Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hibiscus_20syriacus_20[genbank_20GCA_5F001696755.1_202016-07-29]
77,488 sequences; 1,748,252,795 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq8977 111 1e-19
seq3059 104 2e-17
seq10 98.7 8e-16
seq9927 96.9 3e-15
seq1833 95.1 1e-14
seq4679 93.3 3e-14
seq1260 93.3 3e-14
seq7493 91.5 1e-13
seq9733 89.7 4e-13
seq7474 89.7 4e-13
seq5974 89.7 4e-13
seq3224 89.7 4e-13
seq1278 89.7 4e-13
seq10551 87.8 1e-12
seq819 87.8 1e-12
seq14711 86.0 5e-12
seq11709 86.0 5e-12
seq5138 86.0 5e-12
seq2108 84.2 2e-11
seq12554 82.4 6e-11
seq9595 82.4 6e-11
>seq8977
Length=60439
Score = 111 bits (122), Expect = 1e-19
Identities = 159/224 (71%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| ||||||||||| | || || || || |||||| |||| ||| |
Sbjct 30355 ATGCAAATCTTTGTCAAAACCCTGACTGGGAAGACTATTACCCTCGAGGTTGAGAGTTCT 30296
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || ||| | | ||||| |||||| ||| | ||| | | || |||||
Sbjct 30295 GACACCATCGACAACGTAAAGGCAAAGATTCAAGACTAGGAAAGGATCCCACCTGATCAG 30236
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||||| ||||||| ||| || ||||||||||| |||| | | || | || |||||||||
Sbjct 30235 CAAAGGCTTATTTTTGCTGGAAAACAGCTGGAAGATGGCCGTACCCTAGCTGATTACAAC 30176
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGG 110496
|||||||| |||||||| | ||| | ||| | | || |||||
Sbjct 30175 ATTCAAAAGGAATCTACCCTCCACCTAGTGCTCCGCCTTCGAGG 30132
>seq3059
Length=143113
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| |||||||||||||| || || || ||||| |||||| |||| ||||
Sbjct 1976 ATGCAGATATTTGTCAAAACCTTGACGGGAAAAACAATTACCCTCGAGGTGGAGAGCTCG 1917
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| ||| | | || || || ||| || |||||||| | || |||||||
Sbjct 1916 GATACGATCGACAACGTGAAGGCTAAAATTCAGGATAAAGAAGGGATCCCTCCGGATCAA 1857
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || | || | || || || ||||||||||| | ||| ||| | || ||||||||
Sbjct 1856 CAGAGGTTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCAGGACACTTGCAGATTACAAT 1797
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|| || ||||| ||||| | ||| | ||| | || || || || ||
Sbjct 1796 ATCCAGAAAGAGTCTACTCTCCACCTTGTGCTGAGGCTTCGTGGAGG 1750
>seq10
Length=577822
Score = 98.7 bits (108), Expect = 8e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| || |||||||| || |||||||||||||| ||| |||| ||| | |
Sbjct 543187 ATGCAAATCTTCGTCAAAACCTTGACCGGCAAAACCATAACCCTCGAGGTCGAGAGTTCC 543128
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || ||| | | || || || ||| |||||||||||| | || || ||
Sbjct 543127 GACACCATCGACAACGTTAAGGCCAAAATTCAAGACAAAGAAGGCATCCCACCCGACCAG 543068
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||| | || || | || || ||||||||||| || | | | || |||||||||| ||
Sbjct 543067 CAACGCCTCATCTTCGCCGGCAAACAGCTGGAAGACGGCCGTACCTTGGCGGATTATAAT 543008
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501
|| || || ||||| || | ||| | || | || || || || ||||
Sbjct 543007 ATCCAGAAGGAATCGACTCTTCACCTTGTTCTGAGGCTTCGTGGAGGAA 542959
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331
|||||| |||||||| || || || ||||||||||| || ||| | || ||| |
Sbjct 542960 AATGCAGATATTTGTGAAGACATTGACCGGCAAAACAATCACCTTGGAGGTGGAAAGTTC 542901
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
||||| | | | || || ||||||| || || ||||| | ||| |||||
Sbjct 542900 TGATACAATAGATAATGTGAAGGCGAAGATTCAGGATAAGGAAGGAATCCCCCCTGATCA 542841
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
||||| ||||| | ||| || ||||| ||||||||| || || | || ||||| ||
Sbjct 542840 GCAAAGGCTTATCTTTGCAGGCAAACAATTGGAGGATGGGAGGACTTTAGCTGATTATAA 542781
Query 110452 CATTCAAAAAGAATCTAC 110469
|||||| ||||| |||||
Sbjct 542780 CATTCAGAAAGAGTCTAC 542763
Score = 96.9 bits (106), Expect = 3e-15
Identities = 170/245 (69%), Gaps = 2/245 (1%)
Strand=Plus/Minus
Query 110256 TTTATAAGAGATTTAAA-ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACC 110314
||||| | | ||| ||| ||||| || ||||| ||||| | |||||||| ||||| |||
Sbjct 543432 TTTATCA-ACATTGAAATATGCAGATCTTTGTGAAAACCCTCACCGGCAAGACCATAACC 543374
Query 110315 GTCGAAACGGAGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAA 110374
|||| ||| | ||| || ||| | | || || || || ||||||||
Sbjct 543373 CTCGAGGTCGAGAGTTCCGACACCATCGACAACGTCAAGGCCAAAATCCAAGACAAAGAG 543314
Query 110375 GGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGA 110434
||| | || || || ||| | || || | || || ||||||||||| |||| | |
Sbjct 543313 GGCATCCCACCCGACCAGCAACGCCTCATCTTCGCCGGAAAACAGCTGGAAGATGGCCGT 543254
Query 110435 ACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGA 110494
|| |||||||||||||||| || || ||||| || | ||| ||||| | | || ||
Sbjct 543253 ACCCTGGCGGATTACAACATCCAGAAGGAATCGACTCTCCACTTGGTGCTCCGTCTTCGT 543194
Query 110495 GGGGG 110499
|||||
Sbjct 543193 GGGGG 543189
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331
|||||| || ||||| || || || ||||||||||| || ||| | || ||| |
Sbjct 562177 AATGCAGATCTTTGTGAAGACATTGACCGGCAAAACAATCACCTTGGAGGTGGAAAGTTC 562118
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
||||| | | | || || ||||||| || || ||||| | ||| |||||
Sbjct 562117 GGATACGATAGATAATGTGAAGGCGAAGATTCAGGATAAGGAAGGAATCCCCCCTGATCA 562058
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
||||| ||||| | ||| || ||||| ||||||||| || || | || ||||| ||
Sbjct 562057 GCAAAGGCTTATCTTTGCAGGCAAACAATTGGAGGATGGGAGGACTTTAGCTGATTATAA 561998
Query 110452 CATTCAAAAAGAATCTAC 110469
|||||||||||| |||||
Sbjct 561997 CATTCAAAAAGAGTCTAC 561980
Score = 87.8 bits (96), Expect = 1e-12
Identities = 169/247 (68%), Gaps = 2/247 (1%)
Strand=Plus/Minus
Query 110256 TTTATAAGAGATTTAAA-ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACC 110314
||||| | | ||| ||| ||||| || ||||| ||||| | |||||||| ||||| |||
Sbjct 562421 TTTATCA-ACATTGAAATATGCAGATCTTTGTGAAAACCCTCACCGGCAAGACCATAACC 562363
Query 110315 GTCGAAACGGAGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAA 110374
|||| ||| | ||| || ||| | | || || || ||| |||||||||
Sbjct 562362 CTCGAGGTCGAGAGTTCCGACACCATCGACAACGTCAAGGCCAAAATTCAAGACAAAGAA 562303
Query 110375 GGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGA 110434
||| | || || || ||| | || || | || || ||||||||||| || | | |
Sbjct 562302 GGCATCCCACCCGACCAGCAACGCCTCATCTTCGCCGGCAAACAGCTGGAAGACGGCCGT 562243
Query 110435 ACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGA 110494
|| |||||||||| || || || || ||||| || | ||| | || | || || ||
Sbjct 562242 ACCTTGGCGGATTATAATATCCAGAAGGAATCGACTCTTCACCTTGTTCTGAGGCTTCGT 562183
Query 110495 GGGGGAA 110501
|| ||||
Sbjct 562182 GGAGGAA 562176
>seq9927
Length=49610
Score = 96.9 bits (106), Expect = 3e-15
Identities = 142/200 (71%), Gaps = 6/200 (3%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGC---CT 110329
|||||||| ||||| || ||| | || ||||| | ||| ||| |||| |||| ||
Sbjct 14206 ATGCAAATCTTTGTAAAGACTCTTACTGGCAAGATCATCACCCTCGAGGTGGAGAGCTCT 14147
Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389
||| ||| | | | | || || ||||| ||||| || ||| | || |||
Sbjct 14146 GAC---ACTATTGACAATGTTAAGGCCAAGATCCAGGACAAGGAGGGCATTCCACCAGAT 14090
Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449
|| || || ||||| | |||||||||||| || ||||||| |||||| | || || |||
Sbjct 14089 CATCAGAGGCTTATCTTTGCGGGTAAACAACTTGAGGATGGCAGAACCCTTGCTGACTAC 14030
Query 110450 AACATTCAAAAAGAATCTAC 110469
||||| || ||||| |||||
Sbjct 14029 AACATCCAGAAAGAGTCTAC 14010
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||||||||| || ||| | || || || || |||||| | ||| ||| |
Sbjct 13750 ATGCAAATATTTGTGAAGACTCTCACAGGGAAGACTATTACCTTGGAAGTAGAGAGTTCT 13691
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || | | | | || ||| ||||| ||||| ||||| | || ||||||
Sbjct 13690 GACACAATTGACAATGTTAAAACTAAGATCCAGGACAAGGAAGGGATTCCACCTGATCAA 13631
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || || |||| || || || ||||||||||||| || ||| | | ||||| ||
Sbjct 13630 CAGAGGCTGATTTTCGCTGGAAAGCAGCTGGAGGATGGGAGGACACTAGTTGATTATAAT 13571
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501
||||| || || || || | ||| |||| || | || || || ||||
Sbjct 13570 ATTCAGAAGGAGTCGACCCTCCACTTGGTCCTACGTCTTCGTGGTGGAA 13522
>seq1833
Length=187927
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || || ||||| ||||| || || |||||||||||| | ||| |||| |
Sbjct 43480 ATGCAGATCTTCGTCAAGACTTTGACTGGAAAAACCATTACCCTGGAAGTGGAGAGTTCT 43421
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| ||| | || || ||||||| ||||||||||| | ||| |||||
Sbjct 43420 GATACGATCGATAATGTTAAGGCGAAGATTCAGGACAAAGAAGGGATTCCCCCAGATCAG 43361
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||||| | |||| || || ||||| |||| |||| || || | || ||||||||
Sbjct 43360 CAAAGGTTGATTTTCGCTGGGAAACAATTGGAAGATGGAAGGACTCTTGCTGATTACAAT 43301
Query 110453 ATTCAAAAAGAATCTAC 110469
|| || || ||||| ||
Sbjct 43300 ATCCAGAAGGAATCCAC 43284
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| || |||||||| | ||||| |||||||| ||| | ||| ||| |
Sbjct 43708 ATGCAAATCTTCGTCAAAACCCTGACCGGTAAAACCATAACCTTGGAAGTCGAGAGCTCC 43649
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || ||| | | || || ||||| ||||| || ||| | || ||||||
Sbjct 43648 GACACGATCGACAACGTGAAGGCCAAGATCCAAGACAAGGAGGGCATCCCACCGGATCAG 43589
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || || || | ||| || || ||||| ||||| | | | || |||| |||||||||
Sbjct 43588 CAGAGGCTCATCTTTGCCGGAAAGCAGCTCGAGGACGGCCGGACCTTGGCCGATTACAAC 43529
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|| || || ||||| || | || |||| || || || || || ||
Sbjct 43528 ATCCAGAAGGAATCGACCCTTCATCTGGTTTTGAGGCTTCGTGGTGG 43482
>seq4679
Length=107372
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| || ||||| || | || ||||| ||||| ||| | || ||| |
Sbjct 38259 ATGCAAATTTTCGTCAAGACCCTCACTGGCAAGACCATAACCCTTGAGGTGGAAAGTTCT 38200
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| ||| | | || || ||||| ||||| || || | || || |||
Sbjct 38199 GATACAATCGACAATGTGAAGGCCAAGATCCAAGACAAGGAGGGAATCCCTCCAGACCAA 38140
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || ||||| | ||| ||||||||||||||||||| | | || | || |||||||||
Sbjct 38139 CAGAGGCTTATCTTTGCTGGTAAACAGCTGGAGGATGGCCGCACCCTTGCTGATTACAAC 38080
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481
||||| || ||||| || | ||| ||||
Sbjct 38079 ATTCAGAAGGAATCCACACTCCACTTGGT 38051
>seq1260
Length=223926
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| || ||||| || | || ||||| ||||| ||| | || ||| |
Sbjct 116029 ATGCAAATTTTCGTCAAGACCCTCACTGGCAAGACCATAACCCTTGAGGTGGAAAGTTCT 116088
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| ||| | | || || ||||| ||||| || || | || || |||
Sbjct 116089 GATACAATCGACAATGTGAAGGCCAAGATCCAAGACAAGGAGGGAATCCCTCCAGACCAA 116148
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || ||||| | ||| ||||||||||||||||||| | | || | || |||||||||
Sbjct 116149 CAGAGGCTTATCTTTGCTGGTAAACAGCTGGAGGATGGCCGCACCCTTGCTGATTACAAC 116208
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481
||||| || ||||| || | ||| ||||
Sbjct 116209 ATTCAGAAGGAATCCACACTCCACTTGGT 116237
>seq7493
Length=70190
Score = 91.5 bits (100), Expect = 1e-13
Identities = 163/237 (69%), Gaps = 1/237 (0%)
Strand=Plus/Minus
Query 110264 AGATTTAAA-ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAAC 110322
|| |||||| |||||||| || || ||||| | | |||||| ||||| || ||||
Sbjct 10502 AGCTTTAAAGATGCAAATCTTCGTGAAAACCCTCAACGGCAAGACCATAACTCTCGAGGT 10443
Query 110323 GGAGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCC 110382
||| ||| || ||| | | || || |||||| ||||| |||||| | ||
Sbjct 10442 CGAGAGATCCGACACCATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAAGGCATCCC 10383
Query 110383 CGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGC 110442
|| ||||| | || || | || || ||||||||||| || | || || ||||
Sbjct 10382 ACCCGACCAACAGCGTCTCATCTTCGCCGGAAAACAGCTGGAAGACGGAAGGACGTTGGC 10323
Query 110443 GGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||||| ||||| ||||| ||||| || | ||| | ||||| || ||||| || ||
Sbjct 10322 CGATTATAACATCCAAAAGGAATCGACCCTTCACCTTGTGTTGAGGCTGCGTGGTGG 10266
>seq9733
Length=51005
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || || ||||| ||||| || || ||||||||||| | || |||| |
Sbjct 37197 ATGCAGATCTTCGTCAAGACTTTGACTGGGAAAACCATTACTCTGGAGGTGGAGAGTTCT 37138
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| | | | || || ||||||| ||||||||||| | ||| |||||
Sbjct 37137 GATACGATTGATAATGTCAAGGCGAAGATTCAGGACAAAGAAGGGATTCCCCCAGATCAG 37078
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || | |||| ||| || ||||| |||| |||| || || |||| ||||||||
Sbjct 37077 CAGAGGTTGATTTTTGCTGGGAAACAATTGGAAGATGGAAGGACTTTGGCTGATTACAAT 37018
Query 110453 ATTCAAAAAGAATCTAC 110469
||||| || ||||| ||
Sbjct 37017 ATTCAGAAGGAATCAAC 37001
>seq7474
Length=135391
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| |||||||| ||| | ||||| || || |||||| | || ||| |
Sbjct 126678 ATGCAAATCTTTGTCAAGACTCTCACCGGAAAGACAATTACCTTGGAGGTCGAGAGTTCG 126737
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| | | | || ||| || ||| ||||||||||| | | || |||
Sbjct 126738 GATACCATTGATAATGTGAAAGCCAAAATTCAGGACAAAGAAGGAATCTCATCAGACCAA 126797
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|||||| | |||| ||| || |||||||| || |||| ||||| | || ||||| |||
Sbjct 126798 CAAAGATTGATTTTTGCAGGAAAACAGCTTGAAGATGGAAGAACTCTTGCCGATTATAAC 126857
Query 110453 ATTCAAAAAGAATCTAC 110469
|| ||||| || |||||
Sbjct 126858 ATCCAAAAGGAGTCTAC 126874
>seq5974
Length=88138
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| || || ||||| | || || || ||||| ||| |||| ||| |
Sbjct 73096 ATGCAAATTTTCGTTAAAACACTCACTGGTAAGACCATCACCCTCGAGGTGGAAAGTTCT 73037
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| ||| | | ||||| |||||| ||||| ||||| | || || |||
Sbjct 73036 GATACCATCGACAATGTAAAGGCCAAGATTCAAGACAAGGAAGGAATCCCACCAGACCAA 72977
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| ||| | || | ||| ||||||||||||||||||| | | || | || || || |||
Sbjct 72976 CAGAGATTGATCTTTGCTGGTAAACAGCTGGAGGATGGCCGTACTCTTGCCGACTATAAC 72917
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481
|| || || ||||| || | ||| ||||
Sbjct 72916 ATCCAGAAGGAATCCACACTCCACTTGGT 72888
>seq3224
Length=148195
Score = 89.7 bits (98), Expect = 4e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || ||||| ||||| | || ||||| || || ||| | || |||| |
Sbjct 66599 ATGCAGATCTTTGTGAAAACCCTTACGGGCAAGACAATCACCCTTGAGGTGGAGAGCTCC 66658
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| ||| ||| | || || ||||| ||||| || ||| | || || ||
Sbjct 66659 GACACTATCGATAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATACCACCAGACCAG 66718
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || ||||| | ||| || ||||| || ||||||| | ||| | || |||||||||
Sbjct 66719 CAGAGGCTTATCTTTGCTGGGAAACAACTTGAGGATGGTCGTACACTTGCTGATTACAAC 66778
Query 110453 ATTCAAAAAGAATCTACGTTGCAC 110476
||||| ||||| ||||||||||||
Sbjct 66779 ATTCAGAAAGAGTCTACGTTGCAC 66802
>seq1278
Length=225562
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || || ||||||||||| ||||| ||||||||||| | || |||| |
Sbjct 157848 ATGCAGATCTTCGTCAAAACTTTGACCGGGAAAACCATTACTCTGGAGGTGGAGAGTTCT 157907
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| | | | || || ||||||| ||||||||||| | ||| || ||
Sbjct 157908 GATACGATTGATAATGTCAAGGCGAAGATTCAGGACAAAGAAGGGATTCCCCCAGACCAG 157967
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || | |||| || || ||||| |||| |||| || || |||| ||||||||
Sbjct 157968 CAGAGGTTGATTTTCGCTGGGAAACAATTGGAAGATGGAAGGACTTTGGCTGATTACAAT 158027
Query 110453 ATTCAAAAAGAATCTAC 110469
|| ||||| ||||| ||
Sbjct 158028 ATACAAAAGGAATCCAC 158044
>seq10551
Length=45279
Score = 87.8 bits (96), Expect = 1e-12
Identities = 140/200 (70%), Gaps = 6/200 (3%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGC---CT 110329
||||| || ||||| || ||| | || ||||| ||||| ||| |||| |||| ||
Sbjct 34813 ATGCAGATCTTTGTGAAGACTCTTACTGGCAAGACCATCACCCTCGAGGTGGAGAGCTCT 34872
Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389
||| ||| | | | | || || ||||| || || || ||| | || |||
Sbjct 34873 GAC---ACTATTGACAATGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCACCAGAT 34929
Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449
|| || || || || | |||||||||||| || ||||||| |||||| | || || |||
Sbjct 34930 CAGCAGAGGCTAATCTTTGCGGGTAAACAACTTGAGGATGGCAGAACCCTTGCTGACTAC 34989
Query 110450 AACATTCAAAAAGAATCTAC 110469
||||| || |||||||| ||
Sbjct 34990 AACATCCAGAAAGAATCAAC 35009
>seq819
Length=264122
Score = 87.8 bits (96), Expect = 1e-12
Identities = 86/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 110366 GACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAG 110425
||||||||||| | || |||| ||||| || ||||| | ||| ||||||||||| | |
Sbjct 12523 GACAAAGAAGGGATCCCTCTGGACCAACAGAGGCTTATCTTTGCCGGTAAACAGCTAGTG 12464
Query 110426 GATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCAC 110476
|||| |||||| | || || ||||| || |||||||| || || |||||
Sbjct 12463 GATGACAGAACCCTTGCCGACTACAATATCCAAAAAGAGTCCACCCTGCAC 12413
>seq14711
Length=21231
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| |||||||| ||| | || || || || |||||| | || ||| |
Sbjct 4841 ATGCAAATCTTTGTCAAGACTCTTACTGGAAAGACAATTACCTTGGAGGTTGAGAGTTCA 4900
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| | | | || ||| || ||| ||||||||||| | || || |||
Sbjct 4901 GATACCATTGATAATGTGAAAGCCAAAATTCAGGACAAAGAAGGAATTCCACCAGACCAA 4960
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|||||| | |||| ||| || |||||||| || |||| ||||| | || ||||| ||
Sbjct 4961 CAAAGATTGATTTTTGCAGGAAAACAGCTTGAAGATGGAAGAACTCTTGCCGATTATAAT 5020
Query 110453 ATTCAAAAAGAATCTAC 110469
|| ||||| || |||||
Sbjct 5021 ATCCAAAAGGAGTCTAC 5037
>seq11709
Length=37133
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || || |||||||| | |||||||||||||| ||| | ||| ||| |
Sbjct 7974 ATGCAGATCTTCGTCAAAACCCTCACCGGCAAAACCATAACCTTGGAAGTCGAGAGCTCC 7915
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || ||| | | || || ||||| ||||| ||||| | || ||| ||
Sbjct 7914 GACACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGGATTCCACCGGACCAG 7855
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || || || | || || |||||||| ||||| | | | || |||| |||||||||
Sbjct 7854 CAGAGGCTCATATTCGCCGGAAAACAGCTCGAGGACGGCCGGACTTTGGCCGATTACAAC 7795
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|| || || ||||| || | || |||| || || || || || ||
Sbjct 7794 ATCCAGAAGGAATCGACCCTTCATCTGGTTTTGAGGCTTCGTGGTGG 7748
>seq5138
Length=101594
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || || |||||||| | || || || ||||| ||| | || ||| ||
Sbjct 53626 ATGCAGATCTTCGTCAAAACCCTGACGGGGAAGACCATAACCCTAGAGGTCGAGTCTTCT 53567
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || ||| | | || ||| |||||| |||||||||||| | || || |||
Sbjct 53566 GACACCATCGACAATGTCAAATCCAAGATTCAGGACAAAGAAGGCATTCCACCTGACCAA 53507
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||| | || || | ||| || || ||||| ||||||| | | || | || || ||||||
Sbjct 53506 CAACGCCTCATCTTTGCCGGGAAGCAGCTCGAGGATGGCCGCACCTTAGCCGACTACAAC 53447
Query 110453 ATTCAAAAAGAATCTAC 110469
|| || || ||||||||
Sbjct 53446 ATCCAGAAGGAATCTAC 53430
>seq2108
Length=174870
Score = 84.2 bits (92), Expect = 2e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 110366 GACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAG 110425
||||||||||| | || || |||||||| ||||| | ||| ||||||||||| |||
Sbjct 61669 GACAAAGAAGGGATCCCTCCAGACCAACAAAGGCTTATCTTTGCCGGTAAACAGCTAGAG 61610
Query 110426 GATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCAC 110476
|||| |||||| | || || ||||| || || ||||| || || |||||
Sbjct 61609 GATGGCAGAACTCTTGCTGACTACAATATCCATAAAGAGTCCACCCTGCAC 61559
>seq12554
Length=32302
Score = 82.4 bits (90), Expect = 6e-11
Identities = 139/200 (70%), Gaps = 1/200 (1%)
Strand=Plus/Minus
Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329
|| |||||||| || |||||||| |||| || || ||||| ||| | || ||| ||
Sbjct 15393 AAGATGCAAATCTTCGTCAAAACCCTAACGGGTAAGACCATAACCCTAGAGGTTGAGTCT 15334
Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389
||| ||| ||| | | || || |||||| |||||||||||| | || |||
Sbjct 15333 TCCGACACTATCGACAATGTCAAGGCTAAGATTCAGGACAAAGAAGGCATCCCACCGGAC 15274
Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449
|| ||| | ||||| | || || || ||||| || || | | | || | || || |||
Sbjct 15273 CAGCAACGCCTTATCTTCGCCGGAAAGCAGCTCGAAGACGGC-GCACCTTAGCCGACTAC 15215
Query 110450 AACATTCAAAAAGAATCTAC 110469
||||| || ||||| || ||
Sbjct 15214 AACATCCAGAAAGAGTCCAC 15195
>seq9595
Length=52040
Score = 82.4 bits (90), Expect = 6e-11
Identities = 138/200 (69%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329
|| ||||| || || ||||||||| | || || || ||||| ||| | || ||| ||
Sbjct 11064 AAGATGCAGATCTTCGTCAAAACTCTGACGGGGAAGACCATAACCCTAGAGGTCGAGTCT 11123
Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389
||| || ||| | | || ||| |||||| ||||||||||| | || ||
Sbjct 11124 TCCGACACCATCGACAATGTCAAAGCTAAGATTCAAGACAAAGAAGGAATTCCACCTGAC 11183
Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449
|||||| | || || | || || || ||||||||||| | | | || | || || |||
Sbjct 11184 CAACAACGCCTCATCTTCGCCGGGAAGCAGCTGGAGGACGGCCGCACCTTAGCCGACTAC 11243
Query 110450 AACATTCAAAAAGAATCTAC 110469
||||| || || ||||| ||
Sbjct 11244 AACATCCAGAAGGAATCCAC 11263
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412451718585584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |