Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hibiscus_20syriacus_20[genbank_20GCA_5F001696755.1_202016-07-29]
77,488 sequences; 1,748,252,795 total letters
Query= NC_021072.1
Length=178807
Score E
Sequences producing significant alignments: (Bits) Value
seq2693 340 2e-88
seq5102 271 9e-68
seq3550 232 8e-56
seq31365 226 3e-54
seq15646 215 6e-51
seq695 199 5e-46
seq369 196 5e-45
seq3386 176 5e-39
seq9889 152 6e-32
seq7993 150 2e-31
seq16704 89.7 6e-13
seq869 89.7 6e-13
seq817 89.7 6e-13
seq130 87.8 2e-12
seq1349 84.2 2e-11
>seq2693
Length=259752
Score = 340 bits (376), Expect = 2e-88
Identities = 500/700 (71%), Gaps = 6/700 (1%)
Strand=Plus/Plus
Query 66586 ATTAAAGTGCATTACCACGGGGCAGAACTTCTTCTGGGAATACAAAGTTTTCATGCGGTT 66645
||||||| || || |||| ||| ||||| || || |||||| || |||||||| || |
Sbjct 244923 ATTAAAGAGCGTTTCCACAGGGTAGAACCTCCTCAAGGAATATAAGTTTTTCATGAGGCT 244982
Query 66646 GATCGATAGGTGCCAACCATGCACGAAGACCTTCATTCAATAG-AATGTTCTTTGTGTAG 66704
|||| || |||| ||| ||| ||| |||||| || || | ||| || || |||||
Sbjct 244983 GATCTTGAGCCGCCATCCAAGCAGGAATACCTTCGTTTAAAAATAATATTTTTGATGTAG 245042
Query 66705 AACGTCTCGAACTCTGGG-TCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGC 66763
|| ||||| || | |||| |||| ||| || || ||||| || |||||||| |
Sbjct 245043 AAAGTCTCAAA-TGTGGGATCTTTCATTGCATAAATTTCCTGGGAAACGAAGTCATAGAC 245101
Query 66764 ACGAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCAAAGACCCATAACAGG 66823
||| ||||| ||||| ||||| | | || | | ||| || | | ||| | ||
Sbjct 245102 ACGTAGGTTCAGAGCCAGACCGACTACTCCAAGAGCACTCATCTATAAACCAGCTATTGG 245161
Query 66824 AACAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAACGCAATACCAAAGATCTG 66883
||||| |||||||||||||| ||||| | |||||| ||| || |||||||| ||
Sbjct 245162 TACAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAA-AACCCCAAAGATTTG 245220
Query 66884 AGACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTTCCTCTTGAGTAGAGTCGAA 66943
||||| |||||||| || |||||||| ||||||||||| ||||||| | || ||
Sbjct 245221 GGACCAAAAGCGGTTAGCGACGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAA 245280
Query 66944 TGCTTTGAAAGTGTTTGCTTGTTCACCATCTTCATACAGAGTATTCTCTACTGTAACACC 67003
|| || | ||||| |||||||||||| | | |||| ||||||| ||| || |
Sbjct 245281 AGCACGAAATTTATTTGCACCATCACCATCTTCAAATAAAGTAATCTCTACGGTAGCATC 245340
Query 67004 ATGAATGGCAGAAAGCAATGCACCACCCAGGATACCTGCTACACCCATCATATGAAACGG 67063
|||||| || | ||||| || |||||| | || | || |||||||||||||| ||
Sbjct 245341 ATGAATAGCGCATAGCAAAGCCACACCCAATACACAGACAACTCCCATCATATGAAATGG 245400
Query 67064 GTTCAAGGTCCAGTTATGGAATCCTTGTAGGAAGAGAAGGAATCGAAAGATTGCTGAGAC 67123
||| | ||||| ||||| |||||||| | ||||| | ||||| ||| || |||| ||
Sbjct 245401 ATTCGATGTCCAATTATGAAATCCTTGGAAAAAGAGGATGAATCTAAATATAGCTGCTAC 245460
Query 67124 CCCGAAAGATGGAGCGAAAAACCAACTCGATTGACCCAGAGGGTAGATGAGAAAGACACT 67183
|| ||| || || || ||||||| || ||||| || || || | | || |||
Sbjct 245461 ACCAAAATTGGGCGCAAAGAACCAACCAGACTGACCTAGTGGATAAACCAAGAATACAGA 245520
Query 67184 AACAAAAACAGCGATAGGACCAGAGAACGCAATAGCATTGTAGGGACGGATACCGATGAG 67243
|||||||||| | || ||||||||||| | || ||||| || || || | | || ||
Sbjct 245521 AACAAAAACAACAATTGGACCAGAGAATACGATTGCATTATAAGGTCGCA-ATTGAAGAA 245579
Query 67244 A-CGTGCCAGTTCAAACTGGCGAAGCATGAAACCAATTAG 67282
| || || |||||||| | || | ||| ||||| |||||
Sbjct 245580 ATCGCGCAAGTTCAAATTTACGTAACATAAAACCTATTAG 245619
>seq5102
Length=101622
Score = 271 bits (300), Expect = 9e-68
Identities = 296/388 (76%), Gaps = 4/388 (1%)
Strand=Plus/Plus
Query 68420 CAACAGGTGCAGAGTATGCAACACAGATCCAAGGACGCATACCAAGACGATAGGAAAGTT 68479
||||||| || || ||||||||| ||||||||| |||||||| ||||| | |||||
Sbjct 51932 CAACAGGAGCTGAATATGCAACAGCGATCCAAGGGCGCATACCCAGACGGAAACTAAGTT 51991
Query 68480 CCCATTCACGTCCCATGTATGCAAAGATACCAATCAGGAAGTGAAAGATTACGAGTTGGA 68539
|||| ||||| |||||||| | | ||||| | |||||| || | | | |
Sbjct 51992 CCCACTCACGACCCATGTAACAAGCTACACCAAGTAAGAAGTGTAAAACAATTAACTCAT 52051
Query 68540 AAGGACCACCATTGTACAACCACTCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGT 68599
||||||| |||||||| ||||| ||||||| || ||| |||||||| || || |||||||
Sbjct 52052 AAGGACCGCCATTGTATAACCATTCATCAACGGATGCCGCTTCCCAGATCGGGTAAAAGT 52111
Query 68600 GAAGACCAATTGCATTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCATACA 68659
| | ||| || || ||| |||||| || ||||||||||| || ||||| || || |
Sbjct 52112 GCAAACCTATAGCTGCAGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAA 52171
Query 68660 GAAGTGAACCAGCAACAGGTTCACGAATACCATCGATGTCCACAGGGGGAGCAGCGATGA 68719
| || || |||| ||||||||||||||||||||| || || || || |||||||| ||||
Sbjct 52172 GTAGAGATCCAGAAACAGGTTCACGAATACCATCAATATCTACTGGAGGAGCAGCAATGA 52231
Query 68720 AGGCGACGATGAA-ACAGATGGTTGCTG-CAAGCAGCGTAGGGATCATCAGGACGCCGAA 68777
|||||| || || ||||| ||||| | ||| || ||||||||||||| || || ||
Sbjct 52232 AGGCGATAATAAATACAGA-AGTTGCGGTCAATAAG-GTAGGGATCATCAAAACACCAAA 52289
Query 68778 CCAACCAACGTAAAGGCGGTTCTCTGTG 68805
||| || | |||||| ||||| || |||
Sbjct 52290 CCATCCGATGTAAAGACGGTTTTCAGTG 52317
>seq3550
Length=137586
Score = 232 bits (256), Expect = 8e-56
Identities = 244/320 (76%), Gaps = 1/320 (0%)
Strand=Plus/Plus
Query 67839 AGCAGCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATACCCAA 67898
|||||| ||||| ||||||||||| || || ||| | |||||||||||||||||||| ||
Sbjct 92885 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCCTTAAGTTCATGCATAACTTCCATACCAAA 92944
Query 67899 ACCAGCGCGGTTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACTATCAAGGAT 67958
||| |||| | || || |||| |||| | || ||| |||||||| |
Sbjct 92945 GTTAGCATGGTTAATAATATCAGCCC-GGTATTAATTACACGACCTTGACTATCAACTAC 93003
Query 67959 AGACTGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAGT 68018
| | ||||| || ||||||||||| |||||||| | ||||||||||| ||| | |||||
Sbjct 93004 AAATTGGTTAAAATTGAAACCATTTAGGTTGAAAGTCATGGTGCTAATACCTAAAGCAGT 93063
Query 68019 GAACCAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAGTTGTT 68078
|||||||||||| || || ||| | ||||| | |||||| || | ||||| || |||||
Sbjct 93064 GAACCAGATACCTACTACGGGCTAAGCAGCTAAGAAGAAATGTAAAGAACGAGAATTGTT 93123
Query 68079 GAACGATGCATACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAATGTTGTA 68138
||| |||||| | ||||||| || || || || ||||| ||||| || || || ||
Sbjct 93124 GAAACTAGCATACCGAAAGATCAATCGGCCAAAATAACCATGAGCAGCTACGATATTATA 93183
Query 68139 AGTCTCTTCTTCTTGACCGA 68158
||| ||||| ||||||||||
Sbjct 93184 AGTTTCTTCCTCTTGACCGA 93203
>seq31365
Length=1132
Score = 226 bits (250), Expect = 3e-54
Identities = 243/320 (76%), Gaps = 1/320 (0%)
Strand=Plus/Plus
Query 67839 AGCAGCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATACCCAA 67898
|||||| ||||| ||||||||||| || || ||| | |||||||||||||||||||| ||
Sbjct 154 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCCTTAAGTTCATGCATAACTTCCATACCAAA 213
Query 67899 ACCAGCGCGGTTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACTATCAAGGAT 67958
||| |||| | || || |||| |||| | || ||| |||||||| |
Sbjct 214 GTTAGCATGGTTAATAATATCAGCCC-GGTATTAATTACACGACCTTGACTATCAACTAC 272
Query 67959 AGACTGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAGT 68018
| | ||||| || ||||||||||| |||||||| | ||||||||||| ||| | |||||
Sbjct 273 AAATTGGTTAAAATTGAAACCATTTAGGTTGAAAGTCATGGTGCTAATACCTAAAGCAGT 332
Query 68019 GAACCAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAGTTGTT 68078
|||||||||||| || || ||| | ||||| | |||||| || | ||||| || |||||
Sbjct 333 GAACCAGATACCTACTACGGGCTAAGCAGCTAAGAAGAAATGTAAAGAACGAGAATTGTT 392
Query 68079 GAACGATGCATACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAATGTTGTA 68138
||| |||||| | ||||||| || | || || ||||| ||||| || || || ||
Sbjct 393 GAAACTAGCATACCGAAAGATCAATCGGGCAAAATAACCATGAGCAGCTACGATATTATA 452
Query 68139 AGTCTCTTCTTCTTGACCGA 68158
||| ||||| ||||||||||
Sbjct 453 AGTTTCTTCCTCTTGACCGA 472
>seq15646
Length=30608
Score = 215 bits (238), Expect = 6e-51
Identities = 223/292 (76%), Gaps = 0/292 (0%)
Strand=Plus/Plus
Query 66586 ATTAAAGTGCATTACCACGGGGCAGAACTTCTTCTGGGAATACAAAGTTTTCATGCGGTT 66645
||||||| || || |||||||| ||||| || || ||||||| || ||||||||| || |
Sbjct 23752 ATTAAAGAGCGTTTCCACGGGGTAGAACCTCCTCAGGGAATATAAGGTTTTCATGAGGCT 23811
Query 66646 GATCGATAGGTGCCAACCATGCACGAAGACCTTCATTCAATAGAATGTTCTTTGTGTAGA 66705
|||| || |||| ||| ||||||| |||||| || || ||||| || || |||||||
Sbjct 23812 GATCTTGAGCCGCCATCCAAGCACGAATACCTTCGTTTAAAAGAATATTTTTGGTGTAGA 23871
Query 66706 ACGTCTCGAACTCTGGGTCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCAC 66765
| ||||| || || || ||||| ||||| | ||| || ||||| || |||||||| ||||
Sbjct 23872 AAGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCAC 23931
Query 66766 GAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCAAAGACCCATAACAGGAA 66825
| ||||| ||||| ||||| | | || | | ||| |||| | ||| | || || |
Sbjct 23932 GTAGGTTCAGAGCCAGACCGACTACTCCAAGAGCACTCATCCATAAACCGGTTACTGGTA 23991
Query 66826 CAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAACGCAATACCAAA 66877
|||| |||||||||||||| ||||| | |||||| ||| |||| |||||
Sbjct 23992 CAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACCCCAAA 24043
Score = 140 bits (154), Expect = 4e-28
Identities = 253/365 (69%), Gaps = 4/365 (1%)
Strand=Plus/Plus
Query 67208 GAACGCAATAGCATTGTAGGGACGGATACCGATGAGA-CGTGCCAGTTCAAACTGGCGAA 67266
||| || || ||||| || || || | | || ||| || || |||||||| || || |
Sbjct 24045 GAATGCGATTGCATTATAAGGTCGCA-ATTGAACAGATCGCGCAAGTTCAAATTGACGTA 24103
Query 67267 GCATGAAACCAATTAGAGCGAAAGCCCCGTGGAGCGCCACAAAATTCCAGAGTCCTCCAA 67326
||| ||||| ||||| ||||||| |||||||| || ||||| |||| || || || |
Sbjct 24104 ACATAAAACCTATTAGTCCGAAAGCGCCGTGGAGAGCAACAAATGTCCACAGACCGCCTA 24163
Query 67327 GTTGGATCCAGCGGACGAAATCCCCCTGAGACTCAGGACCCCAAAGTAGAAGAAGAGAAT 67386
||| ||| || ||||| || || | ||||||||||| |||| | | |||||
Sbjct 24164 ATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGACCCCATAGTAACAACAAAGAAT 24223
Query 67387 GACCCATAGCATCAGCAGGCGTTGACACAGCCGCTGTGAGAAAATTAGCA-CCCTCAAGA 67445
| | | | || |||||| || || || || || || | ||||| ||| || || | |
Sbjct 24224 GCGCTAAACTATTAGCAGGAGTCGAAACTGCGGCGGTTAAGAAATT-GCAGCCTTCCAAA 24282
Query 67446 TAACTAGACGCGAGTCCGTGAGTGTACCAGCTTGTGACAAACGTAGTACCAGTAAGCCAG 67505
|| | || | ||| ||||| ||||| || ||||| || ||||| |||| |||
Sbjct 24283 TAGGAACTGGCCAATCCATGAGTATACCACGAAGTTACAAAGGTTGTACCTGTAAACCAA 24342
Query 67506 CCACCAATTGCCATATAAGCAGTGGGAAAAAGAAGTAGTCCAGACCAACCCACAAAGACA 67565
|| || | || | ||| ||| ||||| || | ||| || |||||||| ||||| ||
Sbjct 24343 CCCCCTAAAGCGAAATAGGCACAAGGAAAGAGCAATAGGCCGGACCAACCTACAAAAACG 24402
Query 67566 AAGCG 67570
|| ||
Sbjct 24403 AAACG 24407
>seq695
Length=285002
Score = 199 bits (220), Expect = 5e-46
Identities = 328/469 (70%), Gaps = 3/469 (1%)
Strand=Plus/Plus
Query 68331 GTTGAAAGTACCAGAAATGCCGAGAGGCATTGCGTCAGAGAACGAACCTTGACCGAAAGG 68390
|||||||||| |||| || || | |||||| | ||||| || |||||||||| ||
Sbjct 40651 GTTGAAAGTATCAGAGATTCCTAAAGGCATACCATCAGAAAAATTCCCTTGACCGATTGG 40710
Query 68391 ATAGACCAGGAAGACTGCGGATGCTGCTGCAACAGGTGCAGAGTATGCAACACAGATCCA 68450
||||| || ||| || | | | ||||||| ||| | || ||||||| | |||||
Sbjct 40711 ATAGATCAAGAAAACAGTAGTAGTAGCTGCAATAGGAGTTGAATATGCAATAGCAATCCA 40770
Query 68451 AGGACGCATACCAAGACGATAGGAAAGTTCCCATTCACGTCCCATGTATGCAAAGATACC 68510
||| ||||||| ||| | | ||||||| | ||||| || ||||| | | |||
Sbjct 40771 AGGGTGCATACCTAGATGGAAACTAAGTTCCAACTCACGACCTATGTAACAAGCTACACC 40830
Query 68511 AATCAGGAAGTGAAAGATTACGAGTTGGAAAGGACCACCATTGTACAACCACTCATCAAG 68570
|| | |||||| || | | | | ||||||| |||||||| | ||| |||||||
Sbjct 40831 AAGTAAGAAGTGTAAAACAATTAACTCATAAGGACCGCCATTGTATA-CCATTCATCAAC 40889
Query 68571 GGTTGCTGCTTCCCAAATGGGATAAAAGTGAAGACCAATTGCATTTGAACTAGGAACAAC 68630
|| ||| |||||||| || | |||||| | | |||||| | ||| || ||| ||
Sbjct 40890 GGATGCCGCTTCCCAGATCTGGTAAAAGAGCAAACCAATAACTACAGAAGTAAGAATAAT 40949
Query 68631 AGCACCAGAAATGATGTTGTTACCATACAGAAGTGAACCAGCAACAGGTTCACGAATACC 68690
|||||||||| || ||||| || || || || || |||| || |||||||||||||||
Sbjct 40950 GACACCAGAAATAATTTTGTTTCCGTAAAGTAGAGATCCAGAAATAGGTTCACGAATACC 41009
Query 68691 ATCGATGTCCACAGGGGGAGCAGCGATGAAGGCGACGATGAAACAGATGGTTGCTG-CAA 68749
||| || || | | ||||||| || ||| ||| || || | | ||||| | |||
Sbjct 41010 ATCAATATCTATTAGAAGAGCAGCAATAAAGACGATAATAAATAAAAAAGTTGCGGTCAA 41069
Query 68750 GCAGCGTAGGGATCATCAGGACGCCGAACCAACCAACGTAAAGGCGGTT 68798
|| ||||||||||| | || | ||||| | | ||||| || ||
Sbjct 41070 TAAG-GTAGGGATCATTAAAACAACAAACCATCTGATATAAAGACGATT 41117
>seq369
Length=444201
Score = 196 bits (216), Expect = 5e-45
Identities = 237/323 (73%), Gaps = 0/323 (0%)
Strand=Plus/Minus
Query 66657 GCCAACCATGCACGAAGACCTTCATTCAATAGAATGTTCTTTGTGTAGAACGTCTCGAAC 66716
|||| ||| ||||||| ||| | || || | ||| || || ||||||| |||| ||
Sbjct 343070 GCCATCCAAGCACGAATACCATAGTTTAAAACAATATTTTTGGTGTAGACAGTCTTAAAA 343011
Query 66717 TCTGGGTCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGGTTGAGA 66776
|| | ||||| ||||| | ||| || ||||| || ||||||| ||||| ||||| |||
Sbjct 343010 TCAAGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATGGGCACGTAGGTTAAGA 342951
Query 66777 GCAAGACCAATAATACCGATGGAACTTGTCCAAAGACCCATAACAGGAACAAACAACATA 66836
|| ||||||| | || | | ||| |||| | || | || || ||||| ||||||
Sbjct 342950 GCCAGACCAACTACTCCAAGAGCACTCATCCATAAGCCGGTTACTGGTACAAATAACATA 342891
Query 66837 AAGAAATGCAACCACCTCTTATTGCTAAACGCAATACCAAAGATCTGAGACCAGAAGCGG 66896
|||||||| ||||| | ||| || ||| |||| | |||||| || ||||| ||||||
Sbjct 342890 AAGAAATGTAACCAACGTTTAATGGAAAAAGCAACCCAAAAGATTTGGGACCAAAAGCGG 342831
Query 66897 TTTGCAGTAACCATTGAGTAAGTTTCTTCCTCTTGAGTAGAGTCGAATGCTTTGAAAGTG 66956
|| || || |||||||| ||||||||||| ||||||| | || || || || |||
Sbjct 342830 TTAGCGGTGACCATTGAATAAGTTTCTTCGGCTTGAGTTGGGTTAAAAGCACGAAATGTG 342771
Query 66957 TTTGCTTGTTCACCATCTTCATA 66979
||||| ||||||||| ||||
Sbjct 342770 TTTGCACCATCACCATCTCCATA 342748
>seq3386
Length=136654
Score = 176 bits (194), Expect = 5e-39
Identities = 394/591 (67%), Gaps = 28/591 (5%)
Strand=Plus/Plus
Query 68110 AAGTATCCATGTGCAGCAACAATGTTGTAAGTCTCTTCT-TCTTGACCGAACTTGTAACC 68168
|| || ||||| ||||| | || || ||||| | ||| ||||||| ||| |||||||
Sbjct 67434 AAATAACCATGAGCAGCTATGATATTATAAGTTTTTTCCCTCTTGACTGAATCTGTAACC 67493
Query 68169 ATAGTTCTGGGACTCAGTTTCAGTGGTTTCACGAACCAGTGAAGAAGTAACCAGGGAACC 68228
| || | ||| ||| ||||||| | | || ||| || |||| ||| |
Sbjct 67494 TTCATTAATAAATTCATTTTTTGTGGTTTTCCTGATCAAACTAGAGGTTACCAAAGAATC 67553
Query 68229 ATGCATTGCACTGAACAGAGATCCACCAAATACGCCAGCAACGCCGAGCATATGGAAGGG 68288
|||||| || |||| || || | ||||| | ||| | || | ||| || || ||
Sbjct 67554 ATGCATAACATTGAATAGGGAGTTGTCGAATACACTAGCTATGCTTAACATGTGAAATGG 67613
Query 68289 GTGCATCAGGATGTTGTGCTCTGCTTGGAACACCAGCATGTAGTTGAAAGTACCAGAAAT 68348
|||||| | ||||| | || || ||||| || | |||| | ||||||||| |||| ||
Sbjct 67614 GTGCATAAAGATGT---GTTCAGCCTGGAATACAACCATGAAATTGAAAGTAACAGAGAT 67670
Query 68349 GCCGAGAGGCATTGCGTCAGAGAACGAAC---CTTGACCGAAAGGATAGACCAGGAAGAC 68405
| || |||| | ||||| || ||| ||||| ||| ||||||| | ||| ||
Sbjct 67671 TCTTAGGAGCATACCATCAGAAAA--AACTTCCTTGATCGATTGGATAGATTAAGAAAAC 67728
Query 68406 TGCGGATGCTGCTGCAACAGGTGCAGAGTATGCAACACAGATCCAAGGACGCATACCAAG 68465
| || || ||||||||||| | || ||||||||| ||||||| |||||||| ||
Sbjct 67729 AGTGGTAGCAGCTGCAACAGGAGTTGAATATGCAACAGCGATCCAATAGCGCATACCTAG 67788
Query 68466 ACGATAGGAAAGTTCCCATTCACGTCCCATGTATGCAAAGATACCAATCAGGAAGTGAAA 68525
|| |||| ||||| || | | ||||| | |||||| ||
Sbjct 67789 AC------------------CACGACCCATATAACAAGCTACACCAAGTAAGAAGTGTAA 67830
Query 68526 GATTACGAGTTGGAAAGGACCACCATTGTACAACCACTCATCAAGGGTTGCTGCTTCCCA 68585
| | | | || |||| |||||| | ||||| || |||| || || | ||| |
Sbjct 67831 AACAATTAACTCATAAAGACCGCCATTGCATAACCATTCGTCAACGGATGTCGATTCTAA 67890
Query 68586 AATGGGATAAAAGTGAAGACCAATTGCATTTGAACTAGGAACAACAGCACCAGAAATGAT 68645
|| || ||||| || | |||||| || ||| | ||| || |||||| |||| ||
Sbjct 67891 GATCGGGTAAAAATGCAAACCAATAGCTGCAGAAGTCAGAATAATGGCACCAAAAATAAT 67950
Query 68646 GTTGTTACCATACAGAAGTGAACCAGCAACAGGTTCACGAATACCATCGAT 68696
| |||| || || || || || | | ||||||||||||||||||||| ||
Sbjct 67951 G-TGTTTCCGTAAAGTAGAGATCTAAAAACAGGTTCACGAATACCATCAAT 68000
>seq9889
Length=72821
Score = 152 bits (168), Expect = 6e-32
Identities = 275/397 (69%), Gaps = 4/397 (1%)
Strand=Plus/Minus
Query 67197 ATAGGACCAGAGAACGCAATAGCATTGTAGGGACGGATACCGATGAGA-CGTGCCAGTTC 67255
|| ||||||||||| || || ||||| || || || | | || ||| || | |||||
Sbjct 45442 ATTGGACCAGAGAATGCGATTGCATTATAAGGTCGCA-ATTGAACAGATCGCACAAGTTC 45384
