTTCTCTGGAAGTTTC 14896
Query 65131 TGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAA 65190
||||| || | ||||||||| ||||| || | ||||| || || ||||| |||||
Sbjct 14897 TGCGCCATATTTTGGTTGAAAAAGCGCGGGTTAATGCCTGGATTAACTTTCTCCAATGAG 14956
Query 65191 CTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228
| || || |||||||| || |||||| || |||||
Sbjct 14957 TTAATCTCGCGAGATGAAGGCCTCCACTGCGATTTTGC 14994
>seq2164
Length=171303
Score = 84.2 bits (92), Expect = 3e-11
Identities = 222/336 (66%), Gaps = 5/336 (1%)
Strand=Plus/Plus
Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374
|| || || ||||||||||| || ||| || || || |||||| | || ||||||
Sbjct 3154 CCTGGAACTGGAAAGACCCTTCTTGCCAAGGCAATTGCTGGTGAAGCTGGAGTGCCATTC 3213
Query 175375 ATC--CAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAG-G 175431
|| || | || | | | ||||| || |||||||||||||| |||||| | |
Sbjct 3214 TTCTCCATT--TCAGGTTCCGAGTTTGTTGAAATGTTTGTTGGTGTCGGTGCCTCTCGAG 3271
Query 175432 GTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAG 175491
|||| ||||| || | | ||| || ||| ||||| |||||||| | |||||
Sbjct 3272 TTTCGTGATCTTTTCAAGAAGGCCAAGGAGAATGCCCCATGCATTGTCTTTGTGGATGAA 3331
Query 175492 ATTGATGCGGTGGGCAAGCAACGCAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGAA 175551
|||||||| || || |||| | | ||||| | || ||||| ||||| ||
Sbjct 3332 ATTGATGCTGTTGGACGGCAAAGAGGAACTGGTATTGGTGGAGGGAATGATGAGAGGGAG 3391
Query 175552 CAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGGCATTGTG 175611
||||| | || | || | || || |||||||| || || | | || || || |
Sbjct 3392 CAAACTCTCAAATAGCTTTTGACTGAAATGGATGGTTTCGAGGGTAACACAGGTATCATC 3451
Query 175612 GTTATTGCGGCCACTAATCGCGTGGATATCCTTGAT 175647
|| ||||| || || || | | || || ||||||
Sbjct 3452 GTAATTGCAGCAACCAACAGGGCCGACATTCTTGAT 3487
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595991762685440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |