Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hibiscus_20syriacus_20[genbank_20GCA_5F001696755.1_202016-07-29] 77,488 sequences; 1,748,252,795 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq2693 286 4e-72 seq5102 239 5e-58 seq3550 223 4e-53 seq31365 217 2e-51 seq695 179 4e-40 seq15646 174 2e-38 seq9889 167 3e-36 seq369 163 3e-35 seq3386 132 5e-26 seq7993 127 2e-24 seq16704 91.5 2e-13 seq817 89.7 6e-13 seq130 86.0 7e-12 >seq2693 Length=259752 Score = 286 bits (316), Expect = 4e-72 Identities = 489/705 (69%), Gaps = 6/705 (1%) Strand=Plus/Minus Query 167329 TTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCTCGCCTGATTGGTATCCGT 167388 |||| || || ||||| ||| | || | ||||||||||| || | || | || Sbjct 245625 TTTGGACTAATAGGTTTTATGTTACGTAAATTTGAACTTGCGCGATTTCTTCAATTGCGA 245566 Query 167389 CCCTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGTCTTCGTTAGCGTTTTCCTTCTC 167448 || || ||||| || | ||||||||||| |||| ||| || ||| || ||| | | Sbjct 245565 CCTTATAATGCAATCGTATTCTCTGGTCCAATTGTTGTTTTTGTTTCTGTATTCTTGGTT 245506 Query 167449 TATCCCCTCGGTCAAAGCAGCTGGTTCTTTGCCCCGTCCTTCGGAGTCGCCGCCATCTTC 167508 ||||| || ||||| | ||||||||||| || || || || || || || || Sbjct 245505 TATCCACTAGGTCAGTCTGGTTGGTTCTTTGCGCCCAATTTTGGTGTAGCAGCTATATTT 245446 Query 167509 CGATTCCTCCTCTTCCTCCAAGGATTCCACAACTGGACACTGAATCCATTTCATATGATG 167568 ||||| ||||||| |||||||||| || || |||||| ||||||||||||||||||| Sbjct 245445 AGATTCATCCTCTTTTTCCAAGGATTTCATAATTGGACATCGAATCCATTTCATATGATG 245386 Query 167569 GGTGTAGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCAATCCATGGTGTTACAGTAGAG 167628 || || | || | |||||| || ||||| | || || |||| || ||| |||||| Sbjct 245385 GGAGTTGTCTGTGTATTGGGTGTGGCTTTGCTATGCGCTATTCATGATGCTACCGTAGAG 245326 Query 167629 AATACTTTGTATGAAGATGGTGAGCAAGCAAACACTTTTAAGGCATTCGATTCTACTCAG 167688 | |||||| | |||||||||||| ||||| | ||| || || | | ||||| Sbjct 245325 ATTACTTTATTTGAAGATGGTGATGGTGCAAATAAATTTCGTGCTTTTAACCCAACTCAA 245266 Query 167689 GAAGAAGAGACTTATTCAATGGTTACAGCAAACCGATTCTGGTCTCAGATCTTCGGCATT 167748 | ||||| |||||||||||||| || ||||| || ||||| || ||||| || || Sbjct 245265 GCCGAAGAAACTTATTCAATGGTCGTCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTT 245206 Query 167749 GCTTTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTATTCGTTCCCGTTATGGGACTT 167808 ||| ||| ||||| ||| | ||||||||||||||||| || || | || || Sbjct 245205 -TTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAATAGCTGG--TT 245149 Query 167809 TGGACATCA--TCGATTGGCATCATTGGTCTGGCTCTTAATCTTCGTGCTTACGATTTCG 167866 | | || | | |||| | | ||||||||||| || || |||| || || |||| Sbjct 245148 TATAGATGAGTGCTCTTGGAGTAGTCGGTCTGGCTCTGAACCTACGTGTCTATGACTTCG 245089 Query 167867 TTTCTCAAGAGATCAGAGCGGCGGAGGATCCAGAGTTTGAAACTTTCTATACTAAAAACA 167926 |||| || || || || | | ||||| ||||| |||||||| | ||||| | Sbjct 245088 TTTCCCAGGAAATTTATGCAATGAAAGATCCCACATTTGAGACTTTCTACATCAAAAATA 245029 Query 167927 -TCCTTCTGAATGAAGGTCTTCGAGCATGGTTAGCACCTATCGATCAACCTCATGAGAAC 167985 | || | || |||||| ||| || ||| | || || ||||| |||||||| || Sbjct 245028 TTATTTTTAAACGAAGGTATTCCTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAAA 244969 Query 167986 TTTGTGTTCCCAGAGGAAGTTCTCCCACGAGGCAACGCACTATAA 168030 || | |||| ||||| ||||| || | || ||||| || ||| Sbjct 244968 CTTATATTCCTTGAGGAGGTTCTACCCTGTGGAAACGCTCTTTAA 244924 >seq5102 Length=101622 Score = 239 bits (264), Expect = 5e-58 Identities = 298/406 (73%), Gaps = 2/406 (0%) Strand=Plus/Minus Query 165768 CTTCTGCGAATGGGTTACCAGCACAAATAACCGTCTGTATGTCGGTTGGTTTGGTACGCT 165827 |||||| | ||| | |||||||| | |||||||| || |||| ||||||||| | Sbjct 52338 CTTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTT 52279 Query 165828 GATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTC 165886 |||||| || || | ||| | |||||| |||| || || |||||||||| ||||||| Sbjct 52278 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTC 52220 Query 165887 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACA 165946 | || || || || || || || |||||||| || |||| ||||| | || || |||| Sbjct 52219 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACA 52160 Query 165947 ACATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCA 166006 | || || |||||||| || |||| |||| || || ||| | ||||| || || | Sbjct 52159 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCGA 52100 Query 166007 TCTGGGAAGCCGCATCGCTTGACGAATGGCTCTATAACGGTGGTCCTTTCCAACTGGTTG 166066 |||||||||| ||||| |||| |||||| | || || || ||||||| | | ||| Sbjct 52099 TCTGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGTTAATTG 52040 Query 166067 TCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACTGTCTTACC 166126 | || |||||| | |||| | | ||||||||||||||||||||||| || || Sbjct 52039 TTTTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCC 51980 Query 166127 GTCTAGGTATGCGTCCATGGATCTGTGTTGCTTACTCAGCACCAGT 166172 |||| |||||||| || |||||| |||||| || ||||| || || Sbjct 51979 GTCTGGGTATGCGCCCTTGGATCGCTGTTGCATATTCAGCTCCTGT 51934 >seq3550 Length=137586 Score = 223 bits (246), Expect = 4e-53 Identities = 242/320 (76%), Gaps = 1/320 (0%) Strand=Plus/Minus Query 166436 TCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTGA 166495 |||| ||||| |||||||| || || |||||||| ||||||||||| || || || |||| Sbjct 93203 TCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGA 93144 Query 166496 TCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGGC 166555 |||| | || ||| |||||||| || || || || || |||||| | ||||| | || Sbjct 93143 TCTTTCGGTATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCTGCTTAGC 93084 Query 166556 CTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACG 166615 | || || || ||||||||||| || | || | ||| ||| | |||||||| || | Sbjct 93083 CCGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACCATGACTTTCAACCTAAATG 93024 Query 166616 GTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAG 166675 ||||||| || ||||| | | ||||| |||| |||||||| | || ||| |||| | Sbjct 93023 GTTTCAATTTTAACCAATTTGTAGTTGATAGTCAAGGTCGTGTAATTAATACC-GGGCTG 92965 Query 166676 ATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAACGCACACAACT 166735 || || |||||| ||| | |||||||||||||||||||| | ||| || || |||| Sbjct 92964 ATATTATTAACCATGCTAACTTTGGTATGGAAGTTATGCATGAACTTAAGGCTCATAACT 92905 Query 166736 TCCCCCTCGACCTCGCTGCT 166755 |||| || ||||| |||||| Sbjct 92904 TCCCTCTAGACCTAGCTGCT 92885 >seq31365 Length=1132 Score = 217 bits (240), Expect = 2e-51 Identities = 241/320 (75%), Gaps = 1/320 (0%) Strand=Plus/Minus Query 166436 TCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTGA 166495 |||| ||||| |||||||| || || |||||||| ||||||||||| || | || |||| Sbjct 472 TCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGCCCGATTGA 413 Query 166496 TCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGGC 166555 |||| | || ||| |||||||| || || || || || |||||| | ||||| | || Sbjct 412 TCTTTCGGTATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGCTGCTTAGC 353 Query 166556 CTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACG 166615 | || || || ||||||||||| || | || | ||| ||| | |||||||| || | Sbjct 352 CCGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACCATGACTTTCAACCTAAATG 293 Query 166616 GTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAG 166675 ||||||| || ||||| | | ||||| |||| |||||||| | || ||| |||| | Sbjct 292 GTTTCAATTTTAACCAATTTGTAGTTGATAGTCAAGGTCGTGTAATTAATACC-GGGCTG 234 Query 166676 ATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAACGCACACAACT 166735 || || |||||| ||| | |||||||||||||||||||| | ||| || || |||| Sbjct 233 ATATTATTAACCATGCTAACTTTGGTATGGAAGTTATGCATGAACTTAAGGCTCATAACT 174 Query 166736 TCCCCCTCGACCTCGCTGCT 166755 |||| || ||||| |||||| Sbjct 173 TCCCTCTAGACCTAGCTGCT 154 >seq695 Length=285002 Score = 179 bits (198), Expect = 4e-40 Identities = 323/471 (69%), Gaps = 1/471 (0%) Strand=Plus/Minus Query 165793 AATAACCGTCTGTATGTCGGTTGGTTTGGTACGCTGATGATTCCAACTCTGTTGGCAGCA 165852 || || ||||| ||| || | ||||||| | | ||||| || || | ||| | ||| Sbjct 41120 AAAAATCGTCTTTATATCAGATGGTTTGTTGTTTTAATGATCCCTACCTTATTGACCGCA 41061 Query 165853 ACTATCTGCTTCATCGTCGCCTTCATCGCTGCTCCCCCTGTGGACATCGACGGCATCCGT 165912 ||| | | || || ||| ||| || ||||||| | | || || || || || ||| Sbjct 41060 ACTTTTTTATTTATTATCGTCTTTATTGCTGCTCTTCTAATAGATATTGATGGTATTCGT 41001 Query 165913 GAACCCGTCGCTGGTTCTCTGATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCC 165972 ||||| | |||| ||||| | || || ||||| || || ||||||| || ||| Sbjct 41000 GAACCTATTTCTGGATCTCTACTTTACGGAAACAAAATTATTTCTGGTGTCATTATTCTT 40941 Query 165973 TCTTCCAACGCAATTGGTCTACACTTCTATCCCATCTGGGAAGCCGCATCGCTTGACGAA 166032 |||| | |||||| | | ||| || | ||||||||||| ||||| |||| ||| Sbjct 40940 ACTTCTGTAGTTATTGGTTTGCTCTTTTACCAGATCTGGGAAGCGGCATCCGTTGATGAA 40881 Query 166033 TGGCTCTATAACGGTGGTCCTTTCCAACTGGTTGTCTTCCACTTCCTGATTGGCATCTAT 166092 ||| | || || || ||||||| | | |||| || |||||| | |||| | | Sbjct 40880 TGG-TATACAATGGCGGTCCTTATGAGTTAATTGTTTTACACTTCTTACTTGGTGTAGCT 40822 Query 166093 GCCTACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTAGGTATGCGTCCATGGATCTGT 166152 ||||| |||||||||| |||||| || || ||||||||||| || ||||| | Sbjct 40821 TGTTACATAGGTCGTGAGTTGGAACTTAGTTTCCATCTAGGTATGCACCCTTGGATTGCT 40762 Query 166153 GTTGCTTACTCAGCACCAGTCGCTGCTGCGAGTGCAGTATTCCTAGTATATCCTTTCGGT 166212 |||| || ||| | || | || ||| | | | | || ||| | | ||||| ||||| Sbjct 40761 ATTGCATATTCAACTCCTATTGCAGCTACTACTACTGTTTTCTTGATCTATCCAATCGGT 40702 Query 166213 CAAGGTAGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAACATTCAAC 166263 ||||| | ||| ||||||| ||||| | |||||||| | || |||||| Sbjct 40701 CAAGGGAATTTTTCTGATGGTATGCCTTTAGGAATCTCTGATACTTTCAAC 40651 >seq15646 Length=30608 Score = 174 bits (192), Expect = 2e-38 Identities = 209/284 (74%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 167747 TTGCTTTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTATTCGTTCCCGTTATGGGAC 167806 ||||||| ||| ||||| ||| | ||||||||||||||||| || || || | || Sbjct 24036 TTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTT 23977 Query 167807 TTTGGACATCATCGATTGGCATCATTGGTCTGGCTCTTAATCTTCGTGCTTACGATTTCG 167866 | |||| | |||| | | ||||||||||| || || ||||| || || |||| Sbjct 23976 TATGGATGAGTGCTCTTGGAGTAGTCGGTCTGGCTCTGAACCTACGTGCCTATGACTTCG 23917 Query 167867 TTTCTCAAGAGATCAGAGCGGCGGAGGATCCAGAGTTTGAAACTTTCTATACTAAAAACA 167926 |||| || || ||| | || ||||| ||||| || ||||| |||||||| || ||||| | Sbjct 23916 TTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATA 23857 Query 167927 TCCTTCTGAATGAAGGTCTTCGAGCATGGTTAGCACCTATCGATCAACCTCATGAGAACT 167986 | ||| | || |||||| |||| || ||| | || || ||||| |||||||| ||| Sbjct 23856 TTCTTTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACC 23797 Query 167987 TTGTGTTCCCAGAGGAAGTTCTCCCACGAGGCAACGCACTATAA 168030 || | ||||| ||||| ||||| || || || ||||| || ||| Sbjct 23796 TTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA 23753 Score = 141 bits (156), Expect = 1e-28 Identities = 233/331 (70%), Gaps = 10/331 (3%) Strand=Plus/Minus Query 167047 CGTTTTGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCTATT 167106 ||||| |||||||| || ||||| || || | || ||||| ||| ||| | ||| | Sbjct 24407 CGTTTCGTTTTTGTAGGTTGGTCCGGCCTATTGCTCTTTCCTTGTGCCTATTTCGCTTTA 24348 Query 167107 GGCGGTTGGCTTACTGGGACTACTTTCGTCACGAGTTGGTATACTCATGGACTCGCGTCC 167166 || |||||| |||| || || || || || || ||||||||||||||| | || | Sbjct 24347 GGGGGTTGGTTTACAGGTACAACCTTTGTAACTTCGTGGTATACTCATGGATTGGC---C 24291 Query 167167 AGTT---ATCTTGAGGG-TGCGAACTTTCTTA-CTGCGGCAGTTAGTACTCCAGCAGATT 167221 |||| || | || || ||| | ||||||| | || |||||| ||||| || || Sbjct 24290 AGTTCCTATTTGGAAGGCTGCAA--TTTCTTAACCGCCGCAGTTTCGACTCCTGCTAATA 24233 Query 167222 CTATGGGTCATTCTTTACTTCTTCTATGGGGTCCTGAATCTCAAGGGGATTTCGTCAGGT 167281 | | | |||||||| | | ||||||||||||||| | ||||| ||||| | | Sbjct 24232 GTTTAGCGCATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGTT 24173 Query 167282 GGCTCCAACTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATTG 167341 || ||| | || || || ||| | ||||| || |||||||| || || | || || | Sbjct 24172 GGTGTCAATTAGGCGGTCTGTGGACATTTGTTGCTCTCCACGGCGCTTTCGGACTAATAG 24113 Query 167342 GTTTCATGCTTCGACAGTTTGAACTTGCTCG 167372 |||| ||| | || || ||||||||||| || Sbjct 24112 GTTTTATGTTACGTCAATTTGAACTTGCGCG 24082 >seq9889 Length=72821 Score = 167 bits (184), Expect = 3e-36 Identities = 290/414 (70%), Gaps = 12/414 (3%) Strand=Plus/Plus Query 167014 TTTGATGTCCTCGATGACTGGCTTAAAAGGGATCGTTTTGTTTTTGTTGGCTGGTCTGGA 167073 |||||| | | ||||||||| | ||||| ||||| |||||||| || ||||| || Sbjct 45036 TTTGATATTATGGATGACTGGTTACGTAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGC 45095 Query 167074 CTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTC 167133 || | || ||||| ||| ||| | ||| | || |||||| |||| || || || || Sbjct 45096 CTATTGCTCTTTCCTTGTGCCTATTTCGCTTTAGGGGGTTGGTTTACAGGTACAACCTTT 45155 Query 167134 GTCACGAGTTGGTATACTCATGGACTCGCGTCCAGT---TATCTTG-AGGGTGCGAACTT 167189 || || ||||||||||||||| | | ||||| ||| | | ||| ||| | || Sbjct 45156 GTAACTTCGTGGTATACTCATGGATT---GGCCAGTTCCTATTTGGAAGGCTGC--AATT 45210 Query 167190 TCTT-ACTGCGGCAGTTAGTACTCCAGCAGATTCTATGGGTCATTCTTTACTTCTTCTAT 167248 |||| || || |||||| ||||| || || | | | |||||||| | | |||| Sbjct 45211 TCTTAACCGCCGCAGTTTCGACTCCTGCTAATAGTTTAGCGCATTCTTTGTTGTTACTAT 45270 Query 167249 GGGGTCCTGAATCTCAAGGGGATTTCGTCAGGTGGCTCCAACTTGGGGGACTCTGGGCTT 167308 ||||||||||| | ||||| ||||| | ||| ||| | || || || ||| | | Sbjct 45271 GGGGTCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACAT 45330 Query 167309 TTGTGGCGCTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTG 167368 |||| || |||||||| || || | || || ||||| ||| | || || |||||||||| Sbjct 45331 TTGTTGCTCTCCACGGCGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTTGAACTTG 45390 Query 167369 CTCG-CCTGATTGGTATCCGTCCCTACAATGCTATTGCTTTCTCTGGTCCTATT 167421 || ||| || | || || || ||||| || || ||||||||||| ||| Sbjct 45391 TGCGATCTG-TTCAATTGCGACCTTATAATGCAATCGCATTCTCTGGTCCAATT 45443 >seq369 Length=444201 Score = 163 bits (180), Expect = 3e-35 Identities = 227/318 (71%), Gaps = 0/318 (0%) Strand=Plus/Plus Query 167638 TATGAAGATGGTGAGCAAGCAAACACTTTTAAGGCATTCGATTCTACTCAGGAAGAAGAG 167697 |||| ||||||||| |||||||| ||| || || | | ||||| | ||||| Sbjct 342748 TATGGAGATGGTGATGGTGCAAACACATTTCGTGCTTTTAACCCAACTCAAGCCGAAGAA 342807 Query 167698 ACTTATTCAATGGTTACAGCAAACCGATTCTGGTCTCAGATCTTCGGCATTGCTTTCAGC 167757 |||||||||||||| || || ||||| || ||||| || ||||| | ||||||| | Sbjct 342808 ACTTATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTTGGGTTGCTTTTTCC 342867 Query 167758 AACAAACGCTGGCTTCATTTCTTTATGTTATTCGTTCCCGTTATGGGACTTTGGACATCA 167817 | ||||| ||| | ||||||||||||||||| || || || | || | |||| Sbjct 342868 ATTAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGCTTATGGATGAGT 342927 Query 167818 TCGATTGGCATCATTGGTCTGGCTCTTAATCTTCGTGCTTACGATTTCGTTTCTCAAGAG 167877 | |||| | |||||||||||||||| || ||||| | || |||||||| || || Sbjct 342928 GCTCTTGGAGTAGTTGGTCTGGCTCTTAACCTACGTGCCCATGACTTCGTTTCCCAGGAA 342987 Query 167878 ATCAGAGCGGCGGAGGATCCAGAGTTTGAAACTTTCTATACTAAAAACATCCTTCTGAAT 167937 ||| | || ||||| |||| || ||| | ||| |||| || ||||| || || | || Sbjct 342988 ATCCGTGCAGCGGAAGATCTTGATTTTAAGACTGTCTACACCAAAAATATTGTTTTAAAC 343047 Query 167938 GAAGGTCTTCGAGCATGG 167955 | ||| |||| || ||| Sbjct 343048 TATGGTATTCGTGCTTGG 343065 >seq3386 Length=136654 Score = 132 bits (146), Expect = 5e-26 Identities = 383/589 (65%), Gaps = 24/589 (4%) Strand=Plus/Minus Query 165898 ATCGACGGCATCCGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACAACATCATCTCT 165957 || || || || |||||||| || | | ||||| | || || |||| ||| || | | Sbjct 68000 ATTGATGGTATTCGTGAACCTGTTTTTAGATCTCTACTTTACGGAAACA-CATTATTTTT 67942 Query 165958 GGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCATCTGGGAAGCC 166017 ||||| || ||| |||| || |||||| | || || || || |||| ||| | Sbjct 67941 GGTGCCATTATTCTGACTTCTGCAGCTATTGGTTTGCATTTTTACCCGATCTTAGAATCG 67882 Query 166018 GCATCGCTTGACGAATGGCTCTATAACGGTGGTCCTTTCCAACTGGTTGTCTTCCACTTC 166077 |||| ||||||||||| | | || || |||| || | | |||| || |||||| Sbjct 67881 ACATCCGTTGACGAATGGTTATGCAATGGCGGTCTTTATGAGTTAATTGTTTTACACTTC 67822 Query 166078 CTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTAGGTATG 166137 | |||| | | || |||||||||| ||||||||||| Sbjct 67821 TTACTTGGTGTAGCTTGTTATATGGGTCGTG------------------GTCTAGGTATG 67780 Query 166138 CGTCCATGGATCTGTGTTGCTTACTCAGCACCAGTCGCTGCTGCGAGTGCAGTATTCCTA 166197 || |||||| |||||| || ||| | || || || ||||| | | || ||| || Sbjct 67779 CGCTATTGGATCGCTGTTGCATATTCAACTCCTGTTGCAGCTGCTACCACTGTTTTCTTA 67720 Query 166198 GTATATCCTTTCGGTCAAGGTAG-TTTCTCTGATGCAATGCCACTCGGAATCTCAGGAAC 166256 | ||||| ||| |||||| || ||| ||||||| |||| || ||||||| | || Sbjct 67719 ATCTATCCAATCGATCAAGGAAGTTTTTTCTGATGGTATGCTCCTAAGAATCTCTGTTAC 67660 Query 166257 ATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATCCCTTCCATAT 166316 ||||| | |||| | || ||||| ||||| ||| || | ||||| || || || || Sbjct 67659 TTTCAATTTCATGGTTGTATTCCAGGCTGAACAC---ATCTTTATGCACCCATTTCACAT 67603 Query 166317 GCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACGGAAGTTTGGT 166376 | | || | ||| | ||||| | | | || | || |||||| | |||||| Sbjct 67602 GTTAAGCATAGCTAGTGTATTCGACAACTCCCTATTCAATGTTATGCATGATTCTTTGGT 67543 Query 166377 TACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAGTT 166436 || ||| | | | || | || || ||| |||| || | ||||||| || Sbjct 67542 AACCTCTAGTTTGATCAGGAAAACCACAAAAAATGAATTTATTAATGAAGGTTACAGATT 67483 Query 166437 CGGACAAGA-AGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTT 166484 | | ||||| ||| |||| || || ||| |||| ||||||||||| || Sbjct 67482 CAGTCAAGAGGGAAAAAACTTATAATATCATAGCTGCTCATGGTTATTT 67434 >seq7993 Length=73198 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 167565 GATGGGTGTAGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCAATCCATGGTGTTACAGT 167624 |||||| || || || | |||||| || |||| | | || ||||||| ||| || Sbjct 57160 GATGGGAGTTGCCAGTGTATTGGGTGCGGCTCTGCTATGCGTTATTCATGGTGCTACCGT 57219 Query 167625 AGAGAATACTTTGTATGAAGATGGTGAGCAAGCAAACACTTTTAAGGCATTCGATTCTAC 167684 |||||||||||| | |||||||||||| ||||| || ||| | || | | || Sbjct 57220 AGAGAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTTCGTGTTTTTAACTTAAC 57279 Query 167685 TCAGGAAGAAGAGACTTATTCAATGGTTACAGCAAACCGATTCTGGTCTCAGATCTTCGG 167744 ||| | ||||| |||||||||||||| || || || | || |||| || ||||| | Sbjct 57280 TCAAGCCGAAGAAACTTATTCAATGGTCACCGCTAATCACTTTTGGTACCAAATCTTTGA 57339 Query 167745 CATTGCTTTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTATTCGT 167792 ||||||| ||| ||||| ||| | ||||||||||||||||| || Sbjct 57340 GGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 57387 >seq16704 Length=14366 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 18128 TTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAGGTTCAAAT 18187 |||||||||||||||| || ||||| ||| ||||||| || ||||||||||||||||| Sbjct 12766 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCAAAT 12707 Query 18188 CCTACCTGGGGAG 18200 ||||| ||||||| Sbjct 12706 CCTACTTGGGGAG 12694 >seq817 Length=266615 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 18129 TCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAGGTTCAAATC 18188 ||||||||||||||| || ||||| |||| ||||||| || |||||||||||||||||| Sbjct 220252 TCCTCAGTAGCTCAGAGGTAGAGCGATCGGCTGTTAACTGACTGGTCGTAGGTTCAAATC 220193 Query 18189 CTACCTGGGGAG 18200 |||| |||| || Sbjct 220192 CTACATGGGCAG 220181 >seq130 Length=620044 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 18119 CTCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTA 18178 ||||| | |||||||||| |||||||| ||||| ||| |||||||| || |||||||| Sbjct 47725 CTCCCGTTGTTCCTCAGTAACTCAGCGGTAGAGCGGTCGGCTGTTAATTGACTGGTCGTA 47666 Query 18179 GGTTCAAATCCTACCTG 18195 ||||| |||||||| || Sbjct 47665 GGTTCGAATCCTACTTG 47649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560704375187200