Query 67256 AAACTGGCGAAGCATGAAACCAATTAGAGCGAAAGCCCCGTGGAGCGCCACAAAATTCCA 67315
||| || || | ||| ||||| ||||| ||||||| |||||||| || ||||| ||||
Sbjct 45383 AAATTGACGTAACATAAAACCTATTAGTCCGAAAGCGCCGTGGAGAGCAACAAATGTCCA 45324
Query 67316 GAGTCCTCCAAGTTGGATCCAGCGGACGAAATCCCCCTGAGACTCAGGACCCCAAAGTAG 67375
|| || || | ||| ||| || ||||| || || | ||||||||||| ||||
Sbjct 45323 CAGACCGCCTAATTGACACCAACGAGTAAAATCTCCTTGTGCTTCAGGACCCCATAGTAA 45264
Query 67376 AAGAAGAGAATGACCCATAGCATCAGCAGGCGTTGACACAGCCGCTGTGAGAAAATTAGC 67435
| | |||||| | | | || |||||| || || || || || || | ||||| ||
Sbjct 45263 CAACAAAGAATGCGCTAAACTATTAGCAGGAGTCGAAACTGCGGCGGTTAAGAAATT-GC 45205
Query 67436 A-CCCTCAAGATAACTAGACGCGAGTCCGTGAGTGTACCAGCTTGTGACAAACGTAGTAC 67494
| || || | ||| | || | ||| ||||| ||||| || ||||| || ||||
Sbjct 45204 AGCCTTCCAAATAGGAACTGGCCAATCCATGAGTATACCACGAAGTTACAAAGGTTGTAC 45145
Query 67495 CAGTAAGCCAGCCACCAATTGCCATATAAGCAGTGGGAAAAAGAAGTAGTCCAGACCAAC 67554
| |||| ||| || || | || | ||| ||| ||||| || | ||| || |||||||
Sbjct 45144 CTGTAAACCAACCCCCTAAAGCGAAATAGGCACAAGGAAAGAGCAATAGGCCGGACCAAC 45085
Query 67555 CCACAAAGACAAAGCGATCTCGTTTAAGCCAGTCATC 67591
| ||||| || || || || | | |||||||||
Sbjct 45084 CTACAAAAACGAAACGGTCCCTACGTAACCAGTCATC 45048
>seq7993
Length=73198
Score = 150 bits (166), Expect = 2e-31
Identities = 215/305 (70%), Gaps = 12/305 (4%)
Strand=Plus/Minus
Query 66748 ATACAAAGTCATAAGCACGAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCC 66807
||| | || |||| ||||| ||||| ||||| ||||| | | || |||
Sbjct 57452 ATATATAGACATAGGCACGTAGGTTTAGAGCCAGACCGAGA------------CTCATCC 57405
Query 66808 AAAGACCCATAACAGGAACAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAACG 66867
| | ||| | ||| | ||||| |||||||||||||| ||||| | |||||| ||| |
Sbjct 57404 ATAAACCGGTTACAAGTACAAATAACATAAAGAAATGTAACCAACGTTTATTGGAAAAAG 57345
Query 66868 CAATACCAAAGATCTGAGACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTTCCT 66927
||| ||||||| || |||| ||| | || || || |||||||| |||||||||||
Sbjct 57344 CAACCTCAAAGATTTGGTACCAAAAGTGATTAGCGGTGACCATTGAATAAGTTTCTTCGG 57285
Query 66928 CTTGAGTAGAGTCGAATGCTTTGAAAGTGTTTGCTTGTTCACCATCTTCATACAGAGTAT 66987
||||||| ||| || | || || ||||| |||||||||||| | | |||||
Sbjct 57284 CTTGAGTTAAGTTAAAAACACGAAATGTATTTGCACCATCACCATCTTCAAATAAAGTAT 57225
Query 66988 TCTCTACTGTAACACCATGAATGGCAGAAAGCAATGCACCACCCAGGATACCTGCTACAC 67047
||||||| ||| |||||||||| | | |||| || |||||| | || || || |
Sbjct 57224 TCTCTACGGTAGCACCATGAATAACGCATAGCAGAGCCGCACCCAATACACTGGCAACTC 57165
Query 67048 CCATC 67052
|||||
Sbjct 57164 CCATC 57160
>seq16704
Length=14366
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 35511 CTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGCTCTGCCGCTG 35570
||||||| |||||||||||||||||||||| || ||||||| ||| ||||| || |||
Sbjct 12694 CTCCCCAAGTAGGATTTGAACCTACGACCAGTCAGTTAACAGCCGACCGCTCTACCACTG 12753
Query 35571 AGCTACTGAGGA 35582
||||||||||||
Sbjct 12754 AGCTACTGAGGA 12765
>seq869
Length=261632
Score = 89.7 bits (98), Expect = 6e-13
Identities = 117/162 (72%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 67041 GCTACACCCATCATATGAAACGGGTTCAAGGTCCAGTTATGGAATCCTTGTAGGAAGAGA 67100
|| || || ||||||| ||| | |||||| || || ||||| |||| ||| | |||||
Sbjct 195872 GCAACTCCAATCATATAAAATGAGTTCAATGTTCAATTATGAAATCATTGAAAAAAGAGG 195813
Query 67101 AGGAATCGAAAGATTGCTGAGACCCCGAAAGATGGAGCGAAAAACCAACTCGATTGACCC 67160
| ||||||||| || ||| || | ||| || | || |||||| |||||| |
Sbjct 195812 ATGAATCGAAATATAGCTTTTACATCAAAATTGGGCACAAAGAACCAATCAGATTGATCT 195753
Query 67161 AGAGGGTAGATGAGAAAGACACTAACAAAAACAGCGATAGGA 67202
|| || || || ||||| ||| |||||||||||| || |||
Sbjct 195752 AGTGGATAAATTAGAAATACAGAAACAAAAACAGCAATTGGA 195711
>seq817
Length=266615
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 35511 CTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGCTCTGCCGCTG 35570
|| |||| |||||||||||||||||||||| || ||||||| |||| ||||| || |||
Sbjct 220181 CTGCCCATGTAGGATTTGAACCTACGACCAGTCAGTTAACAGCCGATCGCTCTACCTCTG 220240
Query 35571 AGCTACTGAGGA 35582
||||||||||||
Sbjct 220241 AGCTACTGAGGA 220252
>seq130
Length=620044
Score = 87.8 bits (96), Expect = 2e-12
Identities = 69/82 (84%), Gaps = 2/82 (2%)
Strand=Plus/Plus
Query 35501 AATCATATAACTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGC 35560
|||||||| ||| || |||||||| ||||||||||||| || |||||||| ||| ||
Sbjct 47636 AATCATAT--CTCTTCAAGTAGGATTCGAACCTACGACCAGTCAATTAACAGCCGACCGC 47693
Query 35561 TCTGCCGCTGAGCTACTGAGGA 35582
||| |||||||| |||||||||
Sbjct 47694 TCTACCGCTGAGTTACTGAGGA 47715
>seq1349
Length=219574
Score = 84.2 bits (92), Expect = 2e-11
Identities = 131/185 (71%), Gaps = 2/185 (1%)
Strand=Plus/Minus
Query 67134 GGAGCGAAAAACCAACTCGATTGACCCAGAGGGTAGATGAGAAAGACACTAACAAAAACA 67193
|| || || || |||| || ||||| || || || || | || ||| ||||||||||
Sbjct 71559 GGCGCAAAGAATCAACCAGACTGACCTAGTGGATAAATCAAGAATACAGAAACAAAAACA 71500
Query 67194 GCGATAGGACCAGAGAACGCAATAGCATTGTAGGGACGGATACCGATGAGA-CGTGCCAG 67252
|| || ||||||||||| || || ||||| || || | | || ||| || | |
Sbjct 71499 GCAATTGGACCAGAGAATGCGATTGCATTATAAGG-TGTCAATTGAATAGATCGCACAAA 71441
Query 67253 TTCAAACTGGCGAAGCATGAAACCAATTAGAGCGAAAGCCCCGTGGAGCGCCACAAAATT 67312
|||||| || | | || ||||| ||||| ||||||| |||| ||| || ||||| |
Sbjct 71440 TTCAAATTGACTTAACACAAAACCTATTAGTCCGAAAGCGCCGTTGAGAGCAACAAATAT 71381
Query 67313 CCAGA 67317
|||||
Sbjct 71380 CCAGA 71376
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571500308108160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